RNA–Protein interactions for RNA: ENST00000411817.2

ITGA9-202, Transcript of integrin subunit alpha 9, humanhuman

TSL 5

Gene ITGA9, Length 609 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-202ENST00000411817 AEBP2Q6ZN18 517 aaPredicted RBP31.42■■■□□ 2.62
ITGA9-202ENST00000411817 CHIC1Q5VXU3 224 aa29.52■■■□□ 2.32
ITGA9-202ENST00000411817 SENP3Q9H4L4 574 aaPredicted RBP26.8■■□□□ 1.88
ITGA9-202ENST00000411817 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
ITGA9-202ENST00000411817 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
ITGA9-202ENST00000411817 FOXD1Q16676 465 aa25.04■■□□□ 1.6
ITGA9-202ENST00000411817 MSH5O43196 834 aa23.51■■□□□ 1.35
ITGA9-202ENST00000411817 POTEDQ86YR6 584 aa23.47■■□□□ 1.35
ITGA9-202ENST00000411817 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
ITGA9-202ENST00000411817 PIAS4Q8N2W9 510 aaPredicted RBP23.32■■□□□ 1.32
ITGA9-202ENST00000411817 PPP6R1Q9UPN7 881 aa23.2■■□□□ 1.3
ITGA9-202ENST00000411817 ADRA2BP18089 450 aa23.1■■□□□ 1.29
ITGA9-202ENST00000411817 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
ITGA9-202ENST00000411817 MAPK8IP2Q13387 824 aaPredicted RBP21.31■■□□□ 1
ITGA9-202ENST00000411817 DMRT2Q9Y5R5 561 aa21.22■□□□□ 0.99
ITGA9-202ENST00000411817 ABCC9O60706 1549 aa21.09■□□□□ 0.97
ITGA9-202ENST00000411817 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.97
ITGA9-202ENST00000411817 ZCCHC6Q5VYS8 1495 aaKnown RBP20.98■□□□□ 0.95
ITGA9-202ENST00000411817 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
ITGA9-202ENST00000411817 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
ITGA9-202ENST00000411817 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.9
ITGA9-202ENST00000411817 NACADO15069 1562 aa20.61■□□□□ 0.89
ITGA9-202ENST00000411817 PPP4R3CPQ6ZMV5 832 aa20.52■□□□□ 0.88
ITGA9-202ENST00000411817 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
ITGA9-202ENST00000411817 CACNB1Q02641 598 aaPredicted RBP20.36■□□□□ 0.85
ITGA9-202ENST00000411817 DCAF8L1A6NGE4 600 aa20.35■□□□□ 0.85
ITGA9-202ENST00000411817 HOXD11P31277 338 aaPredicted RBP20.32■□□□□ 0.84
ITGA9-202ENST00000411817 SCRIBQ14160 1630 aa20.18■□□□□ 0.82
ITGA9-202ENST00000411817 CNKSR2Q8WXI2 1034 aa20.18■□□□□ 0.82
ITGA9-202ENST00000411817 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
ITGA9-202ENST00000411817 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
ITGA9-202ENST00000411817 RNF216Q9NWF9 866 aaPredicted RBP20.09■□□□□ 0.81
ITGA9-202ENST00000411817 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
ITGA9-202ENST00000411817 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
ITGA9-202ENST00000411817 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.76
ITGA9-202ENST00000411817 C1QBPQ07021 282 aaKnown RBP19.73■□□□□ 0.75
ITGA9-202ENST00000411817 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
ITGA9-202ENST00000411817 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
ITGA9-202ENST00000411817 CECR2Q9BXF3 1484 aa19.45■□□□□ 0.7
ITGA9-202ENST00000411817 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
ITGA9-202ENST00000411817 NPM3O75607 178 aaKnown RBP19.37■□□□□ 0.69
ITGA9-202ENST00000411817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.69
ITGA9-202ENST00000411817 SMARCA4P51532 1647 aa19.34■□□□□ 0.69
ITGA9-202ENST00000411817 EIF4G1Q04637 1599 aaKnown RBP19.32■□□□□ 0.68
ITGA9-202ENST00000411817 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
ITGA9-202ENST00000411817 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.68
ITGA9-202ENST00000411817 SUPT5HO00267 1087 aaKnown RBP19.17■□□□□ 0.66
ITGA9-202ENST00000411817 WIZO95785 1651 aa19.15■□□□□ 0.66
ITGA9-202ENST00000411817 PEG3Q9GZU2 1588 aa19.14■□□□□ 0.65
ITGA9-202ENST00000411817 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
ITGA9-202ENST00000411817 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
ITGA9-202ENST00000411817 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
ITGA9-202ENST00000411817 NCAPD3P42695 1498 aa18.99■□□□□ 0.63
ITGA9-202ENST00000411817 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
ITGA9-202ENST00000411817 TOP2AP11388 1531 aaKnown RBP18.96■□□□□ 0.63
ITGA9-202ENST00000411817 HMGXB3Q12766 1538 aa18.96■□□□□ 0.63
ITGA9-202ENST00000411817 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
ITGA9-202ENST00000411817 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
ITGA9-202ENST00000411817 KCNA4P22459 653 aa18.75■□□□□ 0.59
ITGA9-202ENST00000411817 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
ITGA9-202ENST00000411817 CAPN15O75808 1086 aa18.71■□□□□ 0.59
ITGA9-202ENST00000411817 DSG3P32926 999 aa18.68■□□□□ 0.58
ITGA9-202ENST00000411817 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
ITGA9-202ENST00000411817 CFTRP13569 1480 aa18.46■□□□□ 0.55
ITGA9-202ENST00000411817 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
ITGA9-202ENST00000411817 PRDM2Q13029 1718 aa18.44■□□□□ 0.54
ITGA9-202ENST00000411817 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
ITGA9-202ENST00000411817 NESP48681 1621 aa18.4■□□□□ 0.54
ITGA9-202ENST00000411817 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
ITGA9-202ENST00000411817 POTEHQ6S545 545 aa18.33■□□□□ 0.52
ITGA9-202ENST00000411817 APLP2Q06481 763 aa18.32■□□□□ 0.52
ITGA9-202ENST00000411817 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
ITGA9-202ENST00000411817 ABCB7O75027 752 aa18.28■□□□□ 0.52
ITGA9-202ENST00000411817 FANCD2Q9BXW9 1451 aa18.27■□□□□ 0.52
ITGA9-202ENST00000411817 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
ITGA9-202ENST00000411817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
ITGA9-202ENST00000411817 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
ITGA9-202ENST00000411817 KIF21AQ7Z4S6 1674 aa18.23■□□□□ 0.51
ITGA9-202ENST00000411817 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
ITGA9-202ENST00000411817 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
ITGA9-202ENST00000411817 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
ITGA9-202ENST00000411817 SAMD1Q6SPF0 538 aaPredicted RBP18.14■□□□□ 0.49
ITGA9-202ENST00000411817 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
ITGA9-202ENST00000411817 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
ITGA9-202ENST00000411817 CUX1P39880 1505 aa18.1■□□□□ 0.49
ITGA9-202ENST00000411817 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
ITGA9-202ENST00000411817 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
ITGA9-202ENST00000411817 TOP2BQ02880 1626 aa18.08■□□□□ 0.48
ITGA9-202ENST00000411817 DNMBPQ6XZF7 1577 aa18.07■□□□□ 0.48
ITGA9-202ENST00000411817 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
ITGA9-202ENST00000411817 URB2Q14146 1524 aaKnown RBP18.06■□□□□ 0.48
ITGA9-202ENST00000411817 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
ITGA9-202ENST00000411817 THOC2Q8NI27 1593 aaKnown RBP18.03■□□□□ 0.48
ITGA9-202ENST00000411817 WDR62O43379 1518 aa17.99■□□□□ 0.47
ITGA9-202ENST00000411817 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
ITGA9-202ENST00000411817 POLA1P09884 1462 aaPredicted RBP17.91■□□□□ 0.46
ITGA9-202ENST00000411817 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
ITGA9-202ENST00000411817 SOGA1O94964 1423 aa17.84■□□□□ 0.45
ITGA9-202ENST00000411817 CUX2O14529 1486 aa17.83■□□□□ 0.45
ITGA9-202ENST00000411817 RAD54L2Q9Y4B4 1467 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms