RNA–Protein interactions for RNA: ENST00000422426.5

APOL3-206, Transcript of apolipoprotein L3, humanhuman

TSL 1 (best)

Gene APOL3, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL3-206ENST00000422426 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
APOL3-206ENST00000422426 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
APOL3-206ENST00000422426 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
APOL3-206ENST00000422426 ZCCHC6Q5VYS8 1495 aaKnown RBP19.85■□□□□ 0.77
APOL3-206ENST00000422426 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
APOL3-206ENST00000422426 ABCC9O60706 1549 aa19.77■□□□□ 0.75
APOL3-206ENST00000422426 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
APOL3-206ENST00000422426 DCAF1Q9Y4B6 1507 aa19.38■□□□□ 0.69
APOL3-206ENST00000422426 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
APOL3-206ENST00000422426 HRCP23327 699 aa19.23■□□□□ 0.67
APOL3-206ENST00000422426 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
APOL3-206ENST00000422426 NACADO15069 1562 aa19.12■□□□□ 0.65
APOL3-206ENST00000422426 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
APOL3-206ENST00000422426 PCGF6Q9BYE7 350 aa19■□□□□ 0.63
APOL3-206ENST00000422426 RB1CC1Q8TDY2 1594 aa18.99■□□□□ 0.63
APOL3-206ENST00000422426 PPARGC1BQ86YN6 1023 aaKnown RBP18.88■□□□□ 0.61
APOL3-206ENST00000422426 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
APOL3-206ENST00000422426 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
APOL3-206ENST00000422426 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
APOL3-206ENST00000422426 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
APOL3-206ENST00000422426 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
APOL3-206ENST00000422426 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
APOL3-206ENST00000422426 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
APOL3-206ENST00000422426 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
APOL3-206ENST00000422426 WIZO95785 1651 aa18.25■□□□□ 0.51
APOL3-206ENST00000422426 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
APOL3-206ENST00000422426 SMARCA4P51532 1647 aa18.18■□□□□ 0.5
APOL3-206ENST00000422426 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
APOL3-206ENST00000422426 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
APOL3-206ENST00000422426 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
APOL3-206ENST00000422426 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
APOL3-206ENST00000422426 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
APOL3-206ENST00000422426 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
APOL3-206ENST00000422426 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
APOL3-206ENST00000422426 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
APOL3-206ENST00000422426 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.46
APOL3-206ENST00000422426 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
APOL3-206ENST00000422426 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
APOL3-206ENST00000422426 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
APOL3-206ENST00000422426 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
APOL3-206ENST00000422426 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
APOL3-206ENST00000422426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
APOL3-206ENST00000422426 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
APOL3-206ENST00000422426 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
APOL3-206ENST00000422426 CCER1Q8TC90 406 aaPredicted RBP17.65■□□□□ 0.42
APOL3-206ENST00000422426 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
APOL3-206ENST00000422426 NEUROD1Q13562 356 aa17.65■□□□□ 0.42
APOL3-206ENST00000422426 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
APOL3-206ENST00000422426 ABCC8Q09428 1581 aa17.58■□□□□ 0.4
APOL3-206ENST00000422426 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
APOL3-206ENST00000422426 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
APOL3-206ENST00000422426 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
APOL3-206ENST00000422426 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
APOL3-206ENST00000422426 CEP162Q5TB80 1403 aa17.43■□□□□ 0.38
APOL3-206ENST00000422426 CENPBP07199 599 aaPredicted RBP17.4■□□□□ 0.38
APOL3-206ENST00000422426 SOGA1O94964 1423 aa17.38■□□□□ 0.37
APOL3-206ENST00000422426 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
APOL3-206ENST00000422426 CFTRP13569 1480 aa17.38■□□□□ 0.37
APOL3-206ENST00000422426 NESP48681 1621 aa17.37■□□□□ 0.37
APOL3-206ENST00000422426 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
APOL3-206ENST00000422426 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
APOL3-206ENST00000422426 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
APOL3-206ENST00000422426 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
APOL3-206ENST00000422426 MYT1Q01538 1121 aa17.27■□□□□ 0.36
APOL3-206ENST00000422426 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
APOL3-206ENST00000422426 UBTFP17480 764 aaKnown RBP17.23■□□□□ 0.35
APOL3-206ENST00000422426 EEA1Q15075 1411 aa17.2■□□□□ 0.34
APOL3-206ENST00000422426 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
APOL3-206ENST00000422426 CUX1P39880 1505 aa17.18■□□□□ 0.34
APOL3-206ENST00000422426 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
APOL3-206ENST00000422426 GOLGA3Q08378 1498 aa17.16■□□□□ 0.34
APOL3-206ENST00000422426 MIER1Q8N108 512 aa17.15■□□□□ 0.34
APOL3-206ENST00000422426 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
APOL3-206ENST00000422426 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
APOL3-206ENST00000422426 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
APOL3-206ENST00000422426 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
APOL3-206ENST00000422426 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
APOL3-206ENST00000422426 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
APOL3-206ENST00000422426 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
APOL3-206ENST00000422426 CLIP1P30622 1438 aa17.01■□□□□ 0.31
APOL3-206ENST00000422426 KIF21BO75037 1637 aa17■□□□□ 0.31
APOL3-206ENST00000422426 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
APOL3-206ENST00000422426 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
APOL3-206ENST00000422426 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
APOL3-206ENST00000422426 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
APOL3-206ENST00000422426 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
APOL3-206ENST00000422426 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
APOL3-206ENST00000422426 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.3
APOL3-206ENST00000422426 CUX2O14529 1486 aa16.92■□□□□ 0.3
APOL3-206ENST00000422426 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
APOL3-206ENST00000422426 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
APOL3-206ENST00000422426 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
APOL3-206ENST00000422426 KIF27Q86VH2 1401 aa16.88■□□□□ 0.29
APOL3-206ENST00000422426 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
APOL3-206ENST00000422426 APLP2Q06481 763 aa16.86■□□□□ 0.29
APOL3-206ENST00000422426 IGF1RP08069 1367 aa16.86■□□□□ 0.29
APOL3-206ENST00000422426 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
APOL3-206ENST00000422426 DHX57Q6P158 1386 aaKnown RBP16.83■□□□□ 0.28
APOL3-206ENST00000422426 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
APOL3-206ENST00000422426 PRXQ9BXM0 1461 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms