RNA–Protein interactions for RNA: ENST00000370290.7

TMED5-203, Transcript of transmembrane p24 trafficking protein 5, humanhuman

TSL 1 (best)

Gene TMED5, Length 3,847 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED5-203ENST00000370290 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
TMED5-203ENST00000370290 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
TMED5-203ENST00000370290 SHROOM4Q9ULL8 1493 aa21.57■■□□□ 1.04
TMED5-203ENST00000370290 ABCC9O60706 1549 aa21.5■■□□□ 1.03
TMED5-203ENST00000370290 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
TMED5-203ENST00000370290 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
TMED5-203ENST00000370290 PABPN1Q86U42 306 aaKnown RBP eCLIP20.77■□□□□ 0.92
TMED5-203ENST00000370290 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
TMED5-203ENST00000370290 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
TMED5-203ENST00000370290 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
TMED5-203ENST00000370290 NACADO15069 1562 aa19.99■□□□□ 0.79
TMED5-203ENST00000370290 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
TMED5-203ENST00000370290 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
TMED5-203ENST00000370290 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
TMED5-203ENST00000370290 TRIM41Q8WV44 630 aa19.49■□□□□ 0.71
TMED5-203ENST00000370290 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
TMED5-203ENST00000370290 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
TMED5-203ENST00000370290 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.69
TMED5-203ENST00000370290 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
TMED5-203ENST00000370290 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
TMED5-203ENST00000370290 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
TMED5-203ENST00000370290 BAZ1AQ9NRL2 1556 aaPredicted RBP19.09■□□□□ 0.65
TMED5-203ENST00000370290 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.65
TMED5-203ENST00000370290 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
TMED5-203ENST00000370290 UBTFP17480 764 aaKnown RBP19.04■□□□□ 0.64
TMED5-203ENST00000370290 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
TMED5-203ENST00000370290 FBLN2P98095 1184 aa18.93■□□□□ 0.62
TMED5-203ENST00000370290 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
TMED5-203ENST00000370290 ATP1B4Q9UN42 357 aaPredicted RBP18.91■□□□□ 0.62
TMED5-203ENST00000370290 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
TMED5-203ENST00000370290 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
TMED5-203ENST00000370290 WIZO95785 1651 aa18.83■□□□□ 0.61
TMED5-203ENST00000370290 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
TMED5-203ENST00000370290 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
TMED5-203ENST00000370290 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
TMED5-203ENST00000370290 ERCC6Q03468 1493 aa18.76■□□□□ 0.59
TMED5-203ENST00000370290 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
TMED5-203ENST00000370290 APLP2Q06481 763 aa18.74■□□□□ 0.59
TMED5-203ENST00000370290 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
TMED5-203ENST00000370290 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
TMED5-203ENST00000370290 PPARGC1BQ86YN6 1023 aaKnown RBP18.6■□□□□ 0.57
TMED5-203ENST00000370290 NCAPD3P42695 1498 aa18.58■□□□□ 0.56
TMED5-203ENST00000370290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
TMED5-203ENST00000370290 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
TMED5-203ENST00000370290 CADPSQ9ULU8 1353 aa18.56■□□□□ 0.56
TMED5-203ENST00000370290 TOP2AP11388 1531 aaKnown RBP18.55■□□□□ 0.56
TMED5-203ENST00000370290 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
TMED5-203ENST00000370290 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
TMED5-203ENST00000370290 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
TMED5-203ENST00000370290 P3H3Q8IVL6 736 aa18.49■□□□□ 0.55
TMED5-203ENST00000370290 NESP48681 1621 aa18.44■□□□□ 0.54
TMED5-203ENST00000370290 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
TMED5-203ENST00000370290 ARID3CA6NKF2 412 aa18.42■□□□□ 0.54
TMED5-203ENST00000370290 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
TMED5-203ENST00000370290 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.52
TMED5-203ENST00000370290 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.52
TMED5-203ENST00000370290 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
TMED5-203ENST00000370290 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
TMED5-203ENST00000370290 SOGA1O94964 1423 aa18.23■□□□□ 0.51
TMED5-203ENST00000370290 CUX2O14529 1486 aa18.22■□□□□ 0.51
TMED5-203ENST00000370290 KIF27Q86VH2 1401 aa18.17■□□□□ 0.5
TMED5-203ENST00000370290 ITGAEP38570 1179 aa18.16■□□□□ 0.5
TMED5-203ENST00000370290 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
TMED5-203ENST00000370290 PCGF6Q9BYE7 350 aa18.14■□□□□ 0.49
TMED5-203ENST00000370290 CFTRP13569 1480 aa18.14■□□□□ 0.49
TMED5-203ENST00000370290 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
TMED5-203ENST00000370290 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
TMED5-203ENST00000370290 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.48
TMED5-203ENST00000370290 FGD5Q6ZNL6 1462 aa18■□□□□ 0.47
TMED5-203ENST00000370290 AQRO60306 1485 aaKnown RBP eCLIP17.98■□□□□ 0.474e-6■■■□□ 16.4
TMED5-203ENST00000370290 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
TMED5-203ENST00000370290 RUSC2Q8N2Y8 1516 aa17.95■□□□□ 0.46
TMED5-203ENST00000370290 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
TMED5-203ENST00000370290 FAM50AQ14320 339 aaKnown RBP17.9■□□□□ 0.46
TMED5-203ENST00000370290 EEA1Q15075 1411 aa17.89■□□□□ 0.46
TMED5-203ENST00000370290 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.45
TMED5-203ENST00000370290 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
TMED5-203ENST00000370290 KCNH8Q96L42 1107 aa17.86■□□□□ 0.45
TMED5-203ENST00000370290 ZNF777Q9ULD5 760 aaPredicted RBP17.86■□□□□ 0.45
TMED5-203ENST00000370290 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
TMED5-203ENST00000370290 GOLGA3Q08378 1498 aa17.83■□□□□ 0.44
TMED5-203ENST00000370290 CLIP1P30622 1438 aa17.83■□□□□ 0.44
TMED5-203ENST00000370290 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
TMED5-203ENST00000370290 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
TMED5-203ENST00000370290 CUX1P39880 1505 aa17.81■□□□□ 0.44
TMED5-203ENST00000370290 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
TMED5-203ENST00000370290 CDK11AQ9UQ88 783 aaPredicted RBP17.79■□□□□ 0.44
TMED5-203ENST00000370290 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
TMED5-203ENST00000370290 IGF1RP08069 1367 aa17.77■□□□□ 0.44
TMED5-203ENST00000370290 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.43
TMED5-203ENST00000370290 URB2Q14146 1524 aaKnown RBP17.76■□□□□ 0.43
TMED5-203ENST00000370290 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
TMED5-203ENST00000370290 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
TMED5-203ENST00000370290 RAPGEF2Q9Y4G8 1499 aa17.7■□□□□ 0.42
TMED5-203ENST00000370290 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
TMED5-203ENST00000370290 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
TMED5-203ENST00000370290 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
TMED5-203ENST00000370290 ZNF608Q9ULD9 1512 aaPredicted RBP17.68■□□□□ 0.42
TMED5-203ENST00000370290 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
TMED5-203ENST00000370290 TNIKQ9UKE5 1360 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms