RNA–Protein interactions for RNA: ENST00000373735.1

CTNNA3-202, Transcript of catenin alpha 3, humanhuman

TSL 2

Gene CTNNA3, Length 1,083 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-202ENST00000373735 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
CTNNA3-202ENST00000373735 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
CTNNA3-202ENST00000373735 NISCHQ9Y2I1 1504 aa21.08■□□□□ 0.96
CTNNA3-202ENST00000373735 SENP3Q9H4L4 574 aaPredicted RBP21.07■□□□□ 0.96
CTNNA3-202ENST00000373735 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
CTNNA3-202ENST00000373735 FOXD1Q16676 465 aa19.65■□□□□ 0.74
CTNNA3-202ENST00000373735 ABCC9O60706 1549 aa19.44■□□□□ 0.7
CTNNA3-202ENST00000373735 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
CTNNA3-202ENST00000373735 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
CTNNA3-202ENST00000373735 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
CTNNA3-202ENST00000373735 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
CTNNA3-202ENST00000373735 ADRA2BP18089 450 aa18.44■□□□□ 0.54
CTNNA3-202ENST00000373735 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
CTNNA3-202ENST00000373735 RB1CC1Q8TDY2 1594 aa18.36■□□□□ 0.53
CTNNA3-202ENST00000373735 MSH5O43196 834 aa18.28■□□□□ 0.52
CTNNA3-202ENST00000373735 NACADO15069 1562 aa18.15■□□□□ 0.5
CTNNA3-202ENST00000373735 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
CTNNA3-202ENST00000373735 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
CTNNA3-202ENST00000373735 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
CTNNA3-202ENST00000373735 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
CTNNA3-202ENST00000373735 MYO15BQ96JP2 1530 aa17.8■□□□□ 0.44
CTNNA3-202ENST00000373735 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
CTNNA3-202ENST00000373735 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
CTNNA3-202ENST00000373735 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.41
CTNNA3-202ENST00000373735 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
CTNNA3-202ENST00000373735 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
CTNNA3-202ENST00000373735 DCAF1Q9Y4B6 1507 aa17.41■□□□□ 0.38
CTNNA3-202ENST00000373735 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
CTNNA3-202ENST00000373735 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
CTNNA3-202ENST00000373735 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
CTNNA3-202ENST00000373735 CUX2O14529 1486 aa16.96■□□□□ 0.31
CTNNA3-202ENST00000373735 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
CTNNA3-202ENST00000373735 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
CTNNA3-202ENST00000373735 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
CTNNA3-202ENST00000373735 NCAPD3P42695 1498 aa16.77■□□□□ 0.28
CTNNA3-202ENST00000373735 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
CTNNA3-202ENST00000373735 KCNA4P22459 653 aa16.73■□□□□ 0.27
CTNNA3-202ENST00000373735 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
CTNNA3-202ENST00000373735 ATAD2BQ9ULI0 1458 aa16.64■□□□□ 0.25
CTNNA3-202ENST00000373735 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
CTNNA3-202ENST00000373735 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
CTNNA3-202ENST00000373735 NESP48681 1621 aa16.58■□□□□ 0.24
CTNNA3-202ENST00000373735 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
CTNNA3-202ENST00000373735 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
CTNNA3-202ENST00000373735 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
CTNNA3-202ENST00000373735 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
CTNNA3-202ENST00000373735 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
CTNNA3-202ENST00000373735 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
CTNNA3-202ENST00000373735 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
CTNNA3-202ENST00000373735 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
CTNNA3-202ENST00000373735 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
CTNNA3-202ENST00000373735 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.2
CTNNA3-202ENST00000373735 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
CTNNA3-202ENST00000373735 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
CTNNA3-202ENST00000373735 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
CTNNA3-202ENST00000373735 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
CTNNA3-202ENST00000373735 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.18
CTNNA3-202ENST00000373735 WDR62O43379 1518 aa16.2■□□□□ 0.18
CTNNA3-202ENST00000373735 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
CTNNA3-202ENST00000373735 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
CTNNA3-202ENST00000373735 CEP164Q9UPV0 1460 aa16.09■□□□□ 0.17
CTNNA3-202ENST00000373735 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
CTNNA3-202ENST00000373735 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
CTNNA3-202ENST00000373735 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
CTNNA3-202ENST00000373735 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
CTNNA3-202ENST00000373735 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
CTNNA3-202ENST00000373735 WIZO95785 1651 aa15.98■□□□□ 0.15
CTNNA3-202ENST00000373735 CFTRP13569 1480 aa15.97■□□□□ 0.15
CTNNA3-202ENST00000373735 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
CTNNA3-202ENST00000373735 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
CTNNA3-202ENST00000373735 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
CTNNA3-202ENST00000373735 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
CTNNA3-202ENST00000373735 ARHGEF11O15085 1522 aa15.84■□□□□ 0.13
CTNNA3-202ENST00000373735 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
CTNNA3-202ENST00000373735 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
CTNNA3-202ENST00000373735 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
CTNNA3-202ENST00000373735 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
CTNNA3-202ENST00000373735 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
CTNNA3-202ENST00000373735 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
CTNNA3-202ENST00000373735 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
CTNNA3-202ENST00000373735 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
CTNNA3-202ENST00000373735 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
CTNNA3-202ENST00000373735 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
CTNNA3-202ENST00000373735 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
CTNNA3-202ENST00000373735 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
CTNNA3-202ENST00000373735 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
CTNNA3-202ENST00000373735 CCDC88BA6NC98 1476 aa15.6■□□□□ 0.09
CTNNA3-202ENST00000373735 CHD1O14646 1710 aa15.6■□□□□ 0.09
CTNNA3-202ENST00000373735 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
CTNNA3-202ENST00000373735 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
CTNNA3-202ENST00000373735 FBLN2P98095 1184 aa15.59■□□□□ 0.09
CTNNA3-202ENST00000373735 CACNB1Q02641 598 aaPredicted RBP15.57■□□□□ 0.08
CTNNA3-202ENST00000373735 TARBP1Q13395 1621 aaKnown RBP15.56■□□□□ 0.08
CTNNA3-202ENST00000373735 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
CTNNA3-202ENST00000373735 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
CTNNA3-202ENST00000373735 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
CTNNA3-202ENST00000373735 SOGA1O94964 1423 aa15.43■□□□□ 0.06
CTNNA3-202ENST00000373735 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
CTNNA3-202ENST00000373735 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
CTNNA3-202ENST00000373735 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms