RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 NISCHQ9Y2I1 1504 aa26.51■■□□□ 1.83
LRRTM1-205ENST00000417012 CCDC180Q9P1Z9 1646 aa22.62■■□□□ 1.21
LRRTM1-205ENST00000417012 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
LRRTM1-205ENST00000417012 ZCCHC6Q5VYS8 1495 aaKnown RBP22.36■■□□□ 1.17
LRRTM1-205ENST00000417012 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
LRRTM1-205ENST00000417012 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
LRRTM1-205ENST00000417012 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
LRRTM1-205ENST00000417012 CHIC1Q5VXU3 224 aa21.33■■□□□ 1
LRRTM1-205ENST00000417012 MYO15BQ96JP2 1530 aa21.32■■□□□ 1
LRRTM1-205ENST00000417012 ABCC9O60706 1549 aa21.27■■□□□ 1
LRRTM1-205ENST00000417012 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
LRRTM1-205ENST00000417012 HRCP23327 699 aa21.24■□□□□ 0.99
LRRTM1-205ENST00000417012 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
LRRTM1-205ENST00000417012 NACADO15069 1562 aa20.98■□□□□ 0.95
LRRTM1-205ENST00000417012 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
LRRTM1-205ENST00000417012 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
LRRTM1-205ENST00000417012 RB1CC1Q8TDY2 1594 aa20.71■□□□□ 0.91
LRRTM1-205ENST00000417012 PPARGC1BQ86YN6 1023 aaKnown RBP20.7■□□□□ 0.9
LRRTM1-205ENST00000417012 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
LRRTM1-205ENST00000417012 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
LRRTM1-205ENST00000417012 TRIM26Q12899 539 aaPredicted RBP20.55■□□□□ 0.88
LRRTM1-205ENST00000417012 WIZO95785 1651 aa20.53■□□□□ 0.88
LRRTM1-205ENST00000417012 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
LRRTM1-205ENST00000417012 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
LRRTM1-205ENST00000417012 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
LRRTM1-205ENST00000417012 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
LRRTM1-205ENST00000417012 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
LRRTM1-205ENST00000417012 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
LRRTM1-205ENST00000417012 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
LRRTM1-205ENST00000417012 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
LRRTM1-205ENST00000417012 BICRAQ9NZM4 1560 aa20.19■□□□□ 0.82
LRRTM1-205ENST00000417012 TOP2AP11388 1531 aaKnown RBP20.14■□□□□ 0.82
LRRTM1-205ENST00000417012 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
LRRTM1-205ENST00000417012 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.8
LRRTM1-205ENST00000417012 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
LRRTM1-205ENST00000417012 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
LRRTM1-205ENST00000417012 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.77
LRRTM1-205ENST00000417012 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
LRRTM1-205ENST00000417012 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
LRRTM1-205ENST00000417012 SOGA1O94964 1423 aa19.74■□□□□ 0.75
LRRTM1-205ENST00000417012 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
LRRTM1-205ENST00000417012 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
LRRTM1-205ENST00000417012 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
LRRTM1-205ENST00000417012 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
LRRTM1-205ENST00000417012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
LRRTM1-205ENST00000417012 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
LRRTM1-205ENST00000417012 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
LRRTM1-205ENST00000417012 SYNJ1O43426 1573 aa19.57■□□□□ 0.72
LRRTM1-205ENST00000417012 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
LRRTM1-205ENST00000417012 CEP162Q5TB80 1403 aa19.5■□□□□ 0.71
LRRTM1-205ENST00000417012 EEA1Q15075 1411 aa19.49■□□□□ 0.71
LRRTM1-205ENST00000417012 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
LRRTM1-205ENST00000417012 ACIN1Q9UKV3 1341 aaKnown RBP19.48■□□□□ 0.71
LRRTM1-205ENST00000417012 TNIKQ9UKE5 1360 aa19.45■□□□□ 0.7
LRRTM1-205ENST00000417012 DIEXFQ68CQ4 756 aaKnown RBP19.43■□□□□ 0.7
LRRTM1-205ENST00000417012 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
LRRTM1-205ENST00000417012 GOLGA3Q08378 1498 aa19.39■□□□□ 0.7
LRRTM1-205ENST00000417012 NEUROD1Q13562 356 aa19.39■□□□□ 0.69
LRRTM1-205ENST00000417012 HMGXB3Q12766 1538 aa19.39■□□□□ 0.69
LRRTM1-205ENST00000417012 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
LRRTM1-205ENST00000417012 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
LRRTM1-205ENST00000417012 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
LRRTM1-205ENST00000417012 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
LRRTM1-205ENST00000417012 KIF21BO75037 1637 aa19.27■□□□□ 0.68
LRRTM1-205ENST00000417012 RAPGEF2Q9Y4G8 1499 aa19.26■□□□□ 0.67
LRRTM1-205ENST00000417012 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
LRRTM1-205ENST00000417012 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
LRRTM1-205ENST00000417012 CUX1P39880 1505 aa19.22■□□□□ 0.67
LRRTM1-205ENST00000417012 CFTRP13569 1480 aa19.22■□□□□ 0.67
LRRTM1-205ENST00000417012 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
LRRTM1-205ENST00000417012 CLIP1P30622 1438 aa19.19■□□□□ 0.66
LRRTM1-205ENST00000417012 MYT1Q01538 1121 aa19.17■□□□□ 0.66
LRRTM1-205ENST00000417012 CC2D2AQ9P2K1 1620 aa19.13■□□□□ 0.65
LRRTM1-205ENST00000417012 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
LRRTM1-205ENST00000417012 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
LRRTM1-205ENST00000417012 VPS8Q8N3P4 1428 aa19.05■□□□□ 0.64
LRRTM1-205ENST00000417012 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
LRRTM1-205ENST00000417012 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
LRRTM1-205ENST00000417012 KIF27Q86VH2 1401 aa19.04■□□□□ 0.64
LRRTM1-205ENST00000417012 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
LRRTM1-205ENST00000417012 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
LRRTM1-205ENST00000417012 APLP2Q06481 763 aa18.99■□□□□ 0.63
LRRTM1-205ENST00000417012 MIER1Q8N108 512 aa18.94■□□□□ 0.62
LRRTM1-205ENST00000417012 CUX2O14529 1486 aa18.94■□□□□ 0.62
LRRTM1-205ENST00000417012 FGD5Q6ZNL6 1462 aa18.91■□□□□ 0.62
LRRTM1-205ENST00000417012 ARAP1Q96P48 1450 aa18.91■□□□□ 0.62
LRRTM1-205ENST00000417012 FANCD2Q9BXW9 1451 aa18.89■□□□□ 0.61
LRRTM1-205ENST00000417012 NESP48681 1621 aa18.89■□□□□ 0.61
LRRTM1-205ENST00000417012 IGF1RP08069 1367 aa18.88■□□□□ 0.61
LRRTM1-205ENST00000417012 KANK4Q5T7N3 995 aaPredicted RBP18.83■□□□□ 0.61
LRRTM1-205ENST00000417012 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
LRRTM1-205ENST00000417012 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
LRRTM1-205ENST00000417012 CLSPNQ9HAW4 1339 aa18.79■□□□□ 0.6
LRRTM1-205ENST00000417012 CARMIL1Q5VZK9 1371 aa18.79■□□□□ 0.6
LRRTM1-205ENST00000417012 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
LRRTM1-205ENST00000417012 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
LRRTM1-205ENST00000417012 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
LRRTM1-205ENST00000417012 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
LRRTM1-205ENST00000417012 DHX57Q6P158 1386 aaKnown RBP18.72■□□□□ 0.59
LRRTM1-205ENST00000417012 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms