RNA–Protein interactions for RNA: ENST00000419992.5

SCN7A-202, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 5

Gene SCN7A, Length 2,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-202ENST00000419992 NISCHQ9Y2I1 1504 aa19.88■□□□□ 0.77
SCN7A-202ENST00000419992 SHROOM4Q9ULL8 1493 aa17.16■□□□□ 0.34
SCN7A-202ENST00000419992 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
SCN7A-202ENST00000419992 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
SCN7A-202ENST00000419992 SUPT5HO00267 1087 aaKnown RBP16.8■□□□□ 0.28
SCN7A-202ENST00000419992 ZCCHC6Q5VYS8 1495 aaKnown RBP16.78■□□□□ 0.28
SCN7A-202ENST00000419992 DCAF1Q9Y4B6 1507 aa16.18■□□□□ 0.18
SCN7A-202ENST00000419992 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
SCN7A-202ENST00000419992 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.17
SCN7A-202ENST00000419992 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
SCN7A-202ENST00000419992 ABCC9O60706 1549 aa15.9■□□□□ 0.14
SCN7A-202ENST00000419992 LOC105371045A0A1W2PR82 267 aa15.78■□□□□ 0.12
SCN7A-202ENST00000419992 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
SCN7A-202ENST00000419992 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
SCN7A-202ENST00000419992 NACADO15069 1562 aa15.62■□□□□ 0.09
SCN7A-202ENST00000419992 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
SCN7A-202ENST00000419992 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
SCN7A-202ENST00000419992 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
SCN7A-202ENST00000419992 TRIM41Q8WV44 630 aa15.57■□□□□ 0.08
SCN7A-202ENST00000419992 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
SCN7A-202ENST00000419992 HRCP23327 699 aa15.54■□□□□ 0.08
SCN7A-202ENST00000419992 MROH2BQ7Z745 1585 aa15.5■□□□□ 0.07
SCN7A-202ENST00000419992 WIZO95785 1651 aa15.43■□□□□ 0.06
SCN7A-202ENST00000419992 PPARGC1BQ86YN6 1023 aaKnown RBP15.37■□□□□ 0.05
SCN7A-202ENST00000419992 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
SCN7A-202ENST00000419992 BAZ1AQ9NRL2 1556 aaPredicted RBP15.27■□□□□ 0.03
SCN7A-202ENST00000419992 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCN7A-202ENST00000419992 UNC13AQ9UPW8 1703 aa15.21■□□□□ 0.02
SCN7A-202ENST00000419992 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
SCN7A-202ENST00000419992 TOP2AP11388 1531 aaKnown RBP15.11■□□□□ 0.01
SCN7A-202ENST00000419992 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
SCN7A-202ENST00000419992 CCDC88BA6NC98 1476 aa15.1■□□□□ 0.01
SCN7A-202ENST00000419992 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
SCN7A-202ENST00000419992 SMARCA2P51531 1590 aa15.05■□□□□ -0
SCN7A-202ENST00000419992 TTBK1Q5TCY1 1321 aaPredicted RBP15.02□□□□□ -0.01
SCN7A-202ENST00000419992 BICRAQ9NZM4 1560 aa15□□□□□ -0.01
SCN7A-202ENST00000419992 SOGA1O94964 1423 aa14.94□□□□□ -0.02
SCN7A-202ENST00000419992 UBTFP17480 764 aaKnown RBP14.9□□□□□ -0.02
SCN7A-202ENST00000419992 ZEB1P37275 1124 aaPredicted RBP14.89□□□□□ -0.03
SCN7A-202ENST00000419992 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
SCN7A-202ENST00000419992 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
SCN7A-202ENST00000419992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
SCN7A-202ENST00000419992 CEP162Q5TB80 1403 aa14.83□□□□□ -0.04
SCN7A-202ENST00000419992 WRNQ14191 1432 aaPredicted RBP eCLIP14.82□□□□□ -0.04
SCN7A-202ENST00000419992 ATAD2BQ9ULI0 1458 aa14.8□□□□□ -0.04
SCN7A-202ENST00000419992 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
SCN7A-202ENST00000419992 PEG3Q9GZU2 1588 aa14.77□□□□□ -0.05
SCN7A-202ENST00000419992 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.05
SCN7A-202ENST00000419992 RANGAP1P46060 587 aaPredicted RBP14.75□□□□□ -0.05
SCN7A-202ENST00000419992 TNIKQ9UKE5 1360 aa14.75□□□□□ -0.05
SCN7A-202ENST00000419992 EEA1Q15075 1411 aa14.73□□□□□ -0.05
SCN7A-202ENST00000419992 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
SCN7A-202ENST00000419992 GOLGA3Q08378 1498 aa14.71□□□□□ -0.06
SCN7A-202ENST00000419992 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
SCN7A-202ENST00000419992 CLIP1P30622 1438 aa14.58□□□□□ -0.08
SCN7A-202ENST00000419992 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
SCN7A-202ENST00000419992 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
SCN7A-202ENST00000419992 KIF21BO75037 1637 aa14.54□□□□□ -0.08
SCN7A-202ENST00000419992 APLP2Q06481 763 aa14.53□□□□□ -0.08
SCN7A-202ENST00000419992 TOP2BQ02880 1626 aa14.5□□□□□ -0.09
SCN7A-202ENST00000419992 NCAPD3P42695 1498 aa14.47□□□□□ -0.09
SCN7A-202ENST00000419992 VPS8Q8N3P4 1428 aa14.46□□□□□ -0.09
SCN7A-202ENST00000419992 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
SCN7A-202ENST00000419992 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
SCN7A-202ENST00000419992 CUX1P39880 1505 aa14.42□□□□□ -0.1
SCN7A-202ENST00000419992 DIEXFQ68CQ4 756 aaKnown RBP14.39□□□□□ -0.11
SCN7A-202ENST00000419992 CFTRP13569 1480 aa14.36□□□□□ -0.11
SCN7A-202ENST00000419992 KIF27Q86VH2 1401 aa14.36□□□□□ -0.11
SCN7A-202ENST00000419992 PRXQ9BXM0 1461 aa14.35□□□□□ -0.11
SCN7A-202ENST00000419992 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
SCN7A-202ENST00000419992 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
SCN7A-202ENST00000419992 KANK4Q5T7N3 995 aaPredicted RBP14.31□□□□□ -0.12
SCN7A-202ENST00000419992 ARAP1Q96P48 1450 aa14.3□□□□□ -0.12
SCN7A-202ENST00000419992 CUX2O14529 1486 aa14.28□□□□□ -0.12
SCN7A-202ENST00000419992 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.12
SCN7A-202ENST00000419992 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
SCN7A-202ENST00000419992 ITGAEP38570 1179 aa14.25□□□□□ -0.13
SCN7A-202ENST00000419992 CC2D2AQ9P2K1 1620 aa14.22□□□□□ -0.13
SCN7A-202ENST00000419992 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
SCN7A-202ENST00000419992 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.14
SCN7A-202ENST00000419992 ARHGAP35Q9NRY4 1499 aa14.2□□□□□ -0.14
SCN7A-202ENST00000419992 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
SCN7A-202ENST00000419992 IGF1RP08069 1367 aa14.2□□□□□ -0.14
SCN7A-202ENST00000419992 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
SCN7A-202ENST00000419992 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
SCN7A-202ENST00000419992 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
SCN7A-202ENST00000419992 YTHDC1Q96MU7 727 aaKnown RBP14.19□□□□□ -0.14
SCN7A-202ENST00000419992 CARMIL1Q5VZK9 1371 aa14.17□□□□□ -0.14
SCN7A-202ENST00000419992 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
SCN7A-202ENST00000419992 CENPBP07199 599 aaPredicted RBP14.14□□□□□ -0.15
SCN7A-202ENST00000419992 NESP48681 1621 aa14.13□□□□□ -0.15
SCN7A-202ENST00000419992 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
SCN7A-202ENST00000419992 DHX57Q6P158 1386 aaKnown RBP14.1□□□□□ -0.15
SCN7A-202ENST00000419992 MIER1Q8N108 512 aa14.1□□□□□ -0.15
SCN7A-202ENST00000419992 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
SCN7A-202ENST00000419992 GTF3C3Q9Y5Q9 886 aa14.08□□□□□ -0.16
SCN7A-202ENST00000419992 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
SCN7A-202ENST00000419992 FAM50AQ14320 339 aaKnown RBP14.05□□□□□ -0.16
SCN7A-202ENST00000419992 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
SCN7A-202ENST00000419992 TOPBP1Q92547 1522 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms