RNA–Protein interactions for RNA: ENST00000388789.4

TTC41P-201, Transcript of tetratricopeptide repeat domain 41, pseudogene, humanhuman

TSL 1 (best)

Gene TTC41P, Length 1,372 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41P-201ENST00000388789 AEBP2Q6ZN18 517 aaPredicted RBP23.39■■□□□ 1.33
TTC41P-201ENST00000388789 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
TTC41P-201ENST00000388789 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
TTC41P-201ENST00000388789 PHF23Q9BUL5 403 aaPredicted RBP19.75■□□□□ 0.75
TTC41P-201ENST00000388789 FOXD1Q16676 465 aa18.81■□□□□ 0.6
TTC41P-201ENST00000388789 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
TTC41P-201ENST00000388789 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
TTC41P-201ENST00000388789 MSH5O43196 834 aa17.91■□□□□ 0.46
TTC41P-201ENST00000388789 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
TTC41P-201ENST00000388789 PPP6R1Q9UPN7 881 aa17.04■□□□□ 0.32
TTC41P-201ENST00000388789 ADRA2BP18089 450 aa16.97■□□□□ 0.31
TTC41P-201ENST00000388789 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
TTC41P-201ENST00000388789 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
TTC41P-201ENST00000388789 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
TTC41P-201ENST00000388789 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
TTC41P-201ENST00000388789 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
TTC41P-201ENST00000388789 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
TTC41P-201ENST00000388789 ABCC9O60706 1549 aa15.41■□□□□ 0.06
TTC41P-201ENST00000388789 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
TTC41P-201ENST00000388789 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
TTC41P-201ENST00000388789 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
TTC41P-201ENST00000388789 DCAF1Q9Y4B6 1507 aa15.05■□□□□ -0
TTC41P-201ENST00000388789 HOXD11P31277 338 aaPredicted RBP14.97□□□□□ -0.01
TTC41P-201ENST00000388789 SHROOM4Q9ULL8 1493 aa14.96□□□□□ -0.01
TTC41P-201ENST00000388789 C1QBPQ07021 282 aaKnown RBP14.95□□□□□ -0.02
TTC41P-201ENST00000388789 DCAF8L2P0C7V8 631 aa14.92□□□□□ -0.02
TTC41P-201ENST00000388789 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
TTC41P-201ENST00000388789 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.04
TTC41P-201ENST00000388789 RB1CC1Q8TDY2 1594 aa14.71□□□□□ -0.05
TTC41P-201ENST00000388789 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
TTC41P-201ENST00000388789 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
TTC41P-201ENST00000388789 NACADO15069 1562 aa14.65□□□□□ -0.06
TTC41P-201ENST00000388789 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
TTC41P-201ENST00000388789 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
TTC41P-201ENST00000388789 POTEHQ6S545 545 aa14.47□□□□□ -0.09
TTC41P-201ENST00000388789 SCRIBQ14160 1630 aa14.46□□□□□ -0.09
TTC41P-201ENST00000388789 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
TTC41P-201ENST00000388789 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
TTC41P-201ENST00000388789 KCNA4P22459 653 aa14.36□□□□□ -0.11
TTC41P-201ENST00000388789 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
TTC41P-201ENST00000388789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
TTC41P-201ENST00000388789 BICRAQ9NZM4 1560 aa14.27□□□□□ -0.13
TTC41P-201ENST00000388789 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
TTC41P-201ENST00000388789 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
TTC41P-201ENST00000388789 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
TTC41P-201ENST00000388789 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
TTC41P-201ENST00000388789 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
TTC41P-201ENST00000388789 DSG3P32926 999 aa13.98□□□□□ -0.17
TTC41P-201ENST00000388789 CAPN15O75808 1086 aa13.96□□□□□ -0.18
TTC41P-201ENST00000388789 WIZO95785 1651 aa13.93□□□□□ -0.18
TTC41P-201ENST00000388789 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
TTC41P-201ENST00000388789 CC2D2AQ9P2K1 1620 aa13.91□□□□□ -0.18
TTC41P-201ENST00000388789 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
TTC41P-201ENST00000388789 SMARCA4P51532 1647 aa13.9□□□□□ -0.18
TTC41P-201ENST00000388789 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
TTC41P-201ENST00000388789 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
TTC41P-201ENST00000388789 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
TTC41P-201ENST00000388789 TRIM41Q8WV44 630 aa13.71□□□□□ -0.22
TTC41P-201ENST00000388789 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
TTC41P-201ENST00000388789 SMARCA2P51531 1590 aa13.67□□□□□ -0.22
TTC41P-201ENST00000388789 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
TTC41P-201ENST00000388789 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
TTC41P-201ENST00000388789 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
TTC41P-201ENST00000388789 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
TTC41P-201ENST00000388789 ABCB7O75027 752 aa13.56□□□□□ -0.24
TTC41P-201ENST00000388789 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
TTC41P-201ENST00000388789 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
TTC41P-201ENST00000388789 APLP2Q06481 763 aa13.5□□□□□ -0.25
TTC41P-201ENST00000388789 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
TTC41P-201ENST00000388789 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
TTC41P-201ENST00000388789 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
TTC41P-201ENST00000388789 FAM9AQ8IZU1 332 aaPredicted RBP13.42□□□□□ -0.26
TTC41P-201ENST00000388789 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
TTC41P-201ENST00000388789 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
TTC41P-201ENST00000388789 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
TTC41P-201ENST00000388789 WRNQ14191 1432 aaPredicted RBP eCLIP13.35□□□□□ -0.27
TTC41P-201ENST00000388789 EEA1Q15075 1411 aa13.34□□□□□ -0.27
TTC41P-201ENST00000388789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
TTC41P-201ENST00000388789 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
TTC41P-201ENST00000388789 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
TTC41P-201ENST00000388789 NESP48681 1621 aa13.29□□□□□ -0.28
TTC41P-201ENST00000388789 SYNJ1O43426 1573 aa13.26□□□□□ -0.29
TTC41P-201ENST00000388789 SOGA1O94964 1423 aa13.26□□□□□ -0.29
TTC41P-201ENST00000388789 CSRNP3Q8WYN3 585 aa13.24□□□□□ -0.29
TTC41P-201ENST00000388789 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
TTC41P-201ENST00000388789 CFTRP13569 1480 aa13.23□□□□□ -0.29
TTC41P-201ENST00000388789 SP7Q8TDD2 431 aaPredicted RBP13.23□□□□□ -0.29
TTC41P-201ENST00000388789 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
TTC41P-201ENST00000388789 ZBTB22O15209 634 aa13.22□□□□□ -0.29
TTC41P-201ENST00000388789 PCGF6Q9BYE7 350 aa13.21□□□□□ -0.29
TTC41P-201ENST00000388789 TOP2BQ02880 1626 aa13.21□□□□□ -0.29
TTC41P-201ENST00000388789 TRIM26Q12899 539 aaPredicted RBP13.2□□□□□ -0.3
TTC41P-201ENST00000388789 BIVM-ERCC5R4GMW8 1640 aa13.19□□□□□ -0.3
TTC41P-201ENST00000388789 LAMC3Q9Y6N6 1575 aa13.19□□□□□ -0.3
TTC41P-201ENST00000388789 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
TTC41P-201ENST00000388789 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
TTC41P-201ENST00000388789 CUX2O14529 1486 aa13.18□□□□□ -0.3
TTC41P-201ENST00000388789 PRDM2Q13029 1718 aa13.17□□□□□ -0.3
TTC41P-201ENST00000388789 TNIKQ9UKE5 1360 aa13.16□□□□□ -0.3
TTC41P-201ENST00000388789 CADPSQ9ULU8 1353 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms