RNA–Protein interactions for RNA: ENST00000416457.5

CNOT10-203, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 2,096 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-203ENST00000416457 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
CNOT10-203ENST00000416457 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
CNOT10-203ENST00000416457 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
CNOT10-203ENST00000416457 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
CNOT10-203ENST00000416457 NISCHQ9Y2I1 1504 aa15.65■□□□□ 0.1
CNOT10-203ENST00000416457 FOXD1Q16676 465 aa15.32■□□□□ 0.04
CNOT10-203ENST00000416457 POTEDQ86YR6 584 aa14.48□□□□□ -0.09
CNOT10-203ENST00000416457 MSH5O43196 834 aa14.44□□□□□ -0.1
CNOT10-203ENST00000416457 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
CNOT10-203ENST00000416457 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.12
CNOT10-203ENST00000416457 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
CNOT10-203ENST00000416457 ADRA2BP18089 450 aa14.1□□□□□ -0.15
CNOT10-203ENST00000416457 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
CNOT10-203ENST00000416457 ABCC9O60706 1549 aa13.26□□□□□ -0.29
CNOT10-203ENST00000416457 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
CNOT10-203ENST00000416457 ZCCHC6Q5VYS8 1495 aaKnown RBP13.09□□□□□ -0.31
CNOT10-203ENST00000416457 DCAF8L2P0C7V8 631 aa13.06□□□□□ -0.32
CNOT10-203ENST00000416457 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
CNOT10-203ENST00000416457 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
CNOT10-203ENST00000416457 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
CNOT10-203ENST00000416457 DCAF1Q9Y4B6 1507 aa12.89□□□□□ -0.35
CNOT10-203ENST00000416457 NACADO15069 1562 aa12.83□□□□□ -0.36
CNOT10-203ENST00000416457 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.36
CNOT10-203ENST00000416457 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.36
CNOT10-203ENST00000416457 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
CNOT10-203ENST00000416457 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
CNOT10-203ENST00000416457 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.39
CNOT10-203ENST00000416457 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
CNOT10-203ENST00000416457 CACNB1Q02641 598 aaPredicted RBP12.53□□□□□ -0.4
CNOT10-203ENST00000416457 PPP4R3CPQ6ZMV5 832 aa12.49□□□□□ -0.41
CNOT10-203ENST00000416457 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
CNOT10-203ENST00000416457 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
CNOT10-203ENST00000416457 BICRAQ9NZM4 1560 aa12.46□□□□□ -0.41
CNOT10-203ENST00000416457 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
CNOT10-203ENST00000416457 CNKSR2Q8WXI2 1034 aa12.31□□□□□ -0.44
CNOT10-203ENST00000416457 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
CNOT10-203ENST00000416457 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
CNOT10-203ENST00000416457 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
CNOT10-203ENST00000416457 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
CNOT10-203ENST00000416457 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
CNOT10-203ENST00000416457 EIF4G1Q04637 1599 aaKnown RBP12.08□□□□□ -0.48
CNOT10-203ENST00000416457 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
CNOT10-203ENST00000416457 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
CNOT10-203ENST00000416457 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
CNOT10-203ENST00000416457 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
CNOT10-203ENST00000416457 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
CNOT10-203ENST00000416457 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.49
CNOT10-203ENST00000416457 WIZO95785 1651 aa11.99□□□□□ -0.49
CNOT10-203ENST00000416457 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
CNOT10-203ENST00000416457 NCBP3Q53F19 620 aaKnown RBP11.95□□□□□ -0.5
CNOT10-203ENST00000416457 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
CNOT10-203ENST00000416457 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
CNOT10-203ENST00000416457 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
CNOT10-203ENST00000416457 NCAPD3P42695 1498 aa11.88□□□□□ -0.51
CNOT10-203ENST00000416457 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
CNOT10-203ENST00000416457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.518e-6■□□□□ 8.2
CNOT10-203ENST00000416457 TOP2AP11388 1531 aaKnown RBP11.81□□□□□ -0.52
CNOT10-203ENST00000416457 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
CNOT10-203ENST00000416457 NPM3O75607 178 aaKnown RBP11.77□□□□□ -0.53
CNOT10-203ENST00000416457 AMER1Q5JTC6 1135 aaPredicted RBP11.77□□□□□ -0.53
CNOT10-203ENST00000416457 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
CNOT10-203ENST00000416457 DAXXQ9UER7 740 aaPredicted RBP11.74□□□□□ -0.53
CNOT10-203ENST00000416457 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
CNOT10-203ENST00000416457 KCNA4P22459 653 aa11.73□□□□□ -0.53
CNOT10-203ENST00000416457 NESP48681 1621 aa11.58□□□□□ -0.56
CNOT10-203ENST00000416457 CADPSQ9ULU8 1353 aa11.57□□□□□ -0.56
CNOT10-203ENST00000416457 CFTRP13569 1480 aa11.55□□□□□ -0.56
CNOT10-203ENST00000416457 U3KPZ7 1027 aaPredicted RBP11.55□□□□□ -0.56
CNOT10-203ENST00000416457 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
CNOT10-203ENST00000416457 CAPN15O75808 1086 aa11.46□□□□□ -0.57
CNOT10-203ENST00000416457 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
CNOT10-203ENST00000416457 DSG3P32926 999 aa11.44□□□□□ -0.58
CNOT10-203ENST00000416457 FANCD2Q9BXW9 1451 aa11.43□□□□□ -0.58
CNOT10-203ENST00000416457 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
CNOT10-203ENST00000416457 ABCC8Q09428 1581 aa11.42□□□□□ -0.58
CNOT10-203ENST00000416457 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
CNOT10-203ENST00000416457 PDS5BQ9NTI5 1447 aa11.41□□□□□ -0.58
CNOT10-203ENST00000416457 KIF21AQ7Z4S6 1674 aa11.39□□□□□ -0.59
CNOT10-203ENST00000416457 CEP164Q9UPV0 1460 aa11.36□□□□□ -0.59
CNOT10-203ENST00000416457 ERCC6Q03468 1493 aa11.35□□□□□ -0.59
CNOT10-203ENST00000416457 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
CNOT10-203ENST00000416457 CUX1P39880 1505 aa11.32□□□□□ -0.6
CNOT10-203ENST00000416457 URB2Q14146 1524 aaKnown RBP11.32□□□□□ -0.6
CNOT10-203ENST00000416457 SYNJ1O43426 1573 aa11.32□□□□□ -0.6
CNOT10-203ENST00000416457 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
CNOT10-203ENST00000416457 POTEHQ6S545 545 aa11.31□□□□□ -0.6
CNOT10-203ENST00000416457 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
CNOT10-203ENST00000416457 TOPBP1Q92547 1522 aa11.28□□□□□ -0.6
CNOT10-203ENST00000416457 MRC2Q9UBG0 1479 aa11.28□□□□□ -0.6
CNOT10-203ENST00000416457 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
CNOT10-203ENST00000416457 TOP2BQ02880 1626 aa11.26□□□□□ -0.61
CNOT10-203ENST00000416457 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
CNOT10-203ENST00000416457 BIVM-ERCC5R4GMW8 1640 aa11.25□□□□□ -0.61
CNOT10-203ENST00000416457 WDR62O43379 1518 aa11.24□□□□□ -0.61
CNOT10-203ENST00000416457 FGD5Q6ZNL6 1462 aa11.23□□□□□ -0.61
CNOT10-203ENST00000416457 POLA1P09884 1462 aaPredicted RBP11.22□□□□□ -0.61
CNOT10-203ENST00000416457 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
CNOT10-203ENST00000416457 APLP2Q06481 763 aa11.22□□□□□ -0.61
CNOT10-203ENST00000416457 SLC4A1APQ9BWU0 796 aaKnown RBP11.21□□□□□ -0.62
CNOT10-203ENST00000416457 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms