RNA–Protein interactions for RNA: ENST00000423207.6

PDE4B-206, Transcript of phosphodiesterase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4B, Length 4,546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-206ENST00000423207 NISCHQ9Y2I1 1504 aa15.05■□□□□ 0
PDE4B-206ENST00000423207 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
PDE4B-206ENST00000423207 ABCC9O60706 1549 aa13.23□□□□□ -0.29
PDE4B-206ENST00000423207 SHROOM4Q9ULL8 1493 aa13.06□□□□□ -0.32
PDE4B-206ENST00000423207 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
PDE4B-206ENST00000423207 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
PDE4B-206ENST00000423207 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDE4B-206ENST00000423207 RB1CC1Q8TDY2 1594 aa12.62□□□□□ -0.39
PDE4B-206ENST00000423207 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
PDE4B-206ENST00000423207 NACADO15069 1562 aa12.52□□□□□ -0.41
PDE4B-206ENST00000423207 ZCCHC6Q5VYS8 1495 aaKnown RBP12.44□□□□□ -0.42
PDE4B-206ENST00000423207 SCRIBQ14160 1630 aa12.36□□□□□ -0.43
PDE4B-206ENST00000423207 DCAF1Q9Y4B6 1507 aa12.22□□□□□ -0.45
PDE4B-206ENST00000423207 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
PDE4B-206ENST00000423207 MYO15BQ96JP2 1530 aa12.16□□□□□ -0.46
PDE4B-206ENST00000423207 APLP2Q06481 763 aa12.13□□□□□ -0.47
PDE4B-206ENST00000423207 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
PDE4B-206ENST00000423207 UBTFP17480 764 aaKnown RBP11.95□□□□□ -0.5
PDE4B-206ENST00000423207 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
PDE4B-206ENST00000423207 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
PDE4B-206ENST00000423207 FBLN2P98095 1184 aa11.9□□□□□ -0.51
PDE4B-206ENST00000423207 ERCC6Q03468 1493 aa11.89□□□□□ -0.51
PDE4B-206ENST00000423207 RANGAP1P46060 587 aaPredicted RBP11.89□□□□□ -0.51
PDE4B-206ENST00000423207 BAZ1AQ9NRL2 1556 aaPredicted RBP11.87□□□□□ -0.51
PDE4B-206ENST00000423207 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
PDE4B-206ENST00000423207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
PDE4B-206ENST00000423207 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
PDE4B-206ENST00000423207 SMARCA2P51531 1590 aa11.8□□□□□ -0.52
PDE4B-206ENST00000423207 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
PDE4B-206ENST00000423207 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
PDE4B-206ENST00000423207 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
PDE4B-206ENST00000423207 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
PDE4B-206ENST00000423207 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
PDE4B-206ENST00000423207 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
PDE4B-206ENST00000423207 ATAD2BQ9ULI0 1458 aa11.59□□□□□ -0.55
PDE4B-206ENST00000423207 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.56
PDE4B-206ENST00000423207 CHIC1Q5VXU3 224 aa11.55□□□□□ -0.56
PDE4B-206ENST00000423207 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
PDE4B-206ENST00000423207 MROH2BQ7Z745 1585 aa11.53□□□□□ -0.56
PDE4B-206ENST00000423207 NCAPD3P42695 1498 aa11.52□□□□□ -0.57
PDE4B-206ENST00000423207 SMARCA4P51532 1647 aa11.51□□□□□ -0.57
PDE4B-206ENST00000423207 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
PDE4B-206ENST00000423207 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
PDE4B-206ENST00000423207 CC2D2AQ9P2K1 1620 aa11.46□□□□□ -0.58
PDE4B-206ENST00000423207 CEP164Q9UPV0 1460 aa11.46□□□□□ -0.58
PDE4B-206ENST00000423207 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
PDE4B-206ENST00000423207 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
PDE4B-206ENST00000423207 ABCC8Q09428 1581 aa11.42□□□□□ -0.58
PDE4B-206ENST00000423207 KIF27Q86VH2 1401 aa11.4□□□□□ -0.58
PDE4B-206ENST00000423207 DNAJC5BQ9UF47 199 aa11.39□□□□□ -0.59
PDE4B-206ENST00000423207 BICRAQ9NZM4 1560 aa11.38□□□□□ -0.59
PDE4B-206ENST00000423207 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
PDE4B-206ENST00000423207 FANCD2Q9BXW9 1451 aa11.36□□□□□ -0.59
PDE4B-206ENST00000423207 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
PDE4B-206ENST00000423207 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
PDE4B-206ENST00000423207 SOGA1O94964 1423 aa11.34□□□□□ -0.59
PDE4B-206ENST00000423207 EEA1Q15075 1411 aa11.34□□□□□ -0.59
PDE4B-206ENST00000423207 ESF1Q9H501 851 aaKnown RBP11.33□□□□□ -0.6
PDE4B-206ENST00000423207 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
PDE4B-206ENST00000423207 WIZO95785 1651 aa11.32□□□□□ -0.6
PDE4B-206ENST00000423207 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
PDE4B-206ENST00000423207 CUX2O14529 1486 aa11.28□□□□□ -0.6
PDE4B-206ENST00000423207 ARID3CA6NKF2 412 aa11.27□□□□□ -0.61
PDE4B-206ENST00000423207 TDRD9Q8NDG6 1382 aaKnown RBP11.25□□□□□ -0.61
PDE4B-206ENST00000423207 ITGAEP38570 1179 aa11.23□□□□□ -0.61
PDE4B-206ENST00000423207 CARMIL2Q6F5E8 1435 aa11.23□□□□□ -0.61
PDE4B-206ENST00000423207 MRC2Q9UBG0 1479 aa11.23□□□□□ -0.61
PDE4B-206ENST00000423207 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
PDE4B-206ENST00000423207 PLEKHD1A6NEE1 506 aa11.22□□□□□ -0.61
PDE4B-206ENST00000423207 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.62
PDE4B-206ENST00000423207 FAM50AQ14320 339 aaKnown RBP11.21□□□□□ -0.62
PDE4B-206ENST00000423207 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
PDE4B-206ENST00000423207 LAMC3Q9Y6N6 1575 aa11.18□□□□□ -0.62
PDE4B-206ENST00000423207 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
PDE4B-206ENST00000423207 CFTRP13569 1480 aa11.17□□□□□ -0.62
PDE4B-206ENST00000423207 KCNH8Q96L42 1107 aa11.15□□□□□ -0.62
PDE4B-206ENST00000423207 NESP48681 1621 aa11.13□□□□□ -0.63
PDE4B-206ENST00000423207 IFT140Q96RY7 1462 aa11.13□□□□□ -0.63
PDE4B-206ENST00000423207 GOLGA3Q08378 1498 aa11.12□□□□□ -0.63
PDE4B-206ENST00000423207 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
PDE4B-206ENST00000423207 MTUS2Q5JR59 1369 aa11.1□□□□□ -0.63
PDE4B-206ENST00000423207 PCGF6Q9BYE7 350 aa11.1□□□□□ -0.63
PDE4B-206ENST00000423207 TSPY4P0CV99 314 aa11.1□□□□□ -0.63
PDE4B-206ENST00000423207 TSPY10P0CW01 314 aa11.1□□□□□ -0.63
PDE4B-206ENST00000423207 CYB5RLQ6IPT4 315 aa11.09□□□□□ -0.63
PDE4B-206ENST00000423207 TRIM52Q96A61 297 aa11.09□□□□□ -0.63
PDE4B-206ENST00000423207 JPH4Q96JJ6 628 aa11.08□□□□□ -0.64
PDE4B-206ENST00000423207 GAPVD1Q14C86 1478 aa11.07□□□□□ -0.64
PDE4B-206ENST00000423207 CCER1Q8TC90 406 aaPredicted RBP11.07□□□□□ -0.64
PDE4B-206ENST00000423207 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
PDE4B-206ENST00000423207 ARID4BQ4LE39 1312 aaPredicted RBP11.06□□□□□ -0.64
PDE4B-206ENST00000423207 CLIP1P30622 1438 aa11.05□□□□□ -0.64
PDE4B-206ENST00000423207 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
PDE4B-206ENST00000423207 BCANQ96GW7 911 aa11.05□□□□□ -0.64
PDE4B-206ENST00000423207 PEG3Q9GZU2 1588 aa11.04□□□□□ -0.64
PDE4B-206ENST00000423207 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
PDE4B-206ENST00000423207 FHAD1B1AJZ9 1412 aa11.01□□□□□ -0.65
PDE4B-206ENST00000423207 PLPPR3Q6T4P5 718 aa11.01□□□□□ -0.65
PDE4B-206ENST00000423207 RAPGEF2Q9Y4G8 1499 aa11□□□□□ -0.65
PDE4B-206ENST00000423207 TOPBP1Q92547 1522 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms