RNA–Protein interactions for RNA: ENST00000427523.1

LINC01501-201, Transcript of long intergenic non-protein coding RNA 1501, humanhuman

TSL 3 BASIC

Gene LINC01501, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01501-201ENST00000427523 AEBP2Q6ZN18 517 aaPredicted RBP16.09■□□□□ 0.17
LINC01501-201ENST00000427523 CHIC1Q5VXU3 224 aa15.89■□□□□ 0.13
LINC01501-201ENST00000427523 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
LINC01501-201ENST00000427523 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
LINC01501-201ENST00000427523 NISCHQ9Y2I1 1504 aa13.5□□□□□ -0.25
LINC01501-201ENST00000427523 PLPPR3Q6T4P5 718 aa13.01□□□□□ -0.33
LINC01501-201ENST00000427523 FOXD1Q16676 465 aa12.67□□□□□ -0.38
LINC01501-201ENST00000427523 ADRA2BP18089 450 aa12.27□□□□□ -0.45
LINC01501-201ENST00000427523 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
LINC01501-201ENST00000427523 PIAS4Q8N2W9 510 aaPredicted RBP12.03□□□□□ -0.48
LINC01501-201ENST00000427523 CCDC180Q9P1Z9 1646 aa11.99□□□□□ -0.49
LINC01501-201ENST00000427523 MSH5O43196 834 aa11.72□□□□□ -0.53
LINC01501-201ENST00000427523 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
LINC01501-201ENST00000427523 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
LINC01501-201ENST00000427523 ZCCHC6Q5VYS8 1495 aaKnown RBP11.3□□□□□ -0.6
LINC01501-201ENST00000427523 KCNA4P22459 653 aa11.28□□□□□ -0.6
LINC01501-201ENST00000427523 ABCC9O60706 1549 aa11.26□□□□□ -0.61
LINC01501-201ENST00000427523 DCAF1Q9Y4B6 1507 aa11.26□□□□□ -0.61
LINC01501-201ENST00000427523 NCBP3Q53F19 620 aaKnown RBP11.25□□□□□ -0.61
LINC01501-201ENST00000427523 MYO15BQ96JP2 1530 aa11.21□□□□□ -0.61
LINC01501-201ENST00000427523 DCAF8L2P0C7V8 631 aa11.2□□□□□ -0.62
LINC01501-201ENST00000427523 NACADO15069 1562 aa11.18□□□□□ -0.62
LINC01501-201ENST00000427523 RB1CC1Q8TDY2 1594 aa11.12□□□□□ -0.63
LINC01501-201ENST00000427523 CNKSR2Q8WXI2 1034 aa11.12□□□□□ -0.63
LINC01501-201ENST00000427523 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
LINC01501-201ENST00000427523 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
LINC01501-201ENST00000427523 DMRT2Q9Y5R5 561 aa10.96□□□□□ -0.65
LINC01501-201ENST00000427523 RNF216Q9NWF9 866 aaPredicted RBP10.87□□□□□ -0.67
LINC01501-201ENST00000427523 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
LINC01501-201ENST00000427523 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
LINC01501-201ENST00000427523 UNC13AQ9UPW8 1703 aa10.78□□□□□ -0.68
LINC01501-201ENST00000427523 SHROOM4Q9ULL8 1493 aa10.78□□□□□ -0.68
LINC01501-201ENST00000427523 HOXD11P31277 338 aaPredicted RBP10.77□□□□□ -0.69
LINC01501-201ENST00000427523 DNAJC5BQ9UF47 199 aa10.68□□□□□ -0.7
LINC01501-201ENST00000427523 POTEDQ86YR6 584 aa10.67□□□□□ -0.7
LINC01501-201ENST00000427523 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
LINC01501-201ENST00000427523 BICRAQ9NZM4 1560 aa10.59□□□□□ -0.71
LINC01501-201ENST00000427523 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC01501-201ENST00000427523 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.72
LINC01501-201ENST00000427523 DCAF8L1A6NGE4 600 aa10.52□□□□□ -0.73
LINC01501-201ENST00000427523 SMARCA4P51532 1647 aa10.43□□□□□ -0.74
LINC01501-201ENST00000427523 CSRNP3Q8WYN3 585 aa10.41□□□□□ -0.74
LINC01501-201ENST00000427523 FOXD4L1Q9NU39 408 aa10.4□□□□□ -0.74
LINC01501-201ENST00000427523 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
LINC01501-201ENST00000427523 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
LINC01501-201ENST00000427523 CECR2Q9BXF3 1484 aa10.37□□□□□ -0.75
LINC01501-201ENST00000427523 EIF4G1Q04637 1599 aaKnown RBP10.37□□□□□ -0.75
LINC01501-201ENST00000427523 RSF1Q96T23 1441 aaPredicted RBP10.35□□□□□ -0.75
LINC01501-201ENST00000427523 ZBTB22O15209 634 aa10.35□□□□□ -0.75
LINC01501-201ENST00000427523 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
LINC01501-201ENST00000427523 PEG3Q9GZU2 1588 aa10.33□□□□□ -0.76
LINC01501-201ENST00000427523 SLC4A2P04920 1241 aa10.32□□□□□ -0.76
LINC01501-201ENST00000427523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.76
LINC01501-201ENST00000427523 WIZO95785 1651 aa10.28□□□□□ -0.76
LINC01501-201ENST00000427523 BAZ1BQ9UIG0 1483 aaKnown RBP10.26□□□□□ -0.77
LINC01501-201ENST00000427523 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
LINC01501-201ENST00000427523 ATAD2BQ9ULI0 1458 aa10.25□□□□□ -0.77
LINC01501-201ENST00000427523 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
LINC01501-201ENST00000427523 CC2D2AQ9P2K1 1620 aa10.25□□□□□ -0.77
LINC01501-201ENST00000427523 NCAPD3P42695 1498 aa10.23□□□□□ -0.77
LINC01501-201ENST00000427523 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
LINC01501-201ENST00000427523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.13□□□□□ -0.79
LINC01501-201ENST00000427523 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
LINC01501-201ENST00000427523 U3KPZ7 1027 aaPredicted RBP10.09□□□□□ -0.79
LINC01501-201ENST00000427523 CCDC88BA6NC98 1476 aa10.07□□□□□ -0.8
LINC01501-201ENST00000427523 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
LINC01501-201ENST00000427523 PRDM2Q13029 1718 aa10.05□□□□□ -0.8
LINC01501-201ENST00000427523 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
LINC01501-201ENST00000427523 APLP2Q06481 763 aa10.02□□□□□ -0.81
LINC01501-201ENST00000427523 RNF39Q9H2S5 420 aa10.01□□□□□ -0.81
LINC01501-201ENST00000427523 LAMC3Q9Y6N6 1575 aa9.99□□□□□ -0.81
LINC01501-201ENST00000427523 CADPSQ9ULU8 1353 aa9.97□□□□□ -0.81
LINC01501-201ENST00000427523 CFTRP13569 1480 aa9.95□□□□□ -0.82
LINC01501-201ENST00000427523 C1QBPQ07021 282 aaKnown RBP9.94□□□□□ -0.82
LINC01501-201ENST00000427523 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
LINC01501-201ENST00000427523 ABCC8Q09428 1581 aa9.89□□□□□ -0.83
LINC01501-201ENST00000427523 TRIM41Q8WV44 630 aa9.88□□□□□ -0.83
LINC01501-201ENST00000427523 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
LINC01501-201ENST00000427523 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
LINC01501-201ENST00000427523 WRNQ14191 1432 aaPredicted RBP eCLIP9.84□□□□□ -0.83
LINC01501-201ENST00000427523 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
LINC01501-201ENST00000427523 ERCC6Q03468 1493 aa9.81□□□□□ -0.84
LINC01501-201ENST00000427523 ZNF219Q9P2Y4 722 aaPredicted RBP9.8□□□□□ -0.84
LINC01501-201ENST00000427523 TOP2BQ02880 1626 aa9.79□□□□□ -0.84
LINC01501-201ENST00000427523 BIVM-ERCC5R4GMW8 1640 aa9.79□□□□□ -0.84
LINC01501-201ENST00000427523 CAPN15O75808 1086 aa9.79□□□□□ -0.84
LINC01501-201ENST00000427523 KIF21AQ7Z4S6 1674 aa9.78□□□□□ -0.84
LINC01501-201ENST00000427523 NESP48681 1621 aa9.78□□□□□ -0.84
LINC01501-201ENST00000427523 DNMBPQ6XZF7 1577 aa9.77□□□□□ -0.85
LINC01501-201ENST00000427523 SPINK5Q9NQ38 1064 aaPredicted RBP9.77□□□□□ -0.85
LINC01501-201ENST00000427523 TRHP20396 242 aaPredicted RBP9.76□□□□□ -0.85
LINC01501-201ENST00000427523 EEA1Q15075 1411 aa9.75□□□□□ -0.85
LINC01501-201ENST00000427523 MRC2Q9UBG0 1479 aa9.74□□□□□ -0.85
LINC01501-201ENST00000427523 SYNJ1O43426 1573 aa9.71□□□□□ -0.85
LINC01501-201ENST00000427523 TOPBP1Q92547 1522 aa9.71□□□□□ -0.86
LINC01501-201ENST00000427523 CUX1P39880 1505 aa9.7□□□□□ -0.86
LINC01501-201ENST00000427523 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
LINC01501-201ENST00000427523 WDR97A6NE52 1622 aa9.67□□□□□ -0.86
LINC01501-201ENST00000427523 WDR62O43379 1518 aa9.67□□□□□ -0.86
LINC01501-201ENST00000427523 FGD5Q6ZNL6 1462 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms