RNA–Protein interactions for RNA: ENST00000429614.5

CCDC162P-204, Transcript of coiled-coil domain containing 162, pseudogene, humanhuman

TSL 1 (best)

Gene CCDC162P, Length 715 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162P-204ENST00000429614 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
CCDC162P-204ENST00000429614 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
CCDC162P-204ENST00000429614 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
CCDC162P-204ENST00000429614 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
CCDC162P-204ENST00000429614 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
CCDC162P-204ENST00000429614 FOXD1Q16676 465 aa16.91■□□□□ 0.3
CCDC162P-204ENST00000429614 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
CCDC162P-204ENST00000429614 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
CCDC162P-204ENST00000429614 ADRA2BP18089 450 aa15.89■□□□□ 0.13
CCDC162P-204ENST00000429614 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
CCDC162P-204ENST00000429614 MSH5O43196 834 aa15.82■□□□□ 0.12
CCDC162P-204ENST00000429614 ABCC9O60706 1549 aa15.71■□□□□ 0.11
CCDC162P-204ENST00000429614 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
CCDC162P-204ENST00000429614 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
CCDC162P-204ENST00000429614 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
CCDC162P-204ENST00000429614 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
CCDC162P-204ENST00000429614 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
CCDC162P-204ENST00000429614 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCDC162P-204ENST00000429614 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
CCDC162P-204ENST00000429614 UNC13AQ9UPW8 1703 aa14.58□□□□□ -0.08
CCDC162P-204ENST00000429614 NACADO15069 1562 aa14.56□□□□□ -0.08
CCDC162P-204ENST00000429614 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
CCDC162P-204ENST00000429614 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
CCDC162P-204ENST00000429614 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
CCDC162P-204ENST00000429614 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
CCDC162P-204ENST00000429614 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
CCDC162P-204ENST00000429614 CC2D2AQ9P2K1 1620 aa14.14□□□□□ -0.15
CCDC162P-204ENST00000429614 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
CCDC162P-204ENST00000429614 CECR2Q9BXF3 1484 aa14.11□□□□□ -0.15
CCDC162P-204ENST00000429614 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
CCDC162P-204ENST00000429614 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
CCDC162P-204ENST00000429614 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
CCDC162P-204ENST00000429614 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
CCDC162P-204ENST00000429614 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
CCDC162P-204ENST00000429614 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
CCDC162P-204ENST00000429614 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
CCDC162P-204ENST00000429614 SHROOM4Q9ULL8 1493 aa13.93□□□□□ -0.18
CCDC162P-204ENST00000429614 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
CCDC162P-204ENST00000429614 DNAJC5Q9H3Z4 198 aa13.81□□□□□ -0.2
CCDC162P-204ENST00000429614 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
CCDC162P-204ENST00000429614 KCNA4P22459 653 aa13.56□□□□□ -0.24
CCDC162P-204ENST00000429614 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
CCDC162P-204ENST00000429614 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
CCDC162P-204ENST00000429614 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
CCDC162P-204ENST00000429614 NESP48681 1621 aa13.46□□□□□ -0.25
CCDC162P-204ENST00000429614 CUX2O14529 1486 aa13.46□□□□□ -0.25
CCDC162P-204ENST00000429614 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
CCDC162P-204ENST00000429614 ATAD2BQ9ULI0 1458 aa13.43□□□□□ -0.26
CCDC162P-204ENST00000429614 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
CCDC162P-204ENST00000429614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.276e-6■□□□□ 8.2
CCDC162P-204ENST00000429614 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
CCDC162P-204ENST00000429614 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
CCDC162P-204ENST00000429614 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
CCDC162P-204ENST00000429614 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
CCDC162P-204ENST00000429614 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
CCDC162P-204ENST00000429614 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
CCDC162P-204ENST00000429614 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
CCDC162P-204ENST00000429614 MROH2BQ7Z745 1585 aa13.23□□□□□ -0.29
CCDC162P-204ENST00000429614 BAZ1AQ9NRL2 1556 aaPredicted RBP13.23□□□□□ -0.29
CCDC162P-204ENST00000429614 LAMC3Q9Y6N6 1575 aa13.18□□□□□ -0.3
CCDC162P-204ENST00000429614 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
CCDC162P-204ENST00000429614 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
CCDC162P-204ENST00000429614 WIZO95785 1651 aa13.11□□□□□ -0.31
CCDC162P-204ENST00000429614 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
CCDC162P-204ENST00000429614 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
CCDC162P-204ENST00000429614 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
CCDC162P-204ENST00000429614 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
CCDC162P-204ENST00000429614 WDR62O43379 1518 aa12.98□□□□□ -0.33
CCDC162P-204ENST00000429614 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
CCDC162P-204ENST00000429614 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
CCDC162P-204ENST00000429614 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
CCDC162P-204ENST00000429614 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
CCDC162P-204ENST00000429614 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
CCDC162P-204ENST00000429614 CFTRP13569 1480 aa12.85□□□□□ -0.35
CCDC162P-204ENST00000429614 RSF1Q96T23 1441 aaPredicted RBP12.85□□□□□ -0.35
CCDC162P-204ENST00000429614 CAPN15O75808 1086 aa12.83□□□□□ -0.36
CCDC162P-204ENST00000429614 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
CCDC162P-204ENST00000429614 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
CCDC162P-204ENST00000429614 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
CCDC162P-204ENST00000429614 APLP2Q06481 763 aa12.78□□□□□ -0.36
CCDC162P-204ENST00000429614 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
CCDC162P-204ENST00000429614 CCDC88BA6NC98 1476 aa12.73□□□□□ -0.37
CCDC162P-204ENST00000429614 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
CCDC162P-204ENST00000429614 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
CCDC162P-204ENST00000429614 TOPBP1Q92547 1522 aa12.69□□□□□ -0.38
CCDC162P-204ENST00000429614 CHD1O14646 1710 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 ARHGEF11O15085 1522 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 DSG3P32926 999 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 FBLN2P98095 1184 aa12.68□□□□□ -0.38
CCDC162P-204ENST00000429614 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCDC162P-204ENST00000429614 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
CCDC162P-204ENST00000429614 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
CCDC162P-204ENST00000429614 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms