RNA–Protein interactions for RNA: ENST00000394711.1

CLCA1-202, Transcript of chloride channel accessory 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCA1, Length 3,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1-202ENST00000394711 NISCHQ9Y2I1 1504 aa12.29□□□□□ -0.44
CLCA1-202ENST00000394711 CHIC1Q5VXU3 224 aa12.26□□□□□ -0.45
CLCA1-202ENST00000394711 AEBP2Q6ZN18 517 aaPredicted RBP12.05□□□□□ -0.48
CLCA1-202ENST00000394711 CCDC180Q9P1Z9 1646 aa11.17□□□□□ -0.62
CLCA1-202ENST00000394711 ABCC9O60706 1549 aa11.1□□□□□ -0.63
CLCA1-202ENST00000394711 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
CLCA1-202ENST00000394711 SLC24A1O60721 1099 aa10.84□□□□□ -0.67
CLCA1-202ENST00000394711 RB1CC1Q8TDY2 1594 aa10.68□□□□□ -0.7
CLCA1-202ENST00000394711 NACADO15069 1562 aa10.6□□□□□ -0.71
CLCA1-202ENST00000394711 MYO15BQ96JP2 1530 aa10.48□□□□□ -0.73
CLCA1-202ENST00000394711 DNAJC5BQ9UF47 199 aa10.4□□□□□ -0.74
CLCA1-202ENST00000394711 DCAF8L2P0C7V8 631 aa10.37□□□□□ -0.75
CLCA1-202ENST00000394711 SHROOM4Q9ULL8 1493 aa10.34□□□□□ -0.75
CLCA1-202ENST00000394711 EHMT2Q96KQ7 1210 aa10.32□□□□□ -0.76
CLCA1-202ENST00000394711 PABPN1Q86U42 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLCA1-202ENST00000394711 DCAF1Q9Y4B6 1507 aa10.26□□□□□ -0.77
CLCA1-202ENST00000394711 UNC13AQ9UPW8 1703 aa10.25□□□□□ -0.77
CLCA1-202ENST00000394711 PLPPR3Q6T4P5 718 aa10.24□□□□□ -0.77
CLCA1-202ENST00000394711 BICRAQ9NZM4 1560 aa10.21□□□□□ -0.78
CLCA1-202ENST00000394711 ZCCHC6Q5VYS8 1495 aaKnown RBP10.15□□□□□ -0.78
CLCA1-202ENST00000394711 CECR2Q9BXF3 1484 aa10.08□□□□□ -0.8
CLCA1-202ENST00000394711 CC2D2AQ9P2K1 1620 aa10.05□□□□□ -0.8
CLCA1-202ENST00000394711 EIF4G1Q04637 1599 aaKnown RBP10.03□□□□□ -0.8
CLCA1-202ENST00000394711 SCRIBQ14160 1630 aa9.99□□□□□ -0.81
CLCA1-202ENST00000394711 KCNA4P22459 653 aa9.96□□□□□ -0.82
CLCA1-202ENST00000394711 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.82
CLCA1-202ENST00000394711 ADRA2BP18089 450 aa9.87□□□□□ -0.83
CLCA1-202ENST00000394711 SENP3Q9H4L4 574 aaPredicted RBP9.85□□□□□ -0.83
CLCA1-202ENST00000394711 DNAJC5Q9H3Z4 198 aa9.83□□□□□ -0.84
CLCA1-202ENST00000394711 CUX2O14529 1486 aa9.79□□□□□ -0.84
CLCA1-202ENST00000394711 NCAPD3P42695 1498 aa9.75□□□□□ -0.85
CLCA1-202ENST00000394711 SMARCA2P51531 1590 aa9.7□□□□□ -0.86
CLCA1-202ENST00000394711 ERCC6Q03468 1493 aa9.7□□□□□ -0.86
CLCA1-202ENST00000394711 CSRNP3Q8WYN3 585 aa9.7□□□□□ -0.86
CLCA1-202ENST00000394711 DAXXQ9UER7 740 aaPredicted RBP9.69□□□□□ -0.86
CLCA1-202ENST00000394711 HMGXB3Q12766 1538 aa9.67□□□□□ -0.86
CLCA1-202ENST00000394711 ATAD2BQ9ULI0 1458 aa9.64□□□□□ -0.87
CLCA1-202ENST00000394711 BAZ1AQ9NRL2 1556 aaPredicted RBP9.61□□□□□ -0.87
CLCA1-202ENST00000394711 SMARCA4P51532 1647 aa9.6□□□□□ -0.87
CLCA1-202ENST00000394711 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
CLCA1-202ENST00000394711 PPP6R1Q9UPN7 881 aa9.58□□□□□ -0.88
CLCA1-202ENST00000394711 BAZ1BQ9UIG0 1483 aaKnown RBP9.58□□□□□ -0.88
CLCA1-202ENST00000394711 LAMC3Q9Y6N6 1575 aa9.57□□□□□ -0.88
CLCA1-202ENST00000394711 PEG3Q9GZU2 1588 aa9.56□□□□□ -0.88
CLCA1-202ENST00000394711 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
CLCA1-202ENST00000394711 PDS5BQ9NTI5 1447 aa9.55□□□□□ -0.88
CLCA1-202ENST00000394711 SLC4A1APQ9BWU0 796 aaKnown RBP9.49□□□□□ -0.89
CLCA1-202ENST00000394711 AMER1Q5JTC6 1135 aaPredicted RBP9.46□□□□□ -0.89
CLCA1-202ENST00000394711 THOC2Q8NI27 1593 aaKnown RBP9.45□□□□□ -0.9
CLCA1-202ENST00000394711 NESP48681 1621 aa9.44□□□□□ -0.9
CLCA1-202ENST00000394711 CADPSQ9ULU8 1353 aa9.44□□□□□ -0.9
CLCA1-202ENST00000394711 MRC2Q9UBG0 1479 aa9.41□□□□□ -0.9
CLCA1-202ENST00000394711 MROH2BQ7Z745 1585 aa9.38□□□□□ -0.91
CLCA1-202ENST00000394711 KIF21AQ7Z4S6 1674 aa9.36□□□□□ -0.91
CLCA1-202ENST00000394711 WDR62O43379 1518 aa9.36□□□□□ -0.91
CLCA1-202ENST00000394711 CEP164Q9UPV0 1460 aa9.35□□□□□ -0.91
CLCA1-202ENST00000394711 OSCARQ8IYS5 282 aa9.31□□□□□ -0.92
CLCA1-202ENST00000394711 FANCD2Q9BXW9 1451 aa9.29□□□□□ -0.92
CLCA1-202ENST00000394711 CFTRP13569 1480 aa9.28□□□□□ -0.92
CLCA1-202ENST00000394711 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.93
CLCA1-202ENST00000394711 TRIM41Q8WV44 630 aa9.27□□□□□ -0.93
CLCA1-202ENST00000394711 ABCC8Q09428 1581 aa9.25□□□□□ -0.93
CLCA1-202ENST00000394711 WIZO95785 1651 aa9.25□□□□□ -0.93
CLCA1-202ENST00000394711 TOP2AP11388 1531 aaKnown RBP9.24□□□□□ -0.93
CLCA1-202ENST00000394711 ZBTB22O15209 634 aa9.24□□□□□ -0.93
CLCA1-202ENST00000394711 FOXD1Q16676 465 aa9.24□□□□□ -0.93
CLCA1-202ENST00000394711 IFT140Q96RY7 1462 aa9.2□□□□□ -0.94
CLCA1-202ENST00000394711 PRDM2Q13029 1718 aa9.2□□□□□ -0.94
CLCA1-202ENST00000394711 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
CLCA1-202ENST00000394711 RSF1Q96T23 1441 aaPredicted RBP9.19□□□□□ -0.94
CLCA1-202ENST00000394711 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.94
CLCA1-202ENST00000394711 APLP2Q06481 763 aa9.14□□□□□ -0.95
CLCA1-202ENST00000394711 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
CLCA1-202ENST00000394711 ARXQ96QS3 562 aa9.11□□□□□ -0.95
CLCA1-202ENST00000394711 WDR97A6NE52 1622 aa9.09□□□□□ -0.95
CLCA1-202ENST00000394711 TAOK2Q9UL54 1235 aa9.09□□□□□ -0.95
CLCA1-202ENST00000394711 DNMBPQ6XZF7 1577 aa9.09□□□□□ -0.95
CLCA1-202ENST00000394711 TOPBP1Q92547 1522 aa9.09□□□□□ -0.95
CLCA1-202ENST00000394711 NPM3O75607 178 aaKnown RBP9.08□□□□□ -0.96
CLCA1-202ENST00000394711 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
CLCA1-202ENST00000394711 RIMBP3CA6NJZ7 1639 aa9.07□□□□□ -0.96
CLCA1-202ENST00000394711 RIMBP3BA6NNM3 1639 aa9.07□□□□□ -0.96
CLCA1-202ENST00000394711 RIMBP3Q9UFD9 1639 aa9.07□□□□□ -0.96
CLCA1-202ENST00000394711 ARHGEF11O15085 1522 aa9.05□□□□□ -0.96
CLCA1-202ENST00000394711 EIF4G3O43432 1585 aaKnown RBP9.02□□□□□ -0.97
CLCA1-202ENST00000394711 ZNF608Q9ULD9 1512 aaPredicted RBP9.02□□□□□ -0.97
CLCA1-202ENST00000394711 TARBP1Q13395 1621 aaKnown RBP8.99□□□□□ -0.97
CLCA1-202ENST00000394711 TPRNQ4KMQ1 711 aa8.99□□□□□ -0.97
CLCA1-202ENST00000394711 CYB5RLQ6IPT4 315 aa8.99□□□□□ -0.97
CLCA1-202ENST00000394711 SOGA1O94964 1423 aa8.99□□□□□ -0.97
CLCA1-202ENST00000394711 PELP1Q8IZL8 1130 aaKnown RBP8.98□□□□□ -0.97
CLCA1-202ENST00000394711 MAGI1Q96QZ7 1491 aaPredicted RBP8.98□□□□□ -0.97
CLCA1-202ENST00000394711 SYNJ1O43426 1573 aa8.97□□□□□ -0.97
CLCA1-202ENST00000394711 POLA1P09884 1462 aaPredicted RBP8.97□□□□□ -0.97
CLCA1-202ENST00000394711 TRHP20396 242 aaPredicted RBP8.97□□□□□ -0.97
CLCA1-202ENST00000394711 FBLN2P98095 1184 aa8.97□□□□□ -0.97
CLCA1-202ENST00000394711 ERICH6Q7L0X2 663 aa8.96□□□□□ -0.97
CLCA1-202ENST00000394711 CHMP7Q8WUX9 453 aaPredicted RBP8.96□□□□□ -0.97
CLCA1-202ENST00000394711 CHD1O14646 1710 aa8.96□□□□□ -0.98
CLCA1-202ENST00000394711 TTBK1Q5TCY1 1321 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms