RNA–Protein interactions for RNA: ENST00000428383.6

SNX31-202, Transcript of sorting nexin 31, humanhuman

TSL 1 (best) BASIC

Gene SNX31, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31-202ENST00000428383 AEBP2Q6ZN18 517 aaPredicted RBP26.93■■□□□ 1.9
SNX31-202ENST00000428383 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.7
SNX31-202ENST00000428383 NISCHQ9Y2I1 1504 aa24.15■■□□□ 1.46
SNX31-202ENST00000428383 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
SNX31-202ENST00000428383 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
SNX31-202ENST00000428383 FOXD1Q16676 465 aa21.37■■□□□ 1.01
SNX31-202ENST00000428383 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
SNX31-202ENST00000428383 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
SNX31-202ENST00000428383 ABCC9O60706 1549 aa20.42■□□□□ 0.86
SNX31-202ENST00000428383 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
SNX31-202ENST00000428383 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
SNX31-202ENST00000428383 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
SNX31-202ENST00000428383 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
SNX31-202ENST00000428383 MSH5O43196 834 aa19.96■□□□□ 0.79
SNX31-202ENST00000428383 PIAS4Q8N2W9 510 aaPredicted RBP19.95■□□□□ 0.78
SNX31-202ENST00000428383 ADRA2BP18089 450 aa19.94■□□□□ 0.78
SNX31-202ENST00000428383 NACADO15069 1562 aa19.7■□□□□ 0.74
SNX31-202ENST00000428383 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
SNX31-202ENST00000428383 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.73
SNX31-202ENST00000428383 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
SNX31-202ENST00000428383 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
SNX31-202ENST00000428383 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
SNX31-202ENST00000428383 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
SNX31-202ENST00000428383 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
SNX31-202ENST00000428383 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
SNX31-202ENST00000428383 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
SNX31-202ENST00000428383 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
SNX31-202ENST00000428383 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
SNX31-202ENST00000428383 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
SNX31-202ENST00000428383 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
SNX31-202ENST00000428383 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
SNX31-202ENST00000428383 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
SNX31-202ENST00000428383 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
SNX31-202ENST00000428383 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
SNX31-202ENST00000428383 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
SNX31-202ENST00000428383 WIZO95785 1651 aa18.34■□□□□ 0.53
SNX31-202ENST00000428383 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
SNX31-202ENST00000428383 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
SNX31-202ENST00000428383 EIF4G1Q04637 1599 aaKnown RBP18.23■□□□□ 0.51
SNX31-202ENST00000428383 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
SNX31-202ENST00000428383 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
SNX31-202ENST00000428383 DNAJC5Q9H3Z4 198 aa18.21■□□□□ 0.51
SNX31-202ENST00000428383 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
SNX31-202ENST00000428383 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
SNX31-202ENST00000428383 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.5
SNX31-202ENST00000428383 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
SNX31-202ENST00000428383 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
SNX31-202ENST00000428383 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
SNX31-202ENST00000428383 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
SNX31-202ENST00000428383 CFTRP13569 1480 aa17.71■□□□□ 0.43
SNX31-202ENST00000428383 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
SNX31-202ENST00000428383 EEA1Q15075 1411 aa17.67■□□□□ 0.42
SNX31-202ENST00000428383 WRNQ14191 1432 aaPredicted RBP eCLIP17.66■□□□□ 0.42
SNX31-202ENST00000428383 CADPSQ9ULU8 1353 aa17.62■□□□□ 0.41
SNX31-202ENST00000428383 CUX2O14529 1486 aa17.62■□□□□ 0.41
SNX31-202ENST00000428383 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
SNX31-202ENST00000428383 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
SNX31-202ENST00000428383 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
SNX31-202ENST00000428383 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
SNX31-202ENST00000428383 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
SNX31-202ENST00000428383 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
SNX31-202ENST00000428383 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
SNX31-202ENST00000428383 NESP48681 1621 aa17.49■□□□□ 0.39
SNX31-202ENST00000428383 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
SNX31-202ENST00000428383 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
SNX31-202ENST00000428383 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
SNX31-202ENST00000428383 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
SNX31-202ENST00000428383 CUX1P39880 1505 aa17.35■□□□□ 0.37
SNX31-202ENST00000428383 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
SNX31-202ENST00000428383 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
SNX31-202ENST00000428383 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
SNX31-202ENST00000428383 DNMBPQ6XZF7 1577 aa17.31■□□□□ 0.36
SNX31-202ENST00000428383 KIF21BO75037 1637 aa17.29■□□□□ 0.36
SNX31-202ENST00000428383 SOGA1O94964 1423 aa17.28■□□□□ 0.36
SNX31-202ENST00000428383 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
SNX31-202ENST00000428383 GOLGA3Q08378 1498 aa17.26■□□□□ 0.35
SNX31-202ENST00000428383 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
SNX31-202ENST00000428383 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
SNX31-202ENST00000428383 LOC105371045A0A1W2PR82 267 aa17.24■□□□□ 0.35
SNX31-202ENST00000428383 TNIKQ9UKE5 1360 aa17.22■□□□□ 0.35
SNX31-202ENST00000428383 THOC2Q8NI27 1593 aaKnown RBP17.22■□□□□ 0.35
SNX31-202ENST00000428383 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.35
SNX31-202ENST00000428383 TOPBP1Q92547 1522 aa17.19■□□□□ 0.34
SNX31-202ENST00000428383 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
SNX31-202ENST00000428383 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
SNX31-202ENST00000428383 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
SNX31-202ENST00000428383 PRXQ9BXM0 1461 aa17.12■□□□□ 0.33
SNX31-202ENST00000428383 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
SNX31-202ENST00000428383 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
SNX31-202ENST00000428383 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
SNX31-202ENST00000428383 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
SNX31-202ENST00000428383 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.32
SNX31-202ENST00000428383 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
SNX31-202ENST00000428383 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
SNX31-202ENST00000428383 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
SNX31-202ENST00000428383 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
SNX31-202ENST00000428383 CUL7Q14999 1698 aa17.03■□□□□ 0.32
SNX31-202ENST00000428383 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.32
SNX31-202ENST00000428383 WDR62O43379 1518 aa17.01■□□□□ 0.31
SNX31-202ENST00000428383 IGF1RP08069 1367 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms