RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 AEBP2Q6ZN18 517 aaPredicted RBP24.68■■□□□ 1.54
HLA-DQA1-204ENST00000422863 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
HLA-DQA1-204ENST00000422863 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
HLA-DQA1-204ENST00000422863 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
HLA-DQA1-204ENST00000422863 FOXD1Q16676 465 aa19.83■□□□□ 0.77
HLA-DQA1-204ENST00000422863 POTEDQ86YR6 584 aa19.79■□□□□ 0.76
HLA-DQA1-204ENST00000422863 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
HLA-DQA1-204ENST00000422863 MSH5O43196 834 aa18.86■□□□□ 0.61
HLA-DQA1-204ENST00000422863 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
HLA-DQA1-204ENST00000422863 ABCC9O60706 1549 aa17.95■□□□□ 0.46
HLA-DQA1-204ENST00000422863 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
HLA-DQA1-204ENST00000422863 ADRA2BP18089 450 aa17.8■□□□□ 0.44
HLA-DQA1-204ENST00000422863 PLPPR3Q6T4P5 718 aa17.7■□□□□ 0.42
HLA-DQA1-204ENST00000422863 CCDC180Q9P1Z9 1646 aa17.45■□□□□ 0.38
HLA-DQA1-204ENST00000422863 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
HLA-DQA1-204ENST00000422863 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
HLA-DQA1-204ENST00000422863 PABPN1Q86U42 306 aaKnown RBP eCLIP16.68■□□□□ 0.26
HLA-DQA1-204ENST00000422863 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQA1-204ENST00000422863 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
HLA-DQA1-204ENST00000422863 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
HLA-DQA1-204ENST00000422863 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
HLA-DQA1-204ENST00000422863 MAPK8IP2Q13387 824 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQA1-204ENST00000422863 NACADO15069 1562 aa16.57■□□□□ 0.24
HLA-DQA1-204ENST00000422863 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
HLA-DQA1-204ENST00000422863 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
HLA-DQA1-204ENST00000422863 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
HLA-DQA1-204ENST00000422863 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
HLA-DQA1-204ENST00000422863 MYO15BQ96JP2 1530 aa16.1■□□□□ 0.17
HLA-DQA1-204ENST00000422863 DNAJC5Q9H3Z4 198 aa16.05■□□□□ 0.16
HLA-DQA1-204ENST00000422863 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
HLA-DQA1-204ENST00000422863 EIF4G1Q04637 1599 aaKnown RBP16■□□□□ 0.15
HLA-DQA1-204ENST00000422863 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
HLA-DQA1-204ENST00000422863 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
HLA-DQA1-204ENST00000422863 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
HLA-DQA1-204ENST00000422863 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
HLA-DQA1-204ENST00000422863 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
HLA-DQA1-204ENST00000422863 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
HLA-DQA1-204ENST00000422863 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
HLA-DQA1-204ENST00000422863 CUX2O14529 1486 aa15.51■□□□□ 0.07
HLA-DQA1-204ENST00000422863 ERCC6Q03468 1493 aa15.48■□□□□ 0.07
HLA-DQA1-204ENST00000422863 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
HLA-DQA1-204ENST00000422863 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQA1-204ENST00000422863 POTEHQ6S545 545 aa15.34■□□□□ 0.05
HLA-DQA1-204ENST00000422863 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
HLA-DQA1-204ENST00000422863 NESP48681 1621 aa15.32■□□□□ 0.04
HLA-DQA1-204ENST00000422863 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
HLA-DQA1-204ENST00000422863 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
HLA-DQA1-204ENST00000422863 ATAD2BQ9ULI0 1458 aa15.22■□□□□ 0.03
HLA-DQA1-204ENST00000422863 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
HLA-DQA1-204ENST00000422863 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
HLA-DQA1-204ENST00000422863 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
HLA-DQA1-204ENST00000422863 SMARCA2P51531 1590 aa15.13■□□□□ 0.01
HLA-DQA1-204ENST00000422863 HMGXB3Q12766 1538 aa15.12■□□□□ 0.01
HLA-DQA1-204ENST00000422863 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
HLA-DQA1-204ENST00000422863 LAMC3Q9Y6N6 1575 aa15.04■□□□□ -0
HLA-DQA1-204ENST00000422863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
HLA-DQA1-204ENST00000422863 PDS5BQ9NTI5 1447 aa14.95□□□□□ -0.02
HLA-DQA1-204ENST00000422863 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQA1-204ENST00000422863 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
HLA-DQA1-204ENST00000422863 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
HLA-DQA1-204ENST00000422863 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
HLA-DQA1-204ENST00000422863 WDR62O43379 1518 aa14.83□□□□□ -0.04
HLA-DQA1-204ENST00000422863 CADPSQ9ULU8 1353 aa14.83□□□□□ -0.04
HLA-DQA1-204ENST00000422863 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
HLA-DQA1-204ENST00000422863 WIZO95785 1651 aa14.76□□□□□ -0.05
HLA-DQA1-204ENST00000422863 DSG3P32926 999 aa14.73□□□□□ -0.05
HLA-DQA1-204ENST00000422863 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
HLA-DQA1-204ENST00000422863 RIMBP3CA6NJZ7 1639 aa14.72□□□□□ -0.05
HLA-DQA1-204ENST00000422863 RIMBP3BA6NNM3 1639 aa14.72□□□□□ -0.05
HLA-DQA1-204ENST00000422863 RIMBP3Q9UFD9 1639 aa14.72□□□□□ -0.05
HLA-DQA1-204ENST00000422863 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
HLA-DQA1-204ENST00000422863 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
HLA-DQA1-204ENST00000422863 SPINK5Q9NQ38 1064 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQA1-204ENST00000422863 CAPN15O75808 1086 aa14.59□□□□□ -0.07
HLA-DQA1-204ENST00000422863 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
HLA-DQA1-204ENST00000422863 CYB5RLQ6IPT4 315 aa14.57□□□□□ -0.08
HLA-DQA1-204ENST00000422863 ARHGEF11O15085 1522 aa14.56□□□□□ -0.08
HLA-DQA1-204ENST00000422863 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
HLA-DQA1-204ENST00000422863 CFTRP13569 1480 aa14.56□□□□□ -0.08
HLA-DQA1-204ENST00000422863 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQA1-204ENST00000422863 ZNF608Q9ULD9 1512 aaPredicted RBP14.53□□□□□ -0.08
HLA-DQA1-204ENST00000422863 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
HLA-DQA1-204ENST00000422863 CHD1O14646 1710 aa14.48□□□□□ -0.09
HLA-DQA1-204ENST00000422863 IFT140Q96RY7 1462 aa14.43□□□□□ -0.1
HLA-DQA1-204ENST00000422863 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
HLA-DQA1-204ENST00000422863 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
HLA-DQA1-204ENST00000422863 ARAP1Q96P48 1450 aa14.4□□□□□ -0.1
HLA-DQA1-204ENST00000422863 FBLN2P98095 1184 aa14.39□□□□□ -0.11
HLA-DQA1-204ENST00000422863 RSF1Q96T23 1441 aaPredicted RBP14.38□□□□□ -0.11
HLA-DQA1-204ENST00000422863 TOPBP1Q92547 1522 aa14.37□□□□□ -0.11
HLA-DQA1-204ENST00000422863 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
HLA-DQA1-204ENST00000422863 AQRO60306 1485 aaKnown RBP eCLIP14.36□□□□□ -0.11
HLA-DQA1-204ENST00000422863 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
HLA-DQA1-204ENST00000422863 TARBP1Q13395 1621 aaKnown RBP14.3□□□□□ -0.12
HLA-DQA1-204ENST00000422863 DNMBPQ6XZF7 1577 aa14.27□□□□□ -0.12
HLA-DQA1-204ENST00000422863 ABCC8Q09428 1581 aa14.25□□□□□ -0.13
HLA-DQA1-204ENST00000422863 RAD54L2Q9Y4B4 1467 aa14.22□□□□□ -0.13
HLA-DQA1-204ENST00000422863 TDRD9Q8NDG6 1382 aaKnown RBP14.2□□□□□ -0.14
HLA-DQA1-204ENST00000422863 POLA1P09884 1462 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQA1-204ENST00000422863 ABCB7O75027 752 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms