RNA–Protein interactions for RNA: ENST00000418394.1

PCNT-202, Transcript of pericentrin, humanhuman

APPRIS ALT2 TSL 3

Gene PCNT, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNT-202ENST00000418394 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
PCNT-202ENST00000418394 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
PCNT-202ENST00000418394 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
PCNT-202ENST00000418394 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
PCNT-202ENST00000418394 NISCHQ9Y2I1 1504 aa17.77■□□□□ 0.44
PCNT-202ENST00000418394 FOXD1Q16676 465 aa17.75■□□□□ 0.43
PCNT-202ENST00000418394 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
PCNT-202ENST00000418394 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
PCNT-202ENST00000418394 ADRA2BP18089 450 aa16.86■□□□□ 0.29
PCNT-202ENST00000418394 PIAS4Q8N2W9 510 aaPredicted RBP16.69■□□□□ 0.26
PCNT-202ENST00000418394 MSH5O43196 834 aa16.49■□□□□ 0.23
PCNT-202ENST00000418394 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
PCNT-202ENST00000418394 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
PCNT-202ENST00000418394 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
PCNT-202ENST00000418394 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
PCNT-202ENST00000418394 MAPK8IP2Q13387 824 aaPredicted RBP15.36■□□□□ 0.05
PCNT-202ENST00000418394 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
PCNT-202ENST00000418394 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
PCNT-202ENST00000418394 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
PCNT-202ENST00000418394 ABCC9O60706 1549 aa14.92□□□□□ -0.02
PCNT-202ENST00000418394 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
PCNT-202ENST00000418394 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
PCNT-202ENST00000418394 HOXD11P31277 338 aaPredicted RBP14.81□□□□□ -0.04
PCNT-202ENST00000418394 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
PCNT-202ENST00000418394 KCNA4P22459 653 aa14.77□□□□□ -0.05
PCNT-202ENST00000418394 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
PCNT-202ENST00000418394 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.05
PCNT-202ENST00000418394 NACADO15069 1562 aa14.63□□□□□ -0.07
PCNT-202ENST00000418394 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
PCNT-202ENST00000418394 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
PCNT-202ENST00000418394 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
PCNT-202ENST00000418394 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
PCNT-202ENST00000418394 SCRIBQ14160 1630 aa14.36□□□□□ -0.11
PCNT-202ENST00000418394 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
PCNT-202ENST00000418394 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
PCNT-202ENST00000418394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
PCNT-202ENST00000418394 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
PCNT-202ENST00000418394 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
PCNT-202ENST00000418394 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
PCNT-202ENST00000418394 BICRAQ9NZM4 1560 aa13.97□□□□□ -0.17
PCNT-202ENST00000418394 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
PCNT-202ENST00000418394 C1QBPQ07021 282 aaKnown RBP13.92□□□□□ -0.18
PCNT-202ENST00000418394 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
PCNT-202ENST00000418394 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
PCNT-202ENST00000418394 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.2
PCNT-202ENST00000418394 BAZ1AQ9NRL2 1556 aaPredicted RBP13.82□□□□□ -0.2
PCNT-202ENST00000418394 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
PCNT-202ENST00000418394 SMARCA4P51532 1647 aa13.74□□□□□ -0.21
PCNT-202ENST00000418394 MROH2BQ7Z745 1585 aa13.69□□□□□ -0.22
PCNT-202ENST00000418394 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
PCNT-202ENST00000418394 FOXD4L1Q9NU39 408 aa13.68□□□□□ -0.22
PCNT-202ENST00000418394 EIF4G1Q04637 1599 aaKnown RBP13.65□□□□□ -0.22
PCNT-202ENST00000418394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
PCNT-202ENST00000418394 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
PCNT-202ENST00000418394 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
PCNT-202ENST00000418394 WIZO95785 1651 aa13.62□□□□□ -0.23
PCNT-202ENST00000418394 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
PCNT-202ENST00000418394 ZBTB22O15209 634 aa13.58□□□□□ -0.24
PCNT-202ENST00000418394 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
PCNT-202ENST00000418394 APLP2Q06481 763 aa13.54□□□□□ -0.24
PCNT-202ENST00000418394 PEG3Q9GZU2 1588 aa13.54□□□□□ -0.24
PCNT-202ENST00000418394 SPINK5Q9NQ38 1064 aaPredicted RBP13.52□□□□□ -0.25
PCNT-202ENST00000418394 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
PCNT-202ENST00000418394 CC2D2AQ9P2K1 1620 aa13.5□□□□□ -0.25
PCNT-202ENST00000418394 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
PCNT-202ENST00000418394 ATAD2BQ9ULI0 1458 aa13.5□□□□□ -0.25
PCNT-202ENST00000418394 CAPN15O75808 1086 aa13.49□□□□□ -0.25
PCNT-202ENST00000418394 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
PCNT-202ENST00000418394 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
PCNT-202ENST00000418394 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
PCNT-202ENST00000418394 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
PCNT-202ENST00000418394 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
PCNT-202ENST00000418394 DSG3P32926 999 aa13.32□□□□□ -0.28
PCNT-202ENST00000418394 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
PCNT-202ENST00000418394 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
PCNT-202ENST00000418394 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
PCNT-202ENST00000418394 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
PCNT-202ENST00000418394 ABCB7O75027 752 aa13.21□□□□□ -0.29
PCNT-202ENST00000418394 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
PCNT-202ENST00000418394 POLA2Q14181 598 aa13.1□□□□□ -0.31
PCNT-202ENST00000418394 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
PCNT-202ENST00000418394 LAMC3Q9Y6N6 1575 aa13.08□□□□□ -0.32
PCNT-202ENST00000418394 CFTRP13569 1480 aa13.08□□□□□ -0.32
PCNT-202ENST00000418394 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
PCNT-202ENST00000418394 PDS5BQ9NTI5 1447 aa13.01□□□□□ -0.33
PCNT-202ENST00000418394 ABCC8Q09428 1581 aa12.98□□□□□ -0.33
PCNT-202ENST00000418394 NESP48681 1621 aa12.98□□□□□ -0.33
PCNT-202ENST00000418394 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
PCNT-202ENST00000418394 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
PCNT-202ENST00000418394 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
PCNT-202ENST00000418394 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
PCNT-202ENST00000418394 KIF21AQ7Z4S6 1674 aa12.9□□□□□ -0.34
PCNT-202ENST00000418394 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
PCNT-202ENST00000418394 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
PCNT-202ENST00000418394 BIVM-ERCC5R4GMW8 1640 aa12.88□□□□□ -0.35
PCNT-202ENST00000418394 SYNJ1O43426 1573 aa12.87□□□□□ -0.35
PCNT-202ENST00000418394 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
PCNT-202ENST00000418394 CUX1P39880 1505 aa12.83□□□□□ -0.36
PCNT-202ENST00000418394 MRC2Q9UBG0 1479 aa12.81□□□□□ -0.36
PCNT-202ENST00000418394 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms