RNA–Protein interactions for RNA: ENST00000415569.5

GTDC1-208, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 2,780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-208ENST00000415569 AEBP2Q6ZN18 517 aaPredicted RBP10.59□□□□□ -0.71
GTDC1-208ENST00000415569 CHIC1Q5VXU3 224 aa10.52□□□□□ -0.73
GTDC1-208ENST00000415569 NISCHQ9Y2I1 1504 aa10.01□□□□□ -0.81
GTDC1-208ENST00000415569 PHF23Q9BUL5 403 aaPredicted RBP9.33□□□□□ -0.92
GTDC1-208ENST00000415569 SENP3Q9H4L4 574 aaPredicted RBP8.87□□□□□ -0.99
GTDC1-208ENST00000415569 CCDC180Q9P1Z9 1646 aa8.72□□□□□ -1.01
GTDC1-208ENST00000415569 PLPPR3Q6T4P5 718 aa8.65□□□□□ -1.02
GTDC1-208ENST00000415569 ZCCHC6Q5VYS8 1495 aaKnown RBP8.45□□□□□ -1.06
GTDC1-208ENST00000415569 DCAF1Q9Y4B6 1507 aa8.3□□□□□ -1.08
GTDC1-208ENST00000415569 FOXD1Q16676 465 aa8.25□□□□□ -1.09
GTDC1-208ENST00000415569 ADRA2BP18089 450 aa8.18□□□□□ -1.1
GTDC1-208ENST00000415569 PPP6R1Q9UPN7 881 aa8.17□□□□□ -1.1
GTDC1-208ENST00000415569 MYO15BQ96JP2 1530 aa8.17□□□□□ -1.1
GTDC1-208ENST00000415569 SHROOM4Q9ULL8 1493 aa8.15□□□□□ -1.11
GTDC1-208ENST00000415569 ABCC9O60706 1549 aa8.08□□□□□ -1.12
GTDC1-208ENST00000415569 DCAF8L2P0C7V8 631 aa8.06□□□□□ -1.12
GTDC1-208ENST00000415569 NACADO15069 1562 aa8.06□□□□□ -1.12
GTDC1-208ENST00000415569 SCRIBQ14160 1630 aa7.99□□□□□ -1.13
GTDC1-208ENST00000415569 RB1CC1Q8TDY2 1594 aa7.95□□□□□ -1.14
GTDC1-208ENST00000415569 UNC13AQ9UPW8 1703 aa7.9□□□□□ -1.14
GTDC1-208ENST00000415569 PIAS4Q8N2W9 510 aaPredicted RBP7.86□□□□□ -1.15
GTDC1-208ENST00000415569 SUPT5HO00267 1087 aaKnown RBP7.84□□□□□ -1.15
GTDC1-208ENST00000415569 KCNA4P22459 653 aa7.83□□□□□ -1.16
GTDC1-208ENST00000415569 RSF1Q96T23 1441 aaPredicted RBP7.79□□□□□ -1.16
GTDC1-208ENST00000415569 BICRAQ9NZM4 1560 aa7.78□□□□□ -1.16
GTDC1-208ENST00000415569 CECR2Q9BXF3 1484 aa7.77□□□□□ -1.17
GTDC1-208ENST00000415569 MROH2BQ7Z745 1585 aa7.74□□□□□ -1.17
GTDC1-208ENST00000415569 BAZ1AQ9NRL2 1556 aaPredicted RBP7.7□□□□□ -1.18
GTDC1-208ENST00000415569 WIZO95785 1651 aa7.7□□□□□ -1.18
GTDC1-208ENST00000415569 SMARCA4P51532 1647 aa7.69□□□□□ -1.18
GTDC1-208ENST00000415569 PPP4R3CPQ6ZMV5 832 aa7.67□□□□□ -1.18
GTDC1-208ENST00000415569 EHMT2Q96KQ7 1210 aa7.63□□□□□ -1.19
GTDC1-208ENST00000415569 PEG3Q9GZU2 1588 aa7.62□□□□□ -1.19
GTDC1-208ENST00000415569 PABPN1Q86U42 306 aaKnown RBP eCLIP7.61□□□□□ -1.19
GTDC1-208ENST00000415569 TOP2AP11388 1531 aaKnown RBP7.61□□□□□ -1.19
GTDC1-208ENST00000415569 EIF4G1Q04637 1599 aaKnown RBP7.6□□□□□ -1.19
GTDC1-208ENST00000415569 SMARCA2P51531 1590 aa7.55□□□□□ -1.2
GTDC1-208ENST00000415569 CCDC88BA6NC98 1476 aa7.52□□□□□ -1.21
GTDC1-208ENST00000415569 ATAD2BQ9ULI0 1458 aa7.52□□□□□ -1.21
GTDC1-208ENST00000415569 NCBP3Q53F19 620 aaKnown RBP7.49□□□□□ -1.21
GTDC1-208ENST00000415569 SLC4A1APQ9BWU0 796 aaKnown RBP7.47□□□□□ -1.21
GTDC1-208ENST00000415569 NPM3O75607 178 aaKnown RBP7.46□□□□□ -1.22
GTDC1-208ENST00000415569 HMGXB3Q12766 1538 aa7.45□□□□□ -1.22
GTDC1-208ENST00000415569 MSH5O43196 834 aa7.45□□□□□ -1.22
GTDC1-208ENST00000415569 BAZ1BQ9UIG0 1483 aaKnown RBP7.45□□□□□ -1.22
GTDC1-208ENST00000415569 NCAPD3P42695 1498 aa7.43□□□□□ -1.22
GTDC1-208ENST00000415569 ABCC8Q09428 1581 aa7.39□□□□□ -1.23
GTDC1-208ENST00000415569 SCAF1Q9H7N4 1312 aaKnown RBP7.37□□□□□ -1.23
GTDC1-208ENST00000415569 CNKSR2Q8WXI2 1034 aa7.37□□□□□ -1.23
GTDC1-208ENST00000415569 TRIM41Q8WV44 630 aa7.37□□□□□ -1.23
GTDC1-208ENST00000415569 CSRNP3Q8WYN3 585 aa7.37□□□□□ -1.23
GTDC1-208ENST00000415569 CC2D2AQ9P2K1 1620 aa7.36□□□□□ -1.23
GTDC1-208ENST00000415569 MAPK8IP2Q13387 824 aaPredicted RBP7.36□□□□□ -1.23
GTDC1-208ENST00000415569 POTEDQ86YR6 584 aa7.34□□□□□ -1.23
GTDC1-208ENST00000415569 PRDM2Q13029 1718 aa7.34□□□□□ -1.24
GTDC1-208ENST00000415569 SYNJ1O43426 1573 aa7.33□□□□□ -1.24
GTDC1-208ENST00000415569 LOC105371045A0A1W2PR82 267 aa7.31□□□□□ -1.24
GTDC1-208ENST00000415569 CFTRP13569 1480 aa7.3□□□□□ -1.24
GTDC1-208ENST00000415569 BIVM-ERCC5R4GMW8 1640 aa7.29□□□□□ -1.24
GTDC1-208ENST00000415569 WRNQ14191 1432 aaPredicted RBP eCLIP7.29□□□□□ -1.24
GTDC1-208ENST00000415569 TOP2BQ02880 1626 aa7.28□□□□□ -1.24
GTDC1-208ENST00000415569 SOGA1O94964 1423 aa7.26□□□□□ -1.25
GTDC1-208ENST00000415569 RUSC2Q8N2Y8 1516 aa7.24□□□□□ -1.25
GTDC1-208ENST00000415569 CUX1P39880 1505 aa7.24□□□□□ -1.25
GTDC1-208ENST00000415569 ZBTB22O15209 634 aa7.24□□□□□ -1.25
GTDC1-208ENST00000415569 EEA1Q15075 1411 aa7.23□□□□□ -1.25
GTDC1-208ENST00000415569 FAM9AQ8IZU1 332 aaPredicted RBP7.22□□□□□ -1.25
GTDC1-208ENST00000415569 CADPSQ9ULU8 1353 aa7.22□□□□□ -1.25
GTDC1-208ENST00000415569 KIF21BO75037 1637 aa7.19□□□□□ -1.26
GTDC1-208ENST00000415569 RNF216Q9NWF9 866 aaPredicted RBP7.17□□□□□ -1.26
GTDC1-208ENST00000415569 LAMC3Q9Y6N6 1575 aa7.17□□□□□ -1.26
GTDC1-208ENST00000415569 NESP48681 1621 aa7.16□□□□□ -1.26
GTDC1-208ENST00000415569 FANCD2Q9BXW9 1451 aa7.15□□□□□ -1.26
GTDC1-208ENST00000415569 DNAJC5BQ9UF47 199 aa7.15□□□□□ -1.26
GTDC1-208ENST00000415569 GOLGA3Q08378 1498 aa7.14□□□□□ -1.27
GTDC1-208ENST00000415569 TNIKQ9UKE5 1360 aa7.14□□□□□ -1.27
GTDC1-208ENST00000415569 DNMBPQ6XZF7 1577 aa7.13□□□□□ -1.27
GTDC1-208ENST00000415569 CEP164Q9UPV0 1460 aa7.13□□□□□ -1.27
GTDC1-208ENST00000415569 DMRT2Q9Y5R5 561 aa7.13□□□□□ -1.27
GTDC1-208ENST00000415569 PRXQ9BXM0 1461 aa7.12□□□□□ -1.27
GTDC1-208ENST00000415569 ERICH3Q5RHP9 1530 aa7.11□□□□□ -1.27
GTDC1-208ENST00000415569 KIF21AQ7Z4S6 1674 aa7.11□□□□□ -1.27
GTDC1-208ENST00000415569 FGD5Q6ZNL6 1462 aa7.11□□□□□ -1.27
GTDC1-208ENST00000415569 RAPGEF2Q9Y4G8 1499 aa7.11□□□□□ -1.27
GTDC1-208ENST00000415569 CEP162Q5TB80 1403 aa7.11□□□□□ -1.27
GTDC1-208ENST00000415569 TOPBP1Q92547 1522 aa7.11□□□□□ -1.27
GTDC1-208ENST00000415569 WDR97A6NE52 1622 aa7.11□□□□□ -1.27
GTDC1-208ENST00000415569 URB2Q14146 1524 aaKnown RBP7.1□□□□□ -1.27
GTDC1-208ENST00000415569 FOXD4L1Q9NU39 408 aa7.08□□□□□ -1.28
GTDC1-208ENST00000415569 KIF27Q86VH2 1401 aa7.08□□□□□ -1.28
GTDC1-208ENST00000415569 POLA1P09884 1462 aaPredicted RBP7.08□□□□□ -1.28
GTDC1-208ENST00000415569 HOXD11P31277 338 aaPredicted RBP7.07□□□□□ -1.28
GTDC1-208ENST00000415569 ABCA10Q8WWZ4 1543 aa7.07□□□□□ -1.28
GTDC1-208ENST00000415569 CUX2O14529 1486 aa7.06□□□□□ -1.28
GTDC1-208ENST00000415569 PDS5BQ9NTI5 1447 aa7.05□□□□□ -1.28
GTDC1-208ENST00000415569 IGF1RP08069 1367 aa7.05□□□□□ -1.28
GTDC1-208ENST00000415569 RAD54L2Q9Y4B4 1467 aa7.05□□□□□ -1.28
GTDC1-208ENST00000415569 ABCA5Q8WWZ7 1642 aa7.04□□□□□ -1.28
GTDC1-208ENST00000415569 TARBP1Q13395 1621 aaKnown RBP7.04□□□□□ -1.28
GTDC1-208ENST00000415569 PCGF6Q9BYE7 350 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms