RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 NISCHQ9Y2I1 1504 aa29.03■■■□□ 2.24
CHEK2-210ENST00000416671 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
CHEK2-210ENST00000416671 SHROOM4Q9ULL8 1493 aa24.39■■□□□ 1.5
CHEK2-210ENST00000416671 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
CHEK2-210ENST00000416671 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
CHEK2-210ENST00000416671 ABCC9O60706 1549 aa24.02■■□□□ 1.44
CHEK2-210ENST00000416671 DCAF1Q9Y4B6 1507 aa23.82■■□□□ 1.4
CHEK2-210ENST00000416671 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
CHEK2-210ENST00000416671 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
CHEK2-210ENST00000416671 NACADO15069 1562 aa23.41■■□□□ 1.34
CHEK2-210ENST00000416671 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
CHEK2-210ENST00000416671 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
CHEK2-210ENST00000416671 HRCP23327 699 aa23.13■■□□□ 1.29
CHEK2-210ENST00000416671 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
CHEK2-210ENST00000416671 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
CHEK2-210ENST00000416671 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
CHEK2-210ENST00000416671 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
CHEK2-210ENST00000416671 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
CHEK2-210ENST00000416671 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.21
CHEK2-210ENST00000416671 PCGF6Q9BYE7 350 aa22.63■■□□□ 1.21
CHEK2-210ENST00000416671 PPARGC1BQ86YN6 1023 aaKnown RBP22.55■■□□□ 1.2
CHEK2-210ENST00000416671 MROH2BQ7Z745 1585 aa22.53■■□□□ 1.2
CHEK2-210ENST00000416671 WIZO95785 1651 aa22.36■■□□□ 1.17
CHEK2-210ENST00000416671 BAZ1AQ9NRL2 1556 aaPredicted RBP22.35■■□□□ 1.17
CHEK2-210ENST00000416671 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.16
CHEK2-210ENST00000416671 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
CHEK2-210ENST00000416671 LOC105371045A0A1W2PR82 267 aa22.24■■□□□ 1.15
CHEK2-210ENST00000416671 TRIM41Q8WV44 630 aa22.1■■□□□ 1.13
CHEK2-210ENST00000416671 TRIM26Q12899 539 aaPredicted RBP22■■□□□ 1.11
CHEK2-210ENST00000416671 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
CHEK2-210ENST00000416671 FAM9AQ8IZU1 332 aaPredicted RBP21.98■■□□□ 1.11
CHEK2-210ENST00000416671 ATAD2BQ9ULI0 1458 aa21.94■■□□□ 1.1
CHEK2-210ENST00000416671 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
CHEK2-210ENST00000416671 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
CHEK2-210ENST00000416671 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
CHEK2-210ENST00000416671 ZEB1P37275 1124 aaPredicted RBP21.87■■□□□ 1.09
CHEK2-210ENST00000416671 EHMT2Q96KQ7 1210 aa21.87■■□□□ 1.09
CHEK2-210ENST00000416671 SMARCA2P51531 1590 aa21.85■■□□□ 1.09
CHEK2-210ENST00000416671 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
CHEK2-210ENST00000416671 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
CHEK2-210ENST00000416671 NCAPD3P42695 1498 aa21.67■■□□□ 1.06
CHEK2-210ENST00000416671 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
CHEK2-210ENST00000416671 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
CHEK2-210ENST00000416671 HMGXB3Q12766 1538 aa21.58■■□□□ 1.05
CHEK2-210ENST00000416671 MYT1Q01538 1121 aa21.48■■□□□ 1.03
CHEK2-210ENST00000416671 DNAJC5BQ9UF47 199 aa21.38■■□□□ 1.01
CHEK2-210ENST00000416671 SOGA1O94964 1423 aa21.37■■□□□ 1.01
CHEK2-210ENST00000416671 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
CHEK2-210ENST00000416671 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
CHEK2-210ENST00000416671 WRNQ14191 1432 aaPredicted RBP eCLIP21.28■■□□□ 1
CHEK2-210ENST00000416671 CFTRP13569 1480 aa21.24■□□□□ 0.99
CHEK2-210ENST00000416671 NEUROD1Q13562 356 aa21.24■□□□□ 0.99
CHEK2-210ENST00000416671 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
CHEK2-210ENST00000416671 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
CHEK2-210ENST00000416671 CADPSQ9ULU8 1353 aa21.18■□□□□ 0.98
CHEK2-210ENST00000416671 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
CHEK2-210ENST00000416671 NESP48681 1621 aa21.13■□□□□ 0.97
CHEK2-210ENST00000416671 CENPBP07199 599 aaPredicted RBP21.12■□□□□ 0.97
CHEK2-210ENST00000416671 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
CHEK2-210ENST00000416671 EEA1Q15075 1411 aa21.09■□□□□ 0.97
CHEK2-210ENST00000416671 CEP162Q5TB80 1403 aa21.08■□□□□ 0.96
CHEK2-210ENST00000416671 TTBK1Q5TCY1 1321 aaPredicted RBP21.05■□□□□ 0.96
CHEK2-210ENST00000416671 CUX1P39880 1505 aa21.03■□□□□ 0.96
CHEK2-210ENST00000416671 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
CHEK2-210ENST00000416671 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
CHEK2-210ENST00000416671 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
CHEK2-210ENST00000416671 DIEXFQ68CQ4 756 aaKnown RBP21■□□□□ 0.95
CHEK2-210ENST00000416671 CCER1Q8TC90 406 aaPredicted RBP20.99■□□□□ 0.95
CHEK2-210ENST00000416671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
CHEK2-210ENST00000416671 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
CHEK2-210ENST00000416671 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
CHEK2-210ENST00000416671 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
CHEK2-210ENST00000416671 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
CHEK2-210ENST00000416671 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
CHEK2-210ENST00000416671 LAMC3Q9Y6N6 1575 aa20.88■□□□□ 0.93
CHEK2-210ENST00000416671 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
CHEK2-210ENST00000416671 KIF21BO75037 1637 aa20.85■□□□□ 0.93
CHEK2-210ENST00000416671 FGD5Q6ZNL6 1462 aa20.79■□□□□ 0.92
CHEK2-210ENST00000416671 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.92
CHEK2-210ENST00000416671 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
CHEK2-210ENST00000416671 CLIP1P30622 1438 aa20.76■□□□□ 0.91
CHEK2-210ENST00000416671 TOPBP1Q92547 1522 aa20.74■□□□□ 0.91
CHEK2-210ENST00000416671 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
CHEK2-210ENST00000416671 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
CHEK2-210ENST00000416671 RAD54L2Q9Y4B4 1467 aa20.71■□□□□ 0.91
CHEK2-210ENST00000416671 CUX2O14529 1486 aa20.69■□□□□ 0.9
CHEK2-210ENST00000416671 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
CHEK2-210ENST00000416671 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
CHEK2-210ENST00000416671 PRXQ9BXM0 1461 aa20.64■□□□□ 0.89
CHEK2-210ENST00000416671 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.89
CHEK2-210ENST00000416671 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
CHEK2-210ENST00000416671 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
CHEK2-210ENST00000416671 ERICH3Q5RHP9 1530 aa20.57■□□□□ 0.88
CHEK2-210ENST00000416671 IGF1RP08069 1367 aa20.56■□□□□ 0.88
CHEK2-210ENST00000416671 APLP2Q06481 763 aa20.53■□□□□ 0.88
CHEK2-210ENST00000416671 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.88
CHEK2-210ENST00000416671 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
CHEK2-210ENST00000416671 MRC2Q9UBG0 1479 aa20.51■□□□□ 0.87
CHEK2-210ENST00000416671 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
CHEK2-210ENST00000416671 HNRNPUL2Q1KMD3 747 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms