RNA–Protein interactions for RNA: ENST00000389794.7

LYST-202, Transcript of lysosomal trafficking regulator, humanhuman

TSL 5 BASIC

Gene LYST, Length 12,985 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-202ENST00000389794 NISCHQ9Y2I1 1504 aa9.9□□□□□ -0.82
LYST-202ENST00000389794 DCAF8L2P0C7V8 631 aa9.52□□□□□ -0.88
LYST-202ENST00000389794 CCDC180Q9P1Z9 1646 aa8.77□□□□□ -1.01
LYST-202ENST00000389794 ABCC9O60706 1549 aa8.73□□□□□ -1.01
LYST-202ENST00000389794 SHROOM4Q9ULL8 1493 aa8.5□□□□□ -1.05
LYST-202ENST00000389794 PABPN1Q86U42 306 aaKnown RBP eCLIP8.45□□□□□ -1.06
LYST-202ENST00000389794 DCAF1Q9Y4B6 1507 aa8.39□□□□□ -1.07
LYST-202ENST00000389794 ZCCHC6Q5VYS8 1495 aaKnown RBP8.38□□□□□ -1.07
LYST-202ENST00000389794 MYO15BQ96JP2 1530 aa8.36□□□□□ -1.07
LYST-202ENST00000389794 SUPT5HO00267 1087 aaKnown RBP8.25□□□□□ -1.09
LYST-202ENST00000389794 FAM9AQ8IZU1 332 aaPredicted RBP8.16□□□□□ -1.1
LYST-202ENST00000389794 RB1CC1Q8TDY2 1594 aa8.13□□□□□ -1.11
LYST-202ENST00000389794 NACADO15069 1562 aa8.1□□□□□ -1.11
LYST-202ENST00000389794 EHMT2Q96KQ7 1210 aa8.06□□□□□ -1.12
LYST-202ENST00000389794 SCRIBQ14160 1630 aa8.04□□□□□ -1.12
LYST-202ENST00000389794 TTBK1Q5TCY1 1321 aaPredicted RBP8.04□□□□□ -1.12
LYST-202ENST00000389794 FBLN2P98095 1184 aa7.97□□□□□ -1.13
LYST-202ENST00000389794 ATP1B4Q9UN42 357 aaPredicted RBP7.96□□□□□ -1.14
LYST-202ENST00000389794 RANGAP1P46060 587 aaPredicted RBP7.93□□□□□ -1.14
LYST-202ENST00000389794 ERCC6Q03468 1493 aa7.89□□□□□ -1.15
LYST-202ENST00000389794 MYT1LQ9UL68 1186 aa7.88□□□□□ -1.15
LYST-202ENST00000389794 TRIM41Q8WV44 630 aa7.85□□□□□ -1.15
LYST-202ENST00000389794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.81□□□□□ -1.16
LYST-202ENST00000389794 HNRNPUL2Q1KMD3 747 aaKnown RBP7.81□□□□□ -1.16
LYST-202ENST00000389794 TRHP20396 242 aaPredicted RBP7.78□□□□□ -1.16
LYST-202ENST00000389794 PELP1Q8IZL8 1130 aaKnown RBP7.77□□□□□ -1.17
LYST-202ENST00000389794 BAZ1AQ9NRL2 1556 aaPredicted RBP7.76□□□□□ -1.17
LYST-202ENST00000389794 CECR2Q9BXF3 1484 aa7.72□□□□□ -1.17
LYST-202ENST00000389794 APLP2Q06481 763 aa7.71□□□□□ -1.17
LYST-202ENST00000389794 NPM1P06748 294 aaKnown RBP eCLIP7.7□□□□□ -1.18
LYST-202ENST00000389794 AEBP2Q6ZN18 517 aaPredicted RBP7.69□□□□□ -1.18
LYST-202ENST00000389794 CHIC1Q5VXU3 224 aa7.68□□□□□ -1.18
LYST-202ENST00000389794 PLPPR3Q6T4P5 718 aa7.67□□□□□ -1.18
LYST-202ENST00000389794 UBTFP17480 764 aaKnown RBP7.67□□□□□ -1.18
LYST-202ENST00000389794 RSF1Q96T23 1441 aaPredicted RBP7.65□□□□□ -1.19
LYST-202ENST00000389794 DNAJC5BQ9UF47 199 aa7.63□□□□□ -1.19
LYST-202ENST00000389794 CHMP7Q8WUX9 453 aaPredicted RBP7.62□□□□□ -1.19
LYST-202ENST00000389794 PEG3Q9GZU2 1588 aa7.62□□□□□ -1.19
LYST-202ENST00000389794 BAZ1BQ9UIG0 1483 aaKnown RBP7.61□□□□□ -1.19
LYST-202ENST00000389794 SMARCA4P51532 1647 aa7.59□□□□□ -1.19
LYST-202ENST00000389794 SMARCA2P51531 1590 aa7.58□□□□□ -1.2
LYST-202ENST00000389794 UNC13AQ9UPW8 1703 aa7.58□□□□□ -1.2
LYST-202ENST00000389794 CC2D2AQ9P2K1 1620 aa7.58□□□□□ -1.2
LYST-202ENST00000389794 TOP2AP11388 1531 aaKnown RBP7.56□□□□□ -1.2
LYST-202ENST00000389794 MYT1Q01538 1121 aa7.55□□□□□ -1.2
LYST-202ENST00000389794 MROH2BQ7Z745 1585 aa7.52□□□□□ -1.21
LYST-202ENST00000389794 BICRAQ9NZM4 1560 aa7.52□□□□□ -1.21
LYST-202ENST00000389794 HMGXB3Q12766 1538 aa7.51□□□□□ -1.21
LYST-202ENST00000389794 ARID3CA6NKF2 412 aa7.5□□□□□ -1.21
LYST-202ENST00000389794 PDS5BQ9NTI5 1447 aa7.49□□□□□ -1.21
LYST-202ENST00000389794 ESF1Q9H501 851 aaKnown RBP7.49□□□□□ -1.21
LYST-202ENST00000389794 EIF4G1Q04637 1599 aaKnown RBP7.49□□□□□ -1.21
LYST-202ENST00000389794 CYB5RLQ6IPT4 315 aa7.47□□□□□ -1.21
LYST-202ENST00000389794 P3H3Q8IVL6 736 aa7.47□□□□□ -1.21
LYST-202ENST00000389794 BCANQ96GW7 911 aa7.45□□□□□ -1.22
LYST-202ENST00000389794 OSCARQ8IYS5 282 aa7.45□□□□□ -1.22
LYST-202ENST00000389794 EEA1Q15075 1411 aa7.44□□□□□ -1.22
LYST-202ENST00000389794 ARID4BQ4LE39 1312 aaPredicted RBP7.43□□□□□ -1.22
LYST-202ENST00000389794 NCAPD3P42695 1498 aa7.42□□□□□ -1.22
LYST-202ENST00000389794 WIZO95785 1651 aa7.42□□□□□ -1.22
LYST-202ENST00000389794 CEP164Q9UPV0 1460 aa7.4□□□□□ -1.22
LYST-202ENST00000389794 KCNH8Q96L42 1107 aa7.4□□□□□ -1.23
LYST-202ENST00000389794 ATAD2BQ9ULI0 1458 aa7.39□□□□□ -1.23
LYST-202ENST00000389794 YTHDC1Q96MU7 727 aaKnown RBP7.37□□□□□ -1.23
LYST-202ENST00000389794 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
LYST-202ENST00000389794 ERICH6Q7L0X2 663 aa7.35□□□□□ -1.23
LYST-202ENST00000389794 ITGAEP38570 1179 aa7.34□□□□□ -1.23
LYST-202ENST00000389794 CCDC88BA6NC98 1476 aa7.33□□□□□ -1.24
LYST-202ENST00000389794 ZNF777Q9ULD5 760 aaPredicted RBP7.33□□□□□ -1.24
LYST-202ENST00000389794 STAG3Q9UJ98 1225 aa7.31□□□□□ -1.24
LYST-202ENST00000389794 SOGA1O94964 1423 aa7.29□□□□□ -1.24
LYST-202ENST00000389794 FANCD2Q9BXW9 1451 aa7.29□□□□□ -1.24
LYST-202ENST00000389794 WRNQ14191 1432 aaPredicted RBP eCLIP7.29□□□□□ -1.24
LYST-202ENST00000389794 NESP48681 1621 aa7.29□□□□□ -1.24
LYST-202ENST00000389794 CADPSQ9ULU8 1353 aa7.28□□□□□ -1.24
LYST-202ENST00000389794 SENP3Q9H4L4 574 aaPredicted RBP7.28□□□□□ -1.24
LYST-202ENST00000389794 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
LYST-202ENST00000389794 CDK11AQ9UQ88 783 aaPredicted RBP7.28□□□□□ -1.24
LYST-202ENST00000389794 CFTRP13569 1480 aa7.27□□□□□ -1.25
LYST-202ENST00000389794 SCAF1Q9H7N4 1312 aaKnown RBP7.27□□□□□ -1.25
LYST-202ENST00000389794 PRDM2Q13029 1718 aa7.27□□□□□ -1.25
LYST-202ENST00000389794 FAM50AQ14320 339 aaKnown RBP7.26□□□□□ -1.25
LYST-202ENST00000389794 MLECQ14165 292 aa7.25□□□□□ -1.25
LYST-202ENST00000389794 SLC4A1APQ9BWU0 796 aaKnown RBP7.25□□□□□ -1.25
LYST-202ENST00000389794 ABCC8Q09428 1581 aa7.24□□□□□ -1.25
LYST-202ENST00000389794 TOP2BQ02880 1626 aa7.23□□□□□ -1.25
LYST-202ENST00000389794 TDRD9Q8NDG6 1382 aaKnown RBP7.23□□□□□ -1.25
LYST-202ENST00000389794 BIVM-ERCC5R4GMW8 1640 aa7.23□□□□□ -1.25
LYST-202ENST00000389794 CHGAP10645 457 aaKnown RBP7.22□□□□□ -1.25
LYST-202ENST00000389794 MRC2Q9UBG0 1479 aa7.22□□□□□ -1.25
LYST-202ENST00000389794 FAM69CQ0P6D2 419 aa7.2□□□□□ -1.26
LYST-202ENST00000389794 LAMC3Q9Y6N6 1575 aa7.2□□□□□ -1.26
LYST-202ENST00000389794 ERICH3Q5RHP9 1530 aa7.2□□□□□ -1.26
LYST-202ENST00000389794 GOLGA3Q08378 1498 aa7.2□□□□□ -1.26
LYST-202ENST00000389794 KIF21BO75037 1637 aa7.19□□□□□ -1.26
LYST-202ENST00000389794 PLEKHD1A6NEE1 506 aa7.19□□□□□ -1.26
LYST-202ENST00000389794 TRIM52Q96A61 297 aa7.18□□□□□ -1.26
LYST-202ENST00000389794 CUX2O14529 1486 aa7.17□□□□□ -1.26
LYST-202ENST00000389794 KIF21AQ7Z4S6 1674 aa7.17□□□□□ -1.26
LYST-202ENST00000389794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms