RNA–Protein interactions for RNA: ENST00000423966.5

AFF3-206, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-206ENST00000423966 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
AFF3-206ENST00000423966 CHIC1Q5VXU3 224 aa24.48■■□□□ 1.51
AFF3-206ENST00000423966 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
AFF3-206ENST00000423966 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
AFF3-206ENST00000423966 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
AFF3-206ENST00000423966 FOXD1Q16676 465 aa21.1■□□□□ 0.97
AFF3-206ENST00000423966 POTEDQ86YR6 584 aa20.73■□□□□ 0.91
AFF3-206ENST00000423966 MSH5O43196 834 aa19.93■□□□□ 0.78
AFF3-206ENST00000423966 PIAS4Q8N2W9 510 aaPredicted RBP19.5■□□□□ 0.71
AFF3-206ENST00000423966 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
AFF3-206ENST00000423966 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
AFF3-206ENST00000423966 ADRA2BP18089 450 aa19.09■□□□□ 0.65
AFF3-206ENST00000423966 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
AFF3-206ENST00000423966 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
AFF3-206ENST00000423966 ABCC9O60706 1549 aa18.33■□□□□ 0.53
AFF3-206ENST00000423966 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
AFF3-206ENST00000423966 DCAF8L2P0C7V8 631 aa18.14■□□□□ 0.49
AFF3-206ENST00000423966 MYO15BQ96JP2 1530 aa18.06■□□□□ 0.48
AFF3-206ENST00000423966 NACADO15069 1562 aa18.03■□□□□ 0.48
AFF3-206ENST00000423966 RB1CC1Q8TDY2 1594 aa17.93■□□□□ 0.46
AFF3-206ENST00000423966 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
AFF3-206ENST00000423966 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
AFF3-206ENST00000423966 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
AFF3-206ENST00000423966 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
AFF3-206ENST00000423966 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
AFF3-206ENST00000423966 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
AFF3-206ENST00000423966 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
AFF3-206ENST00000423966 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
AFF3-206ENST00000423966 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
AFF3-206ENST00000423966 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
AFF3-206ENST00000423966 RNF39Q9H2S5 420 aa17■□□□□ 0.31
AFF3-206ENST00000423966 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
AFF3-206ENST00000423966 CECR2Q9BXF3 1484 aa16.95■□□□□ 0.3
AFF3-206ENST00000423966 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
AFF3-206ENST00000423966 SUPT5HO00267 1087 aaKnown RBP16.87■□□□□ 0.29
AFF3-206ENST00000423966 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
AFF3-206ENST00000423966 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
AFF3-206ENST00000423966 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
AFF3-206ENST00000423966 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
AFF3-206ENST00000423966 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
AFF3-206ENST00000423966 WIZO95785 1651 aa16.73■□□□□ 0.27
AFF3-206ENST00000423966 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
AFF3-206ENST00000423966 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
AFF3-206ENST00000423966 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
AFF3-206ENST00000423966 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
AFF3-206ENST00000423966 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
AFF3-206ENST00000423966 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
AFF3-206ENST00000423966 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
AFF3-206ENST00000423966 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
AFF3-206ENST00000423966 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
AFF3-206ENST00000423966 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
AFF3-206ENST00000423966 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
AFF3-206ENST00000423966 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
AFF3-206ENST00000423966 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
AFF3-206ENST00000423966 PRDM2Q13029 1718 aa16.15■□□□□ 0.18
AFF3-206ENST00000423966 DNAJC5Q9H3Z4 198 aa16.14■□□□□ 0.17
AFF3-206ENST00000423966 CFTRP13569 1480 aa16.14■□□□□ 0.17
AFF3-206ENST00000423966 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
AFF3-206ENST00000423966 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
AFF3-206ENST00000423966 POTEHQ6S545 545 aa16.08■□□□□ 0.16
AFF3-206ENST00000423966 NESP48681 1621 aa15.99■□□□□ 0.15
AFF3-206ENST00000423966 PDS5BQ9NTI5 1447 aa15.99■□□□□ 0.15
AFF3-206ENST00000423966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
AFF3-206ENST00000423966 FANCD2Q9BXW9 1451 aa15.96■□□□□ 0.14
AFF3-206ENST00000423966 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
AFF3-206ENST00000423966 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
AFF3-206ENST00000423966 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
AFF3-206ENST00000423966 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
AFF3-206ENST00000423966 KIF21AQ7Z4S6 1674 aa15.88■□□□□ 0.13
AFF3-206ENST00000423966 TOP2BQ02880 1626 aa15.84■□□□□ 0.13
AFF3-206ENST00000423966 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
AFF3-206ENST00000423966 ERCC6Q03468 1493 aa15.83■□□□□ 0.12
AFF3-206ENST00000423966 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
AFF3-206ENST00000423966 DNMBPQ6XZF7 1577 aa15.8■□□□□ 0.12
AFF3-206ENST00000423966 CUX1P39880 1505 aa15.8■□□□□ 0.12
AFF3-206ENST00000423966 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
AFF3-206ENST00000423966 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
AFF3-206ENST00000423966 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
AFF3-206ENST00000423966 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
AFF3-206ENST00000423966 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
AFF3-206ENST00000423966 DSG3P32926 999 aa15.68■□□□□ 0.1
AFF3-206ENST00000423966 WDR62O43379 1518 aa15.68■□□□□ 0.1
AFF3-206ENST00000423966 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
AFF3-206ENST00000423966 EEA1Q15075 1411 aa15.66■□□□□ 0.1
AFF3-206ENST00000423966 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
AFF3-206ENST00000423966 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
AFF3-206ENST00000423966 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
AFF3-206ENST00000423966 SOGA1O94964 1423 aa15.61■□□□□ 0.09
AFF3-206ENST00000423966 KIF27Q86VH2 1401 aa15.58■□□□□ 0.08
AFF3-206ENST00000423966 NPM3O75607 178 aaKnown RBP15.57■□□□□ 0.08
AFF3-206ENST00000423966 CAPN15O75808 1086 aa15.57■□□□□ 0.08
AFF3-206ENST00000423966 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
AFF3-206ENST00000423966 FAM9AQ8IZU1 332 aaPredicted RBP15.56■□□□□ 0.08
AFF3-206ENST00000423966 CUX2O14529 1486 aa15.55■□□□□ 0.08
AFF3-206ENST00000423966 IFT140Q96RY7 1462 aa15.55■□□□□ 0.08
AFF3-206ENST00000423966 RAD54L2Q9Y4B4 1467 aa15.55■□□□□ 0.08
AFF3-206ENST00000423966 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
AFF3-206ENST00000423966 TARBP1Q13395 1621 aaKnown RBP15.53■□□□□ 0.08
AFF3-206ENST00000423966 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
AFF3-206ENST00000423966 RUSC2Q8N2Y8 1516 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms