RNA–Protein interactions for RNA: ENST00000393416.6

MDM2-212, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-212ENST00000393416 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
MDM2-212ENST00000393416 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
MDM2-212ENST00000393416 NISCHQ9Y2I1 1504 aa17.88■□□□□ 0.45
MDM2-212ENST00000393416 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
MDM2-212ENST00000393416 ABCC9O60706 1549 aa17.49■□□□□ 0.39
MDM2-212ENST00000393416 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
MDM2-212ENST00000393416 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
MDM2-212ENST00000393416 DNAJC5Q9H3Z4 198 aa16.58■□□□□ 0.24
MDM2-212ENST00000393416 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
MDM2-212ENST00000393416 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
MDM2-212ENST00000393416 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
MDM2-212ENST00000393416 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
MDM2-212ENST00000393416 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
MDM2-212ENST00000393416 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
MDM2-212ENST00000393416 NACADO15069 1562 aa15.8■□□□□ 0.12
MDM2-212ENST00000393416 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
MDM2-212ENST00000393416 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
MDM2-212ENST00000393416 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
MDM2-212ENST00000393416 ADRA2BP18089 450 aa15.65■□□□□ 0.1
MDM2-212ENST00000393416 KCNA4P22459 653 aa15.62■□□□□ 0.09
MDM2-212ENST00000393416 DCAF8L2P0C7V8 631 aa15.48■□□□□ 0.07
MDM2-212ENST00000393416 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
MDM2-212ENST00000393416 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
MDM2-212ENST00000393416 CUX2O14529 1486 aa15.45■□□□□ 0.06
MDM2-212ENST00000393416 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
MDM2-212ENST00000393416 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
MDM2-212ENST00000393416 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
MDM2-212ENST00000393416 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
MDM2-212ENST00000393416 FOXD1Q16676 465 aa15.1■□□□□ 0.01
MDM2-212ENST00000393416 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
MDM2-212ENST00000393416 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
MDM2-212ENST00000393416 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
MDM2-212ENST00000393416 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
MDM2-212ENST00000393416 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
MDM2-212ENST00000393416 NESP48681 1621 aa14.75□□□□□ -0.05
MDM2-212ENST00000393416 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
MDM2-212ENST00000393416 SMARCA2P51531 1590 aa14.63□□□□□ -0.07
MDM2-212ENST00000393416 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
MDM2-212ENST00000393416 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
MDM2-212ENST00000393416 NCAPD3P42695 1498 aa14.6□□□□□ -0.07
MDM2-212ENST00000393416 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
MDM2-212ENST00000393416 RIMBP3CA6NJZ7 1639 aa14.55□□□□□ -0.08
MDM2-212ENST00000393416 RIMBP3BA6NNM3 1639 aa14.55□□□□□ -0.08
MDM2-212ENST00000393416 RIMBP3Q9UFD9 1639 aa14.55□□□□□ -0.08
MDM2-212ENST00000393416 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
MDM2-212ENST00000393416 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.08
MDM2-212ENST00000393416 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
MDM2-212ENST00000393416 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
MDM2-212ENST00000393416 PIAS4Q8N2W9 510 aaPredicted RBP14.46□□□□□ -0.09
MDM2-212ENST00000393416 ZBTB22O15209 634 aa14.45□□□□□ -0.1
MDM2-212ENST00000393416 LAMC3Q9Y6N6 1575 aa14.44□□□□□ -0.1
MDM2-212ENST00000393416 ATAD2BQ9ULI0 1458 aa14.43□□□□□ -0.1
MDM2-212ENST00000393416 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
MDM2-212ENST00000393416 ARHGEF11O15085 1522 aa14.38□□□□□ -0.11
MDM2-212ENST00000393416 ILDR1Q86SU0 546 aaPredicted RBP14.38□□□□□ -0.11
MDM2-212ENST00000393416 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
MDM2-212ENST00000393416 WDR62O43379 1518 aa14.35□□□□□ -0.11
MDM2-212ENST00000393416 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
MDM2-212ENST00000393416 SLC24A1O60721 1099 aa14.3□□□□□ -0.12
MDM2-212ENST00000393416 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
MDM2-212ENST00000393416 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
MDM2-212ENST00000393416 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
MDM2-212ENST00000393416 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
MDM2-212ENST00000393416 RTN4Q9NQC3 1192 aaKnown RBP14.14□□□□□ -0.15
MDM2-212ENST00000393416 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
MDM2-212ENST00000393416 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
MDM2-212ENST00000393416 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
MDM2-212ENST00000393416 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
MDM2-212ENST00000393416 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
MDM2-212ENST00000393416 AMER1Q5JTC6 1135 aaPredicted RBP14□□□□□ -0.17
MDM2-212ENST00000393416 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
MDM2-212ENST00000393416 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
MDM2-212ENST00000393416 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
MDM2-212ENST00000393416 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
MDM2-212ENST00000393416 CHD1O14646 1710 aa13.91□□□□□ -0.18
MDM2-212ENST00000393416 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
MDM2-212ENST00000393416 IFT140Q96RY7 1462 aa13.82□□□□□ -0.2
MDM2-212ENST00000393416 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
MDM2-212ENST00000393416 MROH2BQ7Z745 1585 aa13.79□□□□□ -0.2
MDM2-212ENST00000393416 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
MDM2-212ENST00000393416 CFTRP13569 1480 aa13.74□□□□□ -0.21
MDM2-212ENST00000393416 FBLN2P98095 1184 aa13.74□□□□□ -0.21
MDM2-212ENST00000393416 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
MDM2-212ENST00000393416 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
MDM2-212ENST00000393416 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.228e-7■■■■□ 21
MDM2-212ENST00000393416 ERCC6L2Q5T890 1561 aa13.65□□□□□ -0.22
MDM2-212ENST00000393416 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
MDM2-212ENST00000393416 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
MDM2-212ENST00000393416 FBXO41Q8TF61 875 aa13.61□□□□□ -0.23
MDM2-212ENST00000393416 LMTK3Q96Q04 1460 aa13.61□□□□□ -0.23
MDM2-212ENST00000393416 TOPBP1Q92547 1522 aa13.6□□□□□ -0.23
MDM2-212ENST00000393416 HECW2Q9P2P5 1572 aa13.59□□□□□ -0.23
MDM2-212ENST00000393416 SYNJ1O43426 1573 aa13.58□□□□□ -0.23
MDM2-212ENST00000393416 FKBP8Q14318 412 aa13.58□□□□□ -0.24
MDM2-212ENST00000393416 RNF216Q9NWF9 866 aaPredicted RBP13.58□□□□□ -0.24
MDM2-212ENST00000393416 WIZO95785 1651 aa13.57□□□□□ -0.24
MDM2-212ENST00000393416 TARBP1Q13395 1621 aaKnown RBP13.57□□□□□ -0.24
MDM2-212ENST00000393416 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
MDM2-212ENST00000393416 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
MDM2-212ENST00000393416 SOCS7O14512 581 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms