RNA–Protein interactions for RNA: ENST00000392270.3

RAET1E-203, retinoic acid early transcript 1E, humanhuman

TSL 2

Gene RAET1E, Length 743 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1E-203ENST00000392270 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
RAET1E-203ENST00000392270 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
RAET1E-203ENST00000392270 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
RAET1E-203ENST00000392270 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
RAET1E-203ENST00000392270 FOXD1Q16676 465 aa23.07■■□□□ 1.28
RAET1E-203ENST00000392270 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
RAET1E-203ENST00000392270 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
RAET1E-203ENST00000392270 MSH5O43196 834 aa21.61■■□□□ 1.05
RAET1E-203ENST00000392270 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
RAET1E-203ENST00000392270 PIAS4Q8N2W9 510 aaPredicted RBP21.47■■□□□ 1.03
RAET1E-203ENST00000392270 ADRA2BP18089 450 aa21.37■■□□□ 1.01
RAET1E-203ENST00000392270 POTEDQ86YR6 584 aa21.32■■□□□ 1
RAET1E-203ENST00000392270 ABCC9O60706 1549 aa20.81■□□□□ 0.92
RAET1E-203ENST00000392270 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
RAET1E-203ENST00000392270 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
RAET1E-203ENST00000392270 MAPK8IP2Q13387 824 aaPredicted RBP19.67■□□□□ 0.74
RAET1E-203ENST00000392270 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
RAET1E-203ENST00000392270 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
RAET1E-203ENST00000392270 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
RAET1E-203ENST00000392270 NACADO15069 1562 aa19.44■□□□□ 0.7
RAET1E-203ENST00000392270 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
RAET1E-203ENST00000392270 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
RAET1E-203ENST00000392270 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
RAET1E-203ENST00000392270 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
RAET1E-203ENST00000392270 PPP4R3CPQ6ZMV5 832 aa19.09■□□□□ 0.65
RAET1E-203ENST00000392270 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
RAET1E-203ENST00000392270 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
RAET1E-203ENST00000392270 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
RAET1E-203ENST00000392270 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
RAET1E-203ENST00000392270 CC2D2AQ9P2K1 1620 aa18.78■□□□□ 0.6
RAET1E-203ENST00000392270 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
RAET1E-203ENST00000392270 CNKSR2Q8WXI2 1034 aa18.76■□□□□ 0.59
RAET1E-203ENST00000392270 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
RAET1E-203ENST00000392270 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
RAET1E-203ENST00000392270 EIF4G1Q04637 1599 aaKnown RBP18.67■□□□□ 0.58
RAET1E-203ENST00000392270 RNF216Q9NWF9 866 aaPredicted RBP18.65■□□□□ 0.58
RAET1E-203ENST00000392270 DCAF8L1A6NGE4 600 aa18.64■□□□□ 0.57
RAET1E-203ENST00000392270 CACNB1Q02641 598 aaPredicted RBP18.55■□□□□ 0.56
RAET1E-203ENST00000392270 RNF39Q9H2S5 420 aa18.47■□□□□ 0.55
RAET1E-203ENST00000392270 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
RAET1E-203ENST00000392270 C1QBPQ07021 282 aaKnown RBP18.16■□□□□ 0.5
RAET1E-203ENST00000392270 DNAJC5Q9H3Z4 198 aa18.12■□□□□ 0.49
RAET1E-203ENST00000392270 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
RAET1E-203ENST00000392270 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
RAET1E-203ENST00000392270 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
RAET1E-203ENST00000392270 CUX2O14529 1486 aa17.91■□□□□ 0.46
RAET1E-203ENST00000392270 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
RAET1E-203ENST00000392270 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
RAET1E-203ENST00000392270 NESP48681 1621 aa17.84■□□□□ 0.45
RAET1E-203ENST00000392270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.45
RAET1E-203ENST00000392270 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
RAET1E-203ENST00000392270 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
RAET1E-203ENST00000392270 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
RAET1E-203ENST00000392270 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
RAET1E-203ENST00000392270 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
RAET1E-203ENST00000392270 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.41
RAET1E-203ENST00000392270 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
RAET1E-203ENST00000392270 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
RAET1E-203ENST00000392270 KCNA4P22459 653 aa17.62■□□□□ 0.41
RAET1E-203ENST00000392270 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
RAET1E-203ENST00000392270 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
RAET1E-203ENST00000392270 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
RAET1E-203ENST00000392270 WIZO95785 1651 aa17.45■□□□□ 0.38
RAET1E-203ENST00000392270 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
RAET1E-203ENST00000392270 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
RAET1E-203ENST00000392270 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
RAET1E-203ENST00000392270 WDR62O43379 1518 aa17.35■□□□□ 0.37
RAET1E-203ENST00000392270 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
RAET1E-203ENST00000392270 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
RAET1E-203ENST00000392270 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
RAET1E-203ENST00000392270 DSG3P32926 999 aa17.24■□□□□ 0.35
RAET1E-203ENST00000392270 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
RAET1E-203ENST00000392270 CAPN15O75808 1086 aa17.21■□□□□ 0.35
RAET1E-203ENST00000392270 CFTRP13569 1480 aa17.16■□□□□ 0.34
RAET1E-203ENST00000392270 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
RAET1E-203ENST00000392270 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
RAET1E-203ENST00000392270 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
RAET1E-203ENST00000392270 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
RAET1E-203ENST00000392270 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
RAET1E-203ENST00000392270 ZNF608Q9ULD9 1512 aaPredicted RBP16.98■□□□□ 0.31
RAET1E-203ENST00000392270 RIMBP3CA6NJZ7 1639 aa16.97■□□□□ 0.31
RAET1E-203ENST00000392270 RIMBP3BA6NNM3 1639 aa16.97■□□□□ 0.31
RAET1E-203ENST00000392270 RIMBP3Q9UFD9 1639 aa16.97■□□□□ 0.31
RAET1E-203ENST00000392270 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
RAET1E-203ENST00000392270 APLP2Q06481 763 aa16.95■□□□□ 0.3
RAET1E-203ENST00000392270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
RAET1E-203ENST00000392270 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
RAET1E-203ENST00000392270 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
RAET1E-203ENST00000392270 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
RAET1E-203ENST00000392270 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
RAET1E-203ENST00000392270 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
RAET1E-203ENST00000392270 EIF4G3O43432 1585 aaKnown RBP16.88■□□□□ 0.29
RAET1E-203ENST00000392270 SAMD1Q6SPF0 538 aaPredicted RBP16.86■□□□□ 0.29
RAET1E-203ENST00000392270 ARHGEF11O15085 1522 aa16.85■□□□□ 0.29
RAET1E-203ENST00000392270 CHD1O14646 1710 aa16.84■□□□□ 0.29
RAET1E-203ENST00000392270 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
RAET1E-203ENST00000392270 ABCB7O75027 752 aa16.82■□□□□ 0.28
RAET1E-203ENST00000392270 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
RAET1E-203ENST00000392270 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.28
RAET1E-203ENST00000392270 ABCC8Q09428 1581 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms