RNA–Protein interactions for RNA: ENST00000415439.5

RAD18-203, Transcript of RAD18, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RAD18, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD18-203ENST00000415439 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
RAD18-203ENST00000415439 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
RAD18-203ENST00000415439 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
RAD18-203ENST00000415439 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
RAD18-203ENST00000415439 NISCHQ9Y2I1 1504 aa16.22■□□□□ 0.19
RAD18-203ENST00000415439 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
RAD18-203ENST00000415439 FOXD1Q16676 465 aa15.24■□□□□ 0.03
RAD18-203ENST00000415439 MSH5O43196 834 aa14.85□□□□□ -0.03
RAD18-203ENST00000415439 CCDC180Q9P1Z9 1646 aa14.65□□□□□ -0.06
RAD18-203ENST00000415439 ABCC9O60706 1549 aa14.65□□□□□ -0.06
RAD18-203ENST00000415439 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
RAD18-203ENST00000415439 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
RAD18-203ENST00000415439 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
RAD18-203ENST00000415439 DNAJC5BQ9UF47 199 aa13.83□□□□□ -0.2
RAD18-203ENST00000415439 NACADO15069 1562 aa13.79□□□□□ -0.2
RAD18-203ENST00000415439 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
RAD18-203ENST00000415439 ADRA2BP18089 450 aa13.61□□□□□ -0.23
RAD18-203ENST00000415439 BICRAQ9NZM4 1560 aa13.6□□□□□ -0.23
RAD18-203ENST00000415439 PPP6R1Q9UPN7 881 aa13.6□□□□□ -0.23
RAD18-203ENST00000415439 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
RAD18-203ENST00000415439 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
RAD18-203ENST00000415439 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAD18-203ENST00000415439 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
RAD18-203ENST00000415439 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
RAD18-203ENST00000415439 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
RAD18-203ENST00000415439 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
RAD18-203ENST00000415439 SHROOM4Q9ULL8 1493 aa13.32□□□□□ -0.28
RAD18-203ENST00000415439 CC2D2AQ9P2K1 1620 aa13.29□□□□□ -0.28
RAD18-203ENST00000415439 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
RAD18-203ENST00000415439 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
RAD18-203ENST00000415439 NCAPD3P42695 1498 aa12.73□□□□□ -0.37
RAD18-203ENST00000415439 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
RAD18-203ENST00000415439 SMARCA4P51532 1647 aa12.71□□□□□ -0.37
RAD18-203ENST00000415439 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
RAD18-203ENST00000415439 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
RAD18-203ENST00000415439 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
RAD18-203ENST00000415439 CUX2O14529 1486 aa12.64□□□□□ -0.39
RAD18-203ENST00000415439 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
RAD18-203ENST00000415439 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
RAD18-203ENST00000415439 NESP48681 1621 aa12.61□□□□□ -0.39
RAD18-203ENST00000415439 SCAF1Q9H7N4 1312 aaKnown RBP12.6□□□□□ -0.39
RAD18-203ENST00000415439 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
RAD18-203ENST00000415439 POTEHQ6S545 545 aa12.59□□□□□ -0.39
RAD18-203ENST00000415439 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
RAD18-203ENST00000415439 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
RAD18-203ENST00000415439 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
RAD18-203ENST00000415439 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
RAD18-203ENST00000415439 KIF21AQ7Z4S6 1674 aa12.52□□□□□ -0.41
RAD18-203ENST00000415439 MAPK8IP2Q13387 824 aaPredicted RBP12.51□□□□□ -0.41
RAD18-203ENST00000415439 LAMC3Q9Y6N6 1575 aa12.49□□□□□ -0.41
RAD18-203ENST00000415439 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
RAD18-203ENST00000415439 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
RAD18-203ENST00000415439 WIZO95785 1651 aa12.4□□□□□ -0.42
RAD18-203ENST00000415439 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
RAD18-203ENST00000415439 WDR62O43379 1518 aa12.31□□□□□ -0.44
RAD18-203ENST00000415439 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
RAD18-203ENST00000415439 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
RAD18-203ENST00000415439 MRC2Q9UBG0 1479 aa12.28□□□□□ -0.44
RAD18-203ENST00000415439 DCAF8L1A6NGE4 600 aa12.24□□□□□ -0.45
RAD18-203ENST00000415439 CEP164Q9UPV0 1460 aa12.22□□□□□ -0.45
RAD18-203ENST00000415439 FANCD2Q9BXW9 1451 aa12.2□□□□□ -0.46
RAD18-203ENST00000415439 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
RAD18-203ENST00000415439 CNKSR2Q8WXI2 1034 aa12.19□□□□□ -0.46
RAD18-203ENST00000415439 CFTRP13569 1480 aa12.19□□□□□ -0.46
RAD18-203ENST00000415439 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
RAD18-203ENST00000415439 RSF1Q96T23 1441 aaPredicted RBP12.18□□□□□ -0.46
RAD18-203ENST00000415439 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
RAD18-203ENST00000415439 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
RAD18-203ENST00000415439 TRIM41Q8WV44 630 aa12.07□□□□□ -0.48
RAD18-203ENST00000415439 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.48
RAD18-203ENST00000415439 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
RAD18-203ENST00000415439 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
RAD18-203ENST00000415439 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
RAD18-203ENST00000415439 EIF4G3O43432 1585 aaKnown RBP11.98□□□□□ -0.49
RAD18-203ENST00000415439 RIMBP3CA6NJZ7 1639 aa11.98□□□□□ -0.49
RAD18-203ENST00000415439 RIMBP3BA6NNM3 1639 aa11.98□□□□□ -0.49
RAD18-203ENST00000415439 RIMBP3Q9UFD9 1639 aa11.98□□□□□ -0.49
RAD18-203ENST00000415439 TOPBP1Q92547 1522 aa11.97□□□□□ -0.49
RAD18-203ENST00000415439 OSCARQ8IYS5 282 aa11.96□□□□□ -0.49
RAD18-203ENST00000415439 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
RAD18-203ENST00000415439 TARBP1Q13395 1621 aaKnown RBP11.94□□□□□ -0.5
RAD18-203ENST00000415439 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
RAD18-203ENST00000415439 CHD1O14646 1710 aa11.93□□□□□ -0.5
RAD18-203ENST00000415439 ARHGEF11O15085 1522 aa11.91□□□□□ -0.5
RAD18-203ENST00000415439 ABCC8Q09428 1581 aa11.87□□□□□ -0.51
RAD18-203ENST00000415439 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
RAD18-203ENST00000415439 POLA1P09884 1462 aaPredicted RBP11.85□□□□□ -0.51
RAD18-203ENST00000415439 AQRO60306 1485 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■□□ 16.1
RAD18-203ENST00000415439 KCNA4P22459 653 aa11.84□□□□□ -0.51
RAD18-203ENST00000415439 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
RAD18-203ENST00000415439 WDR97A6NE52 1622 aa11.8□□□□□ -0.52
RAD18-203ENST00000415439 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
RAD18-203ENST00000415439 CUX1P39880 1505 aa11.77□□□□□ -0.53
RAD18-203ENST00000415439 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
RAD18-203ENST00000415439 CLASP1Q7Z460 1538 aa11.75□□□□□ -0.53
RAD18-203ENST00000415439 PBRM1Q86U86 1689 aa11.74□□□□□ -0.53
RAD18-203ENST00000415439 SNAPC4Q5SXM2 1469 aa11.73□□□□□ -0.53
RAD18-203ENST00000415439 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
RAD18-203ENST00000415439 SOGA1O94964 1423 aa11.73□□□□□ -0.53
RAD18-203ENST00000415439 CYB5RLQ6IPT4 315 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms