RNA–Protein interactions for RNA: ENST00000404699.6

ISX-202, Transcript of intestine specific homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ISX, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ISX-202ENST00000404699 NISCHQ9Y2I1 1504 aa19.69■□□□□ 0.74
ISX-202ENST00000404699 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
ISX-202ENST00000404699 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
ISX-202ENST00000404699 CCDC180Q9P1Z9 1646 aa16.69■□□□□ 0.26
ISX-202ENST00000404699 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
ISX-202ENST00000404699 ZCCHC6Q5VYS8 1495 aaKnown RBP16.66■□□□□ 0.26
ISX-202ENST00000404699 ABCC9O60706 1549 aa16.51■□□□□ 0.23
ISX-202ENST00000404699 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
ISX-202ENST00000404699 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
ISX-202ENST00000404699 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
ISX-202ENST00000404699 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
ISX-202ENST00000404699 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
ISX-202ENST00000404699 PCGF6Q9BYE7 350 aa15.73■□□□□ 0.11
ISX-202ENST00000404699 NACADO15069 1562 aa15.73■□□□□ 0.11
ISX-202ENST00000404699 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.11
ISX-202ENST00000404699 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
ISX-202ENST00000404699 HRCP23327 699 aa15.69■□□□□ 0.1
ISX-202ENST00000404699 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
ISX-202ENST00000404699 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
ISX-202ENST00000404699 PPARGC1BQ86YN6 1023 aaKnown RBP15.44■□□□□ 0.06
ISX-202ENST00000404699 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
ISX-202ENST00000404699 CECR2Q9BXF3 1484 aa15.41■□□□□ 0.06
ISX-202ENST00000404699 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
ISX-202ENST00000404699 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
ISX-202ENST00000404699 MROH2BQ7Z745 1585 aa15.34■□□□□ 0.05
ISX-202ENST00000404699 WIZO95785 1651 aa15.27■□□□□ 0.03
ISX-202ENST00000404699 UNC13AQ9UPW8 1703 aa15.21■□□□□ 0.03
ISX-202ENST00000404699 BICRAQ9NZM4 1560 aa15.16■□□□□ 0.02
ISX-202ENST00000404699 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
ISX-202ENST00000404699 ZEB1P37275 1124 aaPredicted RBP15.02■□□□□ -0
ISX-202ENST00000404699 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
ISX-202ENST00000404699 SMARCA4P51532 1647 aa15□□□□□ -0.01
ISX-202ENST00000404699 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
ISX-202ENST00000404699 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
ISX-202ENST00000404699 CCDC88BA6NC98 1476 aa14.96□□□□□ -0.01
ISX-202ENST00000404699 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
ISX-202ENST00000404699 TTBK1Q5TCY1 1321 aaPredicted RBP14.87□□□□□ -0.03
ISX-202ENST00000404699 SOGA1O94964 1423 aa14.83□□□□□ -0.04
ISX-202ENST00000404699 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.04
ISX-202ENST00000404699 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
ISX-202ENST00000404699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
ISX-202ENST00000404699 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
ISX-202ENST00000404699 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.04
ISX-202ENST00000404699 UBTFP17480 764 aaKnown RBP14.77□□□□□ -0.05
ISX-202ENST00000404699 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
ISX-202ENST00000404699 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
ISX-202ENST00000404699 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
ISX-202ENST00000404699 TNIKQ9UKE5 1360 aa14.71□□□□□ -0.05
ISX-202ENST00000404699 WRNQ14191 1432 aaPredicted RBP eCLIP14.7□□□□□ -0.06
ISX-202ENST00000404699 EEA1Q15075 1411 aa14.7□□□□□ -0.06
ISX-202ENST00000404699 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
ISX-202ENST00000404699 GOLGA3Q08378 1498 aa14.65□□□□□ -0.06
ISX-202ENST00000404699 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
ISX-202ENST00000404699 SYNJ1O43426 1573 aa14.61□□□□□ -0.07
ISX-202ENST00000404699 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
ISX-202ENST00000404699 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
ISX-202ENST00000404699 RANGAP1P46060 587 aaPredicted RBP14.55□□□□□ -0.08
ISX-202ENST00000404699 CLIP1P30622 1438 aa14.51□□□□□ -0.09
ISX-202ENST00000404699 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
ISX-202ENST00000404699 KIF21BO75037 1637 aa14.5□□□□□ -0.09
ISX-202ENST00000404699 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
ISX-202ENST00000404699 DIEXFQ68CQ4 756 aaKnown RBP14.47□□□□□ -0.09
ISX-202ENST00000404699 RAPGEF2Q9Y4G8 1499 aa14.46□□□□□ -0.09
ISX-202ENST00000404699 HMGXB3Q12766 1538 aa14.46□□□□□ -0.09
ISX-202ENST00000404699 APLP2Q06481 763 aa14.44□□□□□ -0.1
ISX-202ENST00000404699 VPS8Q8N3P4 1428 aa14.42□□□□□ -0.1
ISX-202ENST00000404699 NESP48681 1621 aa14.41□□□□□ -0.1
ISX-202ENST00000404699 TOP2BQ02880 1626 aa14.4□□□□□ -0.1
ISX-202ENST00000404699 CADPSQ9ULU8 1353 aa14.39□□□□□ -0.11
ISX-202ENST00000404699 ACIN1Q9UKV3 1341 aaKnown RBP14.34□□□□□ -0.11
ISX-202ENST00000404699 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
ISX-202ENST00000404699 ZNF316A6NFI3 1004 aaPredicted RBP14.33□□□□□ -0.11
ISX-202ENST00000404699 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
ISX-202ENST00000404699 CFTRP13569 1480 aa14.3□□□□□ -0.12
ISX-202ENST00000404699 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
ISX-202ENST00000404699 CUX1P39880 1505 aa14.28□□□□□ -0.12
ISX-202ENST00000404699 PRXQ9BXM0 1461 aa14.26□□□□□ -0.13
ISX-202ENST00000404699 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
ISX-202ENST00000404699 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
ISX-202ENST00000404699 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
ISX-202ENST00000404699 KIF27Q86VH2 1401 aa14.23□□□□□ -0.13
ISX-202ENST00000404699 YTHDC1Q96MU7 727 aaKnown RBP14.21□□□□□ -0.13
ISX-202ENST00000404699 GTF3C3Q9Y5Q9 886 aa14.21□□□□□ -0.13
ISX-202ENST00000404699 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
ISX-202ENST00000404699 ERCC6Q03468 1493 aa14.19□□□□□ -0.14
ISX-202ENST00000404699 PDS5BQ9NTI5 1447 aa14.18□□□□□ -0.14
ISX-202ENST00000404699 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
ISX-202ENST00000404699 MIER1Q8N108 512 aa14.16□□□□□ -0.14
ISX-202ENST00000404699 CUX2O14529 1486 aa14.12□□□□□ -0.15
ISX-202ENST00000404699 ITGAEP38570 1179 aa14.11□□□□□ -0.15
ISX-202ENST00000404699 ARHGAP35Q9NRY4 1499 aa14.11□□□□□ -0.15
ISX-202ENST00000404699 DHX57Q6P158 1386 aaKnown RBP14.1□□□□□ -0.15
ISX-202ENST00000404699 RAD54L2Q9Y4B4 1467 aa14.1□□□□□ -0.15
ISX-202ENST00000404699 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
ISX-202ENST00000404699 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.15
ISX-202ENST00000404699 IGF1RP08069 1367 aa14.06□□□□□ -0.16
ISX-202ENST00000404699 LAMC3Q9Y6N6 1575 aa14.06□□□□□ -0.16
ISX-202ENST00000404699 FBLN2P98095 1184 aa14.06□□□□□ -0.16
ISX-202ENST00000404699 RRBP1Q9P2E9 1410 aaKnown RBP14.06□□□□□ -0.16
ISX-202ENST00000404699 CCNB3Q8WWL7 1395 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms