RNA–Protein interactions for RNA: ENST00000390593.2

IGHV6-1-201, Transcript of immunoglobulin heavy variable 6-1, humanhuman

APPRIS P1 BASIC

Gene IGHV6-1, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV6-1-201ENST00000390593 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
IGHV6-1-201ENST00000390593 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
IGHV6-1-201ENST00000390593 NISCHQ9Y2I1 1504 aa16.45■□□□□ 0.22
IGHV6-1-201ENST00000390593 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
IGHV6-1-201ENST00000390593 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
IGHV6-1-201ENST00000390593 ABCC9O60706 1549 aa14.98□□□□□ -0.01
IGHV6-1-201ENST00000390593 CCDC180Q9P1Z9 1646 aa14.74□□□□□ -0.05
IGHV6-1-201ENST00000390593 PLPPR3Q6T4P5 718 aa14.65□□□□□ -0.06
IGHV6-1-201ENST00000390593 FOXD1Q16676 465 aa14.34□□□□□ -0.11
IGHV6-1-201ENST00000390593 RB1CC1Q8TDY2 1594 aa14.13□□□□□ -0.15
IGHV6-1-201ENST00000390593 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
IGHV6-1-201ENST00000390593 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
IGHV6-1-201ENST00000390593 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
IGHV6-1-201ENST00000390593 NACADO15069 1562 aa13.99□□□□□ -0.17
IGHV6-1-201ENST00000390593 ADRA2BP18089 450 aa13.98□□□□□ -0.17
IGHV6-1-201ENST00000390593 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
IGHV6-1-201ENST00000390593 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
IGHV6-1-201ENST00000390593 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
IGHV6-1-201ENST00000390593 MYO15BQ96JP2 1530 aa13.7□□□□□ -0.22
IGHV6-1-201ENST00000390593 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
IGHV6-1-201ENST00000390593 SCRIBQ14160 1630 aa13.55□□□□□ -0.24
IGHV6-1-201ENST00000390593 PIAS4Q8N2W9 510 aaPredicted RBP13.55□□□□□ -0.24
IGHV6-1-201ENST00000390593 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
IGHV6-1-201ENST00000390593 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
IGHV6-1-201ENST00000390593 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
IGHV6-1-201ENST00000390593 SHROOM4Q9ULL8 1493 aa13.46□□□□□ -0.25
IGHV6-1-201ENST00000390593 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
IGHV6-1-201ENST00000390593 MSH5O43196 834 aa13.08□□□□□ -0.32
IGHV6-1-201ENST00000390593 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
IGHV6-1-201ENST00000390593 PPP4R3CPQ6ZMV5 832 aa12.98□□□□□ -0.33
IGHV6-1-201ENST00000390593 ERCC6Q03468 1493 aa12.95□□□□□ -0.34
IGHV6-1-201ENST00000390593 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
IGHV6-1-201ENST00000390593 KCNA4P22459 653 aa12.91□□□□□ -0.34
IGHV6-1-201ENST00000390593 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
IGHV6-1-201ENST00000390593 CUX2O14529 1486 aa12.88□□□□□ -0.35
IGHV6-1-201ENST00000390593 SMARCA4P51532 1647 aa12.85□□□□□ -0.35
IGHV6-1-201ENST00000390593 SMARCA2P51531 1590 aa12.85□□□□□ -0.35
IGHV6-1-201ENST00000390593 NESP48681 1621 aa12.83□□□□□ -0.36
IGHV6-1-201ENST00000390593 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
IGHV6-1-201ENST00000390593 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
IGHV6-1-201ENST00000390593 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.36
IGHV6-1-201ENST00000390593 MROH2BQ7Z745 1585 aa12.7□□□□□ -0.38
IGHV6-1-201ENST00000390593 PEG3Q9GZU2 1588 aa12.67□□□□□ -0.38
IGHV6-1-201ENST00000390593 SCAF1Q9H7N4 1312 aaKnown RBP12.66□□□□□ -0.38
IGHV6-1-201ENST00000390593 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
IGHV6-1-201ENST00000390593 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
IGHV6-1-201ENST00000390593 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
IGHV6-1-201ENST00000390593 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
IGHV6-1-201ENST00000390593 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
IGHV6-1-201ENST00000390593 KIF21AQ7Z4S6 1674 aa12.61□□□□□ -0.39
IGHV6-1-201ENST00000390593 CADPSQ9ULU8 1353 aa12.57□□□□□ -0.4
IGHV6-1-201ENST00000390593 WIZO95785 1651 aa12.54□□□□□ -0.4
IGHV6-1-201ENST00000390593 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
IGHV6-1-201ENST00000390593 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
IGHV6-1-201ENST00000390593 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
IGHV6-1-201ENST00000390593 MRC2Q9UBG0 1479 aa12.52□□□□□ -0.41
IGHV6-1-201ENST00000390593 CEP164Q9UPV0 1460 aa12.46□□□□□ -0.42
IGHV6-1-201ENST00000390593 WDR62O43379 1518 aa12.45□□□□□ -0.42
IGHV6-1-201ENST00000390593 FANCD2Q9BXW9 1451 aa12.44□□□□□ -0.42
IGHV6-1-201ENST00000390593 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
IGHV6-1-201ENST00000390593 CFTRP13569 1480 aa12.38□□□□□ -0.43
IGHV6-1-201ENST00000390593 TOP2AP11388 1531 aaKnown RBP12.36□□□□□ -0.43
IGHV6-1-201ENST00000390593 DMRT2Q9Y5R5 561 aa12.35□□□□□ -0.43
IGHV6-1-201ENST00000390593 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
IGHV6-1-201ENST00000390593 URB2Q14146 1524 aaKnown RBP12.33□□□□□ -0.44
IGHV6-1-201ENST00000390593 SLC4A1APQ9BWU0 796 aaKnown RBP12.3□□□□□ -0.44
IGHV6-1-201ENST00000390593 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
IGHV6-1-201ENST00000390593 RNF216Q9NWF9 866 aaPredicted RBP12.24□□□□□ -0.45
IGHV6-1-201ENST00000390593 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.45
IGHV6-1-201ENST00000390593 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
IGHV6-1-201ENST00000390593 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
IGHV6-1-201ENST00000390593 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
IGHV6-1-201ENST00000390593 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
IGHV6-1-201ENST00000390593 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
IGHV6-1-201ENST00000390593 RIMBP3CA6NJZ7 1639 aa12.15□□□□□ -0.47
IGHV6-1-201ENST00000390593 RIMBP3BA6NNM3 1639 aa12.15□□□□□ -0.47
IGHV6-1-201ENST00000390593 RIMBP3Q9UFD9 1639 aa12.15□□□□□ -0.47
IGHV6-1-201ENST00000390593 FBLN2P98095 1184 aa12.14□□□□□ -0.47
IGHV6-1-201ENST00000390593 AQRO60306 1485 aaKnown RBP eCLIP12.12□□□□□ -0.47
IGHV6-1-201ENST00000390593 EIF4G3O43432 1585 aaKnown RBP12.11□□□□□ -0.47
IGHV6-1-201ENST00000390593 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
IGHV6-1-201ENST00000390593 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
IGHV6-1-201ENST00000390593 ABCC8Q09428 1581 aa12.1□□□□□ -0.47
IGHV6-1-201ENST00000390593 CYB5RLQ6IPT4 315 aa12.1□□□□□ -0.47
IGHV6-1-201ENST00000390593 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
IGHV6-1-201ENST00000390593 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
IGHV6-1-201ENST00000390593 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
IGHV6-1-201ENST00000390593 CHD1O14646 1710 aa12.04□□□□□ -0.48
IGHV6-1-201ENST00000390593 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
IGHV6-1-201ENST00000390593 TDRD9Q8NDG6 1382 aaKnown RBP12.04□□□□□ -0.48
IGHV6-1-201ENST00000390593 SOGA1O94964 1423 aa12.02□□□□□ -0.49
IGHV6-1-201ENST00000390593 ARAP1Q96P48 1450 aa11.99□□□□□ -0.49
IGHV6-1-201ENST00000390593 FGD5Q6ZNL6 1462 aa11.98□□□□□ -0.49
IGHV6-1-201ENST00000390593 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
IGHV6-1-201ENST00000390593 SNAPC4Q5SXM2 1469 aa11.97□□□□□ -0.49
IGHV6-1-201ENST00000390593 CSRNP3Q8WYN3 585 aa11.97□□□□□ -0.49
IGHV6-1-201ENST00000390593 CUX1P39880 1505 aa11.94□□□□□ -0.5
IGHV6-1-201ENST00000390593 SUPT5HO00267 1087 aaKnown RBP11.92□□□□□ -0.5
IGHV6-1-201ENST00000390593 GRIN2BQ13224 1484 aa11.9□□□□□ -0.5
IGHV6-1-201ENST00000390593 ZBTB22O15209 634 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 400 ms