RNA–Protein interactions for RNA: ENST00000430898.1

LINC00222-205, long intergenic non-protein coding RNA 222, humanhuman

TSL 3

Gene LINC00222, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-205ENST00000430898 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
LINC00222-205ENST00000430898 CHIC1Q5VXU3 224 aa14.73□□□□□ -0.05
LINC00222-205ENST00000430898 AEBP2Q6ZN18 517 aaPredicted RBP14.32□□□□□ -0.12
LINC00222-205ENST00000430898 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
LINC00222-205ENST00000430898 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
LINC00222-205ENST00000430898 DCAF1Q9Y4B6 1507 aa13.41□□□□□ -0.26
LINC00222-205ENST00000430898 SHROOM4Q9ULL8 1493 aa13.33□□□□□ -0.28
LINC00222-205ENST00000430898 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
LINC00222-205ENST00000430898 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
LINC00222-205ENST00000430898 SUPT5HO00267 1087 aaKnown RBP13.11□□□□□ -0.31
LINC00222-205ENST00000430898 PHF23Q9BUL5 403 aaPredicted RBP13.07□□□□□ -0.32
LINC00222-205ENST00000430898 NACADO15069 1562 aa12.87□□□□□ -0.35
LINC00222-205ENST00000430898 ABCC9O60706 1549 aa12.77□□□□□ -0.37
LINC00222-205ENST00000430898 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
LINC00222-205ENST00000430898 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
LINC00222-205ENST00000430898 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
LINC00222-205ENST00000430898 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
LINC00222-205ENST00000430898 BAZ1AQ9NRL2 1556 aaPredicted RBP12.44□□□□□ -0.42
LINC00222-205ENST00000430898 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
LINC00222-205ENST00000430898 MROH2BQ7Z745 1585 aa12.41□□□□□ -0.42
LINC00222-205ENST00000430898 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
LINC00222-205ENST00000430898 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
LINC00222-205ENST00000430898 PLPPR3Q6T4P5 718 aa12.3□□□□□ -0.44
LINC00222-205ENST00000430898 WIZO95785 1651 aa12.27□□□□□ -0.45
LINC00222-205ENST00000430898 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
LINC00222-205ENST00000430898 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
LINC00222-205ENST00000430898 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
LINC00222-205ENST00000430898 HRCP23327 699 aa12.19□□□□□ -0.46
LINC00222-205ENST00000430898 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
LINC00222-205ENST00000430898 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
LINC00222-205ENST00000430898 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
LINC00222-205ENST00000430898 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
LINC00222-205ENST00000430898 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.46
LINC00222-205ENST00000430898 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
LINC00222-205ENST00000430898 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
LINC00222-205ENST00000430898 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
LINC00222-205ENST00000430898 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00222-205ENST00000430898 EEA1Q15075 1411 aa12.08□□□□□ -0.48
LINC00222-205ENST00000430898 KCNA4P22459 653 aa12.06□□□□□ -0.48
LINC00222-205ENST00000430898 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
LINC00222-205ENST00000430898 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.49
LINC00222-205ENST00000430898 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
LINC00222-205ENST00000430898 BAZ1BQ9UIG0 1483 aaKnown RBP11.98□□□□□ -0.49
LINC00222-205ENST00000430898 SENP3Q9H4L4 574 aaPredicted RBP11.96□□□□□ -0.49
LINC00222-205ENST00000430898 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
LINC00222-205ENST00000430898 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
LINC00222-205ENST00000430898 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
LINC00222-205ENST00000430898 ABCC8Q09428 1581 aa11.91□□□□□ -0.5
LINC00222-205ENST00000430898 NCAPD3P42695 1498 aa11.9□□□□□ -0.5
LINC00222-205ENST00000430898 HMGXB3Q12766 1538 aa11.87□□□□□ -0.51
LINC00222-205ENST00000430898 SOGA1O94964 1423 aa11.85□□□□□ -0.51
LINC00222-205ENST00000430898 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
LINC00222-205ENST00000430898 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
LINC00222-205ENST00000430898 CEP162Q5TB80 1403 aa11.8□□□□□ -0.52
LINC00222-205ENST00000430898 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
LINC00222-205ENST00000430898 KIF21BO75037 1637 aa11.75□□□□□ -0.53
LINC00222-205ENST00000430898 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
LINC00222-205ENST00000430898 TOP2BQ02880 1626 aa11.74□□□□□ -0.53
LINC00222-205ENST00000430898 RUSC2Q8N2Y8 1516 aa11.72□□□□□ -0.53
LINC00222-205ENST00000430898 CFTRP13569 1480 aa11.72□□□□□ -0.53
LINC00222-205ENST00000430898 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
LINC00222-205ENST00000430898 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
LINC00222-205ENST00000430898 PPARGC1BQ86YN6 1023 aaKnown RBP11.67□□□□□ -0.54
LINC00222-205ENST00000430898 CLIP1P30622 1438 aa11.66□□□□□ -0.54
LINC00222-205ENST00000430898 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.55
LINC00222-205ENST00000430898 KIF27Q86VH2 1401 aa11.64□□□□□ -0.55
LINC00222-205ENST00000430898 ADRA2BP18089 450 aa11.64□□□□□ -0.55
LINC00222-205ENST00000430898 APLP2Q06481 763 aa11.63□□□□□ -0.55
LINC00222-205ENST00000430898 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
LINC00222-205ENST00000430898 CADPSQ9ULU8 1353 aa11.63□□□□□ -0.55
LINC00222-205ENST00000430898 PRXQ9BXM0 1461 aa11.62□□□□□ -0.55
LINC00222-205ENST00000430898 VPS8Q8N3P4 1428 aa11.61□□□□□ -0.55
LINC00222-205ENST00000430898 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.56
LINC00222-205ENST00000430898 CCER1Q8TC90 406 aaPredicted RBP11.58□□□□□ -0.56
LINC00222-205ENST00000430898 CUX1P39880 1505 aa11.58□□□□□ -0.56
LINC00222-205ENST00000430898 AMER1Q5JTC6 1135 aaPredicted RBP11.57□□□□□ -0.56
LINC00222-205ENST00000430898 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
LINC00222-205ENST00000430898 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
LINC00222-205ENST00000430898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
LINC00222-205ENST00000430898 IGF1RP08069 1367 aa11.47□□□□□ -0.57
LINC00222-205ENST00000430898 CUX2O14529 1486 aa11.44□□□□□ -0.58
LINC00222-205ENST00000430898 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
LINC00222-205ENST00000430898 CARMIL1Q5VZK9 1371 aa11.43□□□□□ -0.58
LINC00222-205ENST00000430898 CLSPNQ9HAW4 1339 aa11.42□□□□□ -0.58
LINC00222-205ENST00000430898 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
LINC00222-205ENST00000430898 ARAP1Q96P48 1450 aa11.42□□□□□ -0.58
LINC00222-205ENST00000430898 MAP3K1Q13233 1512 aa11.4□□□□□ -0.58
LINC00222-205ENST00000430898 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.58
LINC00222-205ENST00000430898 TTBK1Q5TCY1 1321 aaPredicted RBP11.39□□□□□ -0.59
LINC00222-205ENST00000430898 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
LINC00222-205ENST00000430898 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
LINC00222-205ENST00000430898 FHAD1B1AJZ9 1412 aa11.36□□□□□ -0.59
LINC00222-205ENST00000430898 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
LINC00222-205ENST00000430898 ARHGAP35Q9NRY4 1499 aa11.36□□□□□ -0.59
LINC00222-205ENST00000430898 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
LINC00222-205ENST00000430898 TOPBP1Q92547 1522 aa11.35□□□□□ -0.59
LINC00222-205ENST00000430898 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
LINC00222-205ENST00000430898 RRBP1Q9P2E9 1410 aaKnown RBP11.34□□□□□ -0.59
LINC00222-205ENST00000430898 POLA1P09884 1462 aaPredicted RBP11.31□□□□□ -0.6
LINC00222-205ENST00000430898 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms