RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 POTEDQ86YR6 584 aa9.15□□□□□ -0.95
CCDC110-202ENST00000393540 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
CCDC110-202ENST00000393540 ILDR1Q86SU0 546 aaPredicted RBP8.58□□□□□ -1.04
CCDC110-202ENST00000393540 NISCHQ9Y2I1 1504 aa8.52□□□□□ -1.05
CCDC110-202ENST00000393540 IGSF5Q9NSI5 407 aa8.14□□□□□ -1.11
CCDC110-202ENST00000393540 PCDH10Q9P2E7 1040 aa7.66□□□□□ -1.18
CCDC110-202ENST00000393540 SOCS7O14512 581 aa7.5□□□□□ -1.21
CCDC110-202ENST00000393540 AEBP2Q6ZN18 517 aaPredicted RBP7.43□□□□□ -1.22
CCDC110-202ENST00000393540 CCDC180Q9P1Z9 1646 aa7.37□□□□□ -1.23
CCDC110-202ENST00000393540 ABCC9O60706 1549 aa7.24□□□□□ -1.25
CCDC110-202ENST00000393540 CHIC1Q5VXU3 224 aa7.23□□□□□ -1.25
CCDC110-202ENST00000393540 ZCCHC6Q5VYS8 1495 aaKnown RBP7.18□□□□□ -1.26
CCDC110-202ENST00000393540 RBAK-RBAKDNI3L0D1 243 aa7.14□□□□□ -1.27
CCDC110-202ENST00000393540 IFFO2Q5TF58 517 aa7.08□□□□□ -1.28
CCDC110-202ENST00000393540 LMTK3Q96Q04 1460 aa7.04□□□□□ -1.28
CCDC110-202ENST00000393540 DNAJC5BQ9UF47 199 aa7.04□□□□□ -1.28
CCDC110-202ENST00000393540 DCAF1Q9Y4B6 1507 aa7.03□□□□□ -1.28
CCDC110-202ENST00000393540 SLC34A2O95436 690 aa7□□□□□ -1.29
CCDC110-202ENST00000393540 SHROOM4Q9ULL8 1493 aa7□□□□□ -1.29
CCDC110-202ENST00000393540 DCAF8L2P0C7V8 631 aa6.92□□□□□ -1.3
CCDC110-202ENST00000393540 MYO15BQ96JP2 1530 aa6.9□□□□□ -1.3
CCDC110-202ENST00000393540 TRIM41Q8WV44 630 aa6.87□□□□□ -1.31
CCDC110-202ENST00000393540 NACADO15069 1562 aa6.83□□□□□ -1.32
CCDC110-202ENST00000393540 PABPN1Q86U42 306 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCDC110-202ENST00000393540 SENP3Q9H4L4 574 aaPredicted RBP6.81□□□□□ -1.32
CCDC110-202ENST00000393540 SCRIBQ14160 1630 aa6.81□□□□□ -1.32
CCDC110-202ENST00000393540 POTEHQ6S545 545 aa6.81□□□□□ -1.32
CCDC110-202ENST00000393540 SUPT5HO00267 1087 aaKnown RBP6.74□□□□□ -1.33
CCDC110-202ENST00000393540 RB1CC1Q8TDY2 1594 aa6.74□□□□□ -1.33
CCDC110-202ENST00000393540 ERCC6L2Q5T890 1561 aa6.73□□□□□ -1.33
CCDC110-202ENST00000393540 UNC13AQ9UPW8 1703 aa6.72□□□□□ -1.33
CCDC110-202ENST00000393540 CECR2Q9BXF3 1484 aa6.65□□□□□ -1.34
CCDC110-202ENST00000393540 RSF1Q96T23 1441 aaPredicted RBP6.65□□□□□ -1.34
CCDC110-202ENST00000393540 BICRAQ9NZM4 1560 aa6.63□□□□□ -1.35
CCDC110-202ENST00000393540 MROH2BQ7Z745 1585 aa6.61□□□□□ -1.35
CCDC110-202ENST00000393540 MSH5O43196 834 aa6.61□□□□□ -1.35
CCDC110-202ENST00000393540 WIZO95785 1651 aa6.57□□□□□ -1.36
CCDC110-202ENST00000393540 FBXO41Q8TF61 875 aa6.56□□□□□ -1.36
CCDC110-202ENST00000393540 SMARCA4P51532 1647 aa6.53□□□□□ -1.36
CCDC110-202ENST00000393540 BAZ1AQ9NRL2 1556 aaPredicted RBP6.53□□□□□ -1.36
CCDC110-202ENST00000393540 PLSCR2Q9NRY7 297 aa6.5□□□□□ -1.37
CCDC110-202ENST00000393540 TOP2AP11388 1531 aaKnown RBP6.46□□□□□ -1.37
CCDC110-202ENST00000393540 EIF4G1Q04637 1599 aaKnown RBP6.46□□□□□ -1.38
CCDC110-202ENST00000393540 PEG3Q9GZU2 1588 aa6.45□□□□□ -1.38
CCDC110-202ENST00000393540 CC2D2AQ9P2K1 1620 aa6.44□□□□□ -1.38
CCDC110-202ENST00000393540 SMARCA2P51531 1590 aa6.43□□□□□ -1.38
CCDC110-202ENST00000393540 CCDC88BA6NC98 1476 aa6.42□□□□□ -1.38
CCDC110-202ENST00000393540 PHF23Q9BUL5 403 aaPredicted RBP6.41□□□□□ -1.38
CCDC110-202ENST00000393540 ATAD2BQ9ULI0 1458 aa6.4□□□□□ -1.39
CCDC110-202ENST00000393540 BAZ1BQ9UIG0 1483 aaKnown RBP6.33□□□□□ -1.4
CCDC110-202ENST00000393540 ABCC8Q09428 1581 aa6.32□□□□□ -1.4
CCDC110-202ENST00000393540 NCAPD3P42695 1498 aa6.32□□□□□ -1.4
CCDC110-202ENST00000393540 LOC105371045A0A1W2PR82 267 aa6.32□□□□□ -1.4
CCDC110-202ENST00000393540 CACNB1Q02641 598 aaPredicted RBP6.32□□□□□ -1.4
CCDC110-202ENST00000393540 HMGXB3Q12766 1538 aa6.31□□□□□ -1.4
CCDC110-202ENST00000393540 FOXD1Q16676 465 aa6.31□□□□□ -1.4
CCDC110-202ENST00000393540 SPATA31D1Q6ZQQ2 1576 aa6.3□□□□□ -1.4
CCDC110-202ENST00000393540 SYNJ1O43426 1573 aa6.25□□□□□ -1.41
CCDC110-202ENST00000393540 CUX2O14529 1486 aa6.24□□□□□ -1.41
CCDC110-202ENST00000393540 FAM9AQ8IZU1 332 aaPredicted RBP6.22□□□□□ -1.41
CCDC110-202ENST00000393540 RUSC2Q8N2Y8 1516 aa6.22□□□□□ -1.41
CCDC110-202ENST00000393540 SOGA1O94964 1423 aa6.22□□□□□ -1.41
CCDC110-202ENST00000393540 WRNQ14191 1432 aaPredicted RBP eCLIP6.21□□□□□ -1.41
CCDC110-202ENST00000393540 CFTRP13569 1480 aa6.21□□□□□ -1.42
CCDC110-202ENST00000393540 ERCC6Q03468 1493 aa6.2□□□□□ -1.42
CCDC110-202ENST00000393540 PRDM2Q13029 1718 aa6.2□□□□□ -1.42
CCDC110-202ENST00000393540 NESP48681 1621 aa6.19□□□□□ -1.42
CCDC110-202ENST00000393540 TOP2BQ02880 1626 aa6.19□□□□□ -1.42
CCDC110-202ENST00000393540 BIVM-ERCC5R4GMW8 1640 aa6.19□□□□□ -1.42
CCDC110-202ENST00000393540 CUX1P39880 1505 aa6.17□□□□□ -1.42
CCDC110-202ENST00000393540 CADPSQ9ULU8 1353 aa6.15□□□□□ -1.43
CCDC110-202ENST00000393540 EHMT2Q96KQ7 1210 aa6.14□□□□□ -1.43
CCDC110-202ENST00000393540 EEA1Q15075 1411 aa6.12□□□□□ -1.43
CCDC110-202ENST00000393540 CSRNP3Q8WYN3 585 aa6.12□□□□□ -1.43
CCDC110-202ENST00000393540 KIF21BO75037 1637 aa6.11□□□□□ -1.43
CCDC110-202ENST00000393540 TNIKQ9UKE5 1360 aa6.09□□□□□ -1.43
CCDC110-202ENST00000393540 FANCD2Q9BXW9 1451 aa6.09□□□□□ -1.44
CCDC110-202ENST00000393540 GOLGA3Q08378 1498 aa6.07□□□□□ -1.44
CCDC110-202ENST00000393540 RAPGEF2Q9Y4G8 1499 aa6.07□□□□□ -1.44
CCDC110-202ENST00000393540 ILDR2Q71H61 639 aa6.07□□□□□ -1.44
CCDC110-202ENST00000393540 LAMC3Q9Y6N6 1575 aa6.07□□□□□ -1.44
CCDC110-202ENST00000393540 CEP162Q5TB80 1403 aa6.07□□□□□ -1.44
CCDC110-202ENST00000393540 PRXQ9BXM0 1461 aa6.06□□□□□ -1.44
CCDC110-202ENST00000393540 CEP164Q9UPV0 1460 aa6.06□□□□□ -1.44
CCDC110-202ENST00000393540 FGD5Q6ZNL6 1462 aa6.06□□□□□ -1.44
CCDC110-202ENST00000393540 PCGF6Q9BYE7 350 aa6.05□□□□□ -1.44
CCDC110-202ENST00000393540 DNMBPQ6XZF7 1577 aa6.05□□□□□ -1.44
CCDC110-202ENST00000393540 URB2Q14146 1524 aaKnown RBP6.05□□□□□ -1.44
CCDC110-202ENST00000393540 KIF21AQ7Z4S6 1674 aa6.05□□□□□ -1.44
CCDC110-202ENST00000393540 TOPBP1Q92547 1522 aa6.04□□□□□ -1.44
CCDC110-202ENST00000393540 ERICH3Q5RHP9 1530 aa6.03□□□□□ -1.44
CCDC110-202ENST00000393540 RAD54L2Q9Y4B4 1467 aa6.03□□□□□ -1.44
CCDC110-202ENST00000393540 WDR97A6NE52 1622 aa6.02□□□□□ -1.45
CCDC110-202ENST00000393540 KIF27Q86VH2 1401 aa6.02□□□□□ -1.45
CCDC110-202ENST00000393540 POLA1P09884 1462 aaPredicted RBP6.02□□□□□ -1.45
CCDC110-202ENST00000393540 IGF1RP08069 1367 aa6.02□□□□□ -1.45
CCDC110-202ENST00000393540 TRIM26Q12899 539 aaPredicted RBP6.01□□□□□ -1.45
CCDC110-202ENST00000393540 UBTFP17480 764 aaKnown RBP6.01□□□□□ -1.45
CCDC110-202ENST00000393540 ABCA10Q8WWZ4 1543 aa6□□□□□ -1.45
CCDC110-202ENST00000393540 THOC2Q8NI27 1593 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms