RNA–Protein interactions for RNA: ENST00000396645.6

HMGN2P46-203, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 1 (best)

Gene HMGN2P46, Length 1,284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-203ENST00000396645 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
HMGN2P46-203ENST00000396645 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
HMGN2P46-203ENST00000396645 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
HMGN2P46-203ENST00000396645 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
HMGN2P46-203ENST00000396645 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
HMGN2P46-203ENST00000396645 FOXD1Q16676 465 aa18.76■□□□□ 0.59
HMGN2P46-203ENST00000396645 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
HMGN2P46-203ENST00000396645 MSH5O43196 834 aa17.81■□□□□ 0.44
HMGN2P46-203ENST00000396645 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
HMGN2P46-203ENST00000396645 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
HMGN2P46-203ENST00000396645 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
HMGN2P46-203ENST00000396645 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
HMGN2P46-203ENST00000396645 ADRA2BP18089 450 aa16.83■□□□□ 0.28
HMGN2P46-203ENST00000396645 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.16
HMGN2P46-203ENST00000396645 ABCC9O60706 1549 aa16■□□□□ 0.15
HMGN2P46-203ENST00000396645 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
HMGN2P46-203ENST00000396645 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
HMGN2P46-203ENST00000396645 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
HMGN2P46-203ENST00000396645 NACADO15069 1562 aa15.79■□□□□ 0.12
HMGN2P46-203ENST00000396645 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
HMGN2P46-203ENST00000396645 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
HMGN2P46-203ENST00000396645 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
HMGN2P46-203ENST00000396645 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
HMGN2P46-203ENST00000396645 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
HMGN2P46-203ENST00000396645 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
HMGN2P46-203ENST00000396645 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
HMGN2P46-203ENST00000396645 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
HMGN2P46-203ENST00000396645 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
HMGN2P46-203ENST00000396645 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
HMGN2P46-203ENST00000396645 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
HMGN2P46-203ENST00000396645 BICRAQ9NZM4 1560 aa15.08■□□□□ 0
HMGN2P46-203ENST00000396645 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
HMGN2P46-203ENST00000396645 KCNA4P22459 653 aa14.97□□□□□ -0.01
HMGN2P46-203ENST00000396645 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
HMGN2P46-203ENST00000396645 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
HMGN2P46-203ENST00000396645 C1QBPQ07021 282 aaKnown RBP14.85□□□□□ -0.03
HMGN2P46-203ENST00000396645 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
HMGN2P46-203ENST00000396645 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
HMGN2P46-203ENST00000396645 SUPT5HO00267 1087 aaKnown RBP14.79□□□□□ -0.04
HMGN2P46-203ENST00000396645 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
HMGN2P46-203ENST00000396645 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
HMGN2P46-203ENST00000396645 EIF4G1Q04637 1599 aaKnown RBP14.7□□□□□ -0.06
HMGN2P46-203ENST00000396645 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
HMGN2P46-203ENST00000396645 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
HMGN2P46-203ENST00000396645 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
HMGN2P46-203ENST00000396645 WIZO95785 1651 aa14.65□□□□□ -0.06
HMGN2P46-203ENST00000396645 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
HMGN2P46-203ENST00000396645 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
HMGN2P46-203ENST00000396645 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
HMGN2P46-203ENST00000396645 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
HMGN2P46-203ENST00000396645 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
HMGN2P46-203ENST00000396645 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
HMGN2P46-203ENST00000396645 CC2D2AQ9P2K1 1620 aa14.52□□□□□ -0.08
HMGN2P46-203ENST00000396645 HMGXB3Q12766 1538 aa14.52□□□□□ -0.08
HMGN2P46-203ENST00000396645 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
HMGN2P46-203ENST00000396645 POTEHQ6S545 545 aa14.51□□□□□ -0.09
HMGN2P46-203ENST00000396645 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
HMGN2P46-203ENST00000396645 CCDC88BA6NC98 1476 aa14.34□□□□□ -0.11
HMGN2P46-203ENST00000396645 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
HMGN2P46-203ENST00000396645 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
HMGN2P46-203ENST00000396645 CFTRP13569 1480 aa14.12□□□□□ -0.15
HMGN2P46-203ENST00000396645 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
HMGN2P46-203ENST00000396645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
HMGN2P46-203ENST00000396645 LAMC3Q9Y6N6 1575 aa14.11□□□□□ -0.15
HMGN2P46-203ENST00000396645 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
HMGN2P46-203ENST00000396645 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
HMGN2P46-203ENST00000396645 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
HMGN2P46-203ENST00000396645 WRNQ14191 1432 aaPredicted RBP eCLIP13.97□□□□□ -0.17
HMGN2P46-203ENST00000396645 FANCD2Q9BXW9 1451 aa13.96□□□□□ -0.17
HMGN2P46-203ENST00000396645 NESP48681 1621 aa13.95□□□□□ -0.18
HMGN2P46-203ENST00000396645 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
HMGN2P46-203ENST00000396645 DSG3P32926 999 aa13.93□□□□□ -0.18
HMGN2P46-203ENST00000396645 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
HMGN2P46-203ENST00000396645 TOP2BQ02880 1626 aa13.9□□□□□ -0.19
HMGN2P46-203ENST00000396645 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.19
HMGN2P46-203ENST00000396645 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
HMGN2P46-203ENST00000396645 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
HMGN2P46-203ENST00000396645 DNMBPQ6XZF7 1577 aa13.84□□□□□ -0.19
HMGN2P46-203ENST00000396645 ERCC6Q03468 1493 aa13.84□□□□□ -0.19
HMGN2P46-203ENST00000396645 CUX1P39880 1505 aa13.82□□□□□ -0.2
HMGN2P46-203ENST00000396645 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
HMGN2P46-203ENST00000396645 ZBTB22O15209 634 aa13.8□□□□□ -0.2
HMGN2P46-203ENST00000396645 CAPN15O75808 1086 aa13.8□□□□□ -0.2
HMGN2P46-203ENST00000396645 MRC2Q9UBG0 1479 aa13.8□□□□□ -0.2
HMGN2P46-203ENST00000396645 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
HMGN2P46-203ENST00000396645 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
HMGN2P46-203ENST00000396645 EEA1Q15075 1411 aa13.78□□□□□ -0.2
HMGN2P46-203ENST00000396645 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
HMGN2P46-203ENST00000396645 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
HMGN2P46-203ENST00000396645 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
HMGN2P46-203ENST00000396645 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
HMGN2P46-203ENST00000396645 WDR62O43379 1518 aa13.71□□□□□ -0.21
HMGN2P46-203ENST00000396645 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
HMGN2P46-203ENST00000396645 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
HMGN2P46-203ENST00000396645 SOGA1O94964 1423 aa13.67□□□□□ -0.22
HMGN2P46-203ENST00000396645 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
HMGN2P46-203ENST00000396645 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
HMGN2P46-203ENST00000396645 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
HMGN2P46-203ENST00000396645 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
HMGN2P46-203ENST00000396645 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms