RNA–Protein interactions for RNA: ENST00000407365.5

TBC1D1-206, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 2,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-206ENST00000407365 NISCHQ9Y2I1 1504 aa30.44■■■□□ 2.46
TBC1D1-206ENST00000407365 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
TBC1D1-206ENST00000407365 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
TBC1D1-206ENST00000407365 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
TBC1D1-206ENST00000407365 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
TBC1D1-206ENST00000407365 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
TBC1D1-206ENST00000407365 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
TBC1D1-206ENST00000407365 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
TBC1D1-206ENST00000407365 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
TBC1D1-206ENST00000407365 ABCC9O60706 1549 aa24.44■■□□□ 1.5
TBC1D1-206ENST00000407365 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
TBC1D1-206ENST00000407365 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
TBC1D1-206ENST00000407365 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
TBC1D1-206ENST00000407365 NACADO15069 1562 aa23.97■■□□□ 1.43
TBC1D1-206ENST00000407365 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
TBC1D1-206ENST00000407365 PCGF6Q9BYE7 350 aa23.87■■□□□ 1.41
TBC1D1-206ENST00000407365 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
TBC1D1-206ENST00000407365 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
TBC1D1-206ENST00000407365 FAM9AQ8IZU1 332 aaPredicted RBP23.77■■□□□ 1.4
TBC1D1-206ENST00000407365 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
TBC1D1-206ENST00000407365 EHMT2Q96KQ7 1210 aa23.73■■□□□ 1.39
TBC1D1-206ENST00000407365 WIZO95785 1651 aa23.6■■□□□ 1.37
TBC1D1-206ENST00000407365 HRCP23327 699 aa23.55■■□□□ 1.36
TBC1D1-206ENST00000407365 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
TBC1D1-206ENST00000407365 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
TBC1D1-206ENST00000407365 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
TBC1D1-206ENST00000407365 TRIM26Q12899 539 aaPredicted RBP23.28■■□□□ 1.32
TBC1D1-206ENST00000407365 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
TBC1D1-206ENST00000407365 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
TBC1D1-206ENST00000407365 CCDC88BA6NC98 1476 aa23.14■■□□□ 1.29
TBC1D1-206ENST00000407365 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
TBC1D1-206ENST00000407365 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
TBC1D1-206ENST00000407365 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
TBC1D1-206ENST00000407365 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
TBC1D1-206ENST00000407365 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
TBC1D1-206ENST00000407365 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
TBC1D1-206ENST00000407365 SOGA1O94964 1423 aa22.86■■□□□ 1.25
TBC1D1-206ENST00000407365 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
TBC1D1-206ENST00000407365 UBTFP17480 764 aaKnown RBP22.75■■□□□ 1.23
TBC1D1-206ENST00000407365 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
TBC1D1-206ENST00000407365 CSRNP3Q8WYN3 585 aa22.71■■□□□ 1.23
TBC1D1-206ENST00000407365 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
TBC1D1-206ENST00000407365 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
TBC1D1-206ENST00000407365 PEG3Q9GZU2 1588 aa22.64■■□□□ 1.21
TBC1D1-206ENST00000407365 CEP162Q5TB80 1403 aa22.61■■□□□ 1.21
TBC1D1-206ENST00000407365 ZEB1P37275 1124 aaPredicted RBP22.58■■□□□ 1.21
TBC1D1-206ENST00000407365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
TBC1D1-206ENST00000407365 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
TBC1D1-206ENST00000407365 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
TBC1D1-206ENST00000407365 SYNJ1O43426 1573 aa22.52■■□□□ 1.2
TBC1D1-206ENST00000407365 EEA1Q15075 1411 aa22.49■■□□□ 1.19
TBC1D1-206ENST00000407365 CCER1Q8TC90 406 aaPredicted RBP22.45■■□□□ 1.18
TBC1D1-206ENST00000407365 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
TBC1D1-206ENST00000407365 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
TBC1D1-206ENST00000407365 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.16
TBC1D1-206ENST00000407365 CLIP1P30622 1438 aa22.25■■□□□ 1.15
TBC1D1-206ENST00000407365 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
TBC1D1-206ENST00000407365 HNRNPUL2Q1KMD3 747 aaKnown RBP22.18■■□□□ 1.14
TBC1D1-206ENST00000407365 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
TBC1D1-206ENST00000407365 KIF21BO75037 1637 aa22.17■■□□□ 1.14
TBC1D1-206ENST00000407365 APLP2Q06481 763 aa22.16■■□□□ 1.14
TBC1D1-206ENST00000407365 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
TBC1D1-206ENST00000407365 CUX1P39880 1505 aa22.08■■□□□ 1.13
TBC1D1-206ENST00000407365 VPS8Q8N3P4 1428 aa22.05■■□□□ 1.12
TBC1D1-206ENST00000407365 CFTRP13569 1480 aa22.04■■□□□ 1.12
TBC1D1-206ENST00000407365 BIVM-ERCC5R4GMW8 1640 aa22.03■■□□□ 1.12
TBC1D1-206ENST00000407365 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
TBC1D1-206ENST00000407365 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
TBC1D1-206ENST00000407365 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
TBC1D1-206ENST00000407365 KANK4Q5T7N3 995 aaPredicted RBP21.88■■□□□ 1.09
TBC1D1-206ENST00000407365 CUX2O14529 1486 aa21.86■■□□□ 1.09
TBC1D1-206ENST00000407365 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
TBC1D1-206ENST00000407365 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
TBC1D1-206ENST00000407365 DIEXFQ68CQ4 756 aaKnown RBP21.84■■□□□ 1.09
TBC1D1-206ENST00000407365 ARAP1Q96P48 1450 aa21.83■■□□□ 1.09
TBC1D1-206ENST00000407365 IGF1RP08069 1367 aa21.78■■□□□ 1.08
TBC1D1-206ENST00000407365 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
TBC1D1-206ENST00000407365 ITGAEP38570 1179 aa21.75■■□□□ 1.07
TBC1D1-206ENST00000407365 P3H3Q8IVL6 736 aa21.74■■□□□ 1.07
TBC1D1-206ENST00000407365 CARMIL1Q5VZK9 1371 aa21.71■■□□□ 1.07
TBC1D1-206ENST00000407365 ARHGAP35Q9NRY4 1499 aa21.71■■□□□ 1.07
TBC1D1-206ENST00000407365 NESP48681 1621 aa21.7■■□□□ 1.06
TBC1D1-206ENST00000407365 FANCD2Q9BXW9 1451 aa21.7■■□□□ 1.06
TBC1D1-206ENST00000407365 ATP1B4Q9UN42 357 aaPredicted RBP21.69■■□□□ 1.06
TBC1D1-206ENST00000407365 ZNF316A6NFI3 1004 aaPredicted RBP21.68■■□□□ 1.06
TBC1D1-206ENST00000407365 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
TBC1D1-206ENST00000407365 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
TBC1D1-206ENST00000407365 PRDM2Q13029 1718 aa21.65■■□□□ 1.06
TBC1D1-206ENST00000407365 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
TBC1D1-206ENST00000407365 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
TBC1D1-206ENST00000407365 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
TBC1D1-206ENST00000407365 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
TBC1D1-206ENST00000407365 YTHDC1Q96MU7 727 aaKnown RBP21.51■■□□□ 1.03
TBC1D1-206ENST00000407365 CCNB3Q8WWL7 1395 aa21.5■■□□□ 1.03
TBC1D1-206ENST00000407365 DHX57Q6P158 1386 aaKnown RBP21.49■■□□□ 1.03
TBC1D1-206ENST00000407365 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
TBC1D1-206ENST00000407365 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
TBC1D1-206ENST00000407365 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
TBC1D1-206ENST00000407365 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.03
TBC1D1-206ENST00000407365 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms