RNA–Protein interactions for RNA: ENST00000406666.2

AL138729.1-201, humanhuman

BASIC

Gene AL138729.1, Length 664 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL138729.1-201ENST00000406666 AEBP2Q6ZN18 517 aaPredicted RBP33■■■□□ 2.87
AL138729.1-201ENST00000406666 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
AL138729.1-201ENST00000406666 SENP3Q9H4L4 574 aaPredicted RBP28■■■□□ 2.07
AL138729.1-201ENST00000406666 PHF23Q9BUL5 403 aaPredicted RBP27.64■■■□□ 2.02
AL138729.1-201ENST00000406666 FOXD1Q16676 465 aa26.31■■□□□ 1.8
AL138729.1-201ENST00000406666 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
AL138729.1-201ENST00000406666 POTEDQ86YR6 584 aa25.07■■□□□ 1.6
AL138729.1-201ENST00000406666 MSH5O43196 834 aa24.64■■□□□ 1.54
AL138729.1-201ENST00000406666 PIAS4Q8N2W9 510 aaPredicted RBP24.37■■□□□ 1.49
AL138729.1-201ENST00000406666 PPP6R1Q9UPN7 881 aa24.27■■□□□ 1.48
AL138729.1-201ENST00000406666 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
AL138729.1-201ENST00000406666 ADRA2BP18089 450 aa24.11■■□□□ 1.45
AL138729.1-201ENST00000406666 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
AL138729.1-201ENST00000406666 MAPK8IP2Q13387 824 aaPredicted RBP22.33■■□□□ 1.17
AL138729.1-201ENST00000406666 DMRT2Q9Y5R5 561 aa22.2■■□□□ 1.14
AL138729.1-201ENST00000406666 ABCC9O60706 1549 aa21.95■■□□□ 1.1
AL138729.1-201ENST00000406666 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
AL138729.1-201ENST00000406666 CACNB1Q02641 598 aaPredicted RBP21.48■■□□□ 1.03
AL138729.1-201ENST00000406666 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.02
AL138729.1-201ENST00000406666 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
AL138729.1-201ENST00000406666 NACADO15069 1562 aa21.26■□□□□ 0.99
AL138729.1-201ENST00000406666 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
AL138729.1-201ENST00000406666 DCAF8L1A6NGE4 600 aa21.22■□□□□ 0.99
AL138729.1-201ENST00000406666 PPP4R3CPQ6ZMV5 832 aa21.22■□□□□ 0.99
AL138729.1-201ENST00000406666 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
AL138729.1-201ENST00000406666 RB1CC1Q8TDY2 1594 aa21.2■□□□□ 0.98
AL138729.1-201ENST00000406666 HOXD11P31277 338 aaPredicted RBP21.19■□□□□ 0.98
AL138729.1-201ENST00000406666 RNF39Q9H2S5 420 aa21.09■□□□□ 0.97
AL138729.1-201ENST00000406666 CNKSR2Q8WXI2 1034 aa20.88■□□□□ 0.93
AL138729.1-201ENST00000406666 RNF216Q9NWF9 866 aaPredicted RBP20.84■□□□□ 0.93
AL138729.1-201ENST00000406666 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
AL138729.1-201ENST00000406666 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
AL138729.1-201ENST00000406666 C1QBPQ07021 282 aaKnown RBP20.65■□□□□ 0.9
AL138729.1-201ENST00000406666 BICRAQ9NZM4 1560 aa20.6■□□□□ 0.89
AL138729.1-201ENST00000406666 PABPN1Q86U42 306 aaKnown RBP eCLIP20.6■□□□□ 0.89
AL138729.1-201ENST00000406666 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
AL138729.1-201ENST00000406666 DNAJC5BQ9UF47 199 aa20.46■□□□□ 0.87
AL138729.1-201ENST00000406666 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
AL138729.1-201ENST00000406666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
AL138729.1-201ENST00000406666 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.8
AL138729.1-201ENST00000406666 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
AL138729.1-201ENST00000406666 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
AL138729.1-201ENST00000406666 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
AL138729.1-201ENST00000406666 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
AL138729.1-201ENST00000406666 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
AL138729.1-201ENST00000406666 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
AL138729.1-201ENST00000406666 U3KPZ7 1027 aaPredicted RBP19.75■□□□□ 0.75
AL138729.1-201ENST00000406666 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
AL138729.1-201ENST00000406666 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
AL138729.1-201ENST00000406666 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
AL138729.1-201ENST00000406666 PEG3Q9GZU2 1588 aa19.65■□□□□ 0.74
AL138729.1-201ENST00000406666 WIZO95785 1651 aa19.65■□□□□ 0.74
AL138729.1-201ENST00000406666 SPINK5Q9NQ38 1064 aaPredicted RBP19.63■□□□□ 0.73
AL138729.1-201ENST00000406666 NCAPD3P42695 1498 aa19.62■□□□□ 0.73
AL138729.1-201ENST00000406666 DSG3P32926 999 aa19.59■□□□□ 0.73
AL138729.1-201ENST00000406666 HMGXB3Q12766 1538 aa19.52■□□□□ 0.72
AL138729.1-201ENST00000406666 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
AL138729.1-201ENST00000406666 POTEHQ6S545 545 aa19.49■□□□□ 0.71
AL138729.1-201ENST00000406666 CAPN15O75808 1086 aa19.48■□□□□ 0.71
AL138729.1-201ENST00000406666 SUPT5HO00267 1087 aaKnown RBP19.46■□□□□ 0.71
AL138729.1-201ENST00000406666 TOP2AP11388 1531 aaKnown RBP19.4■□□□□ 0.7
AL138729.1-201ENST00000406666 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
AL138729.1-201ENST00000406666 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
AL138729.1-201ENST00000406666 KCNA4P22459 653 aa19.2■□□□□ 0.66
AL138729.1-201ENST00000406666 NESP48681 1621 aa19.1■□□□□ 0.65
AL138729.1-201ENST00000406666 ABCB7O75027 752 aa19.08■□□□□ 0.64
AL138729.1-201ENST00000406666 CADPSQ9ULU8 1353 aa19.07■□□□□ 0.64
AL138729.1-201ENST00000406666 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
AL138729.1-201ENST00000406666 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
AL138729.1-201ENST00000406666 CFTRP13569 1480 aa19.02■□□□□ 0.63
AL138729.1-201ENST00000406666 ZNF219Q9P2Y4 722 aaPredicted RBP18.95■□□□□ 0.62
AL138729.1-201ENST00000406666 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
AL138729.1-201ENST00000406666 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
AL138729.1-201ENST00000406666 KIF21AQ7Z4S6 1674 aa18.87■□□□□ 0.61
AL138729.1-201ENST00000406666 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
AL138729.1-201ENST00000406666 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
AL138729.1-201ENST00000406666 APLP2Q06481 763 aa18.84■□□□□ 0.61
AL138729.1-201ENST00000406666 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
AL138729.1-201ENST00000406666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
AL138729.1-201ENST00000406666 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
AL138729.1-201ENST00000406666 SAMD1Q6SPF0 538 aaPredicted RBP18.7■□□□□ 0.58
AL138729.1-201ENST00000406666 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
AL138729.1-201ENST00000406666 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
AL138729.1-201ENST00000406666 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
AL138729.1-201ENST00000406666 WDR62O43379 1518 aa18.62■□□□□ 0.57
AL138729.1-201ENST00000406666 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
AL138729.1-201ENST00000406666 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
AL138729.1-201ENST00000406666 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
AL138729.1-201ENST00000406666 CUX1P39880 1505 aa18.58■□□□□ 0.56
AL138729.1-201ENST00000406666 CUX2O14529 1486 aa18.54■□□□□ 0.56
AL138729.1-201ENST00000406666 WRNQ14191 1432 aaPredicted RBP eCLIP18.54■□□□□ 0.56
AL138729.1-201ENST00000406666 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.56
AL138729.1-201ENST00000406666 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
AL138729.1-201ENST00000406666 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
AL138729.1-201ENST00000406666 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
AL138729.1-201ENST00000406666 POLA2Q14181 598 aa18.46■□□□□ 0.55
AL138729.1-201ENST00000406666 POLA1P09884 1462 aaPredicted RBP18.45■□□□□ 0.54
AL138729.1-201ENST00000406666 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
AL138729.1-201ENST00000406666 CHRDL2Q6WN34 429 aa18.44■□□□□ 0.54
AL138729.1-201ENST00000406666 MYCNP04198 464 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms