RNA–Protein interactions for RNA: ENST00000369570.4

SMIM8-202, Transcript of small integral membrane protein 8, humanhuman

TSL 2

Gene SMIM8, Length 1,568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-202ENST00000369570 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
SMIM8-202ENST00000369570 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
SMIM8-202ENST00000369570 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
SMIM8-202ENST00000369570 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
SMIM8-202ENST00000369570 MYT1Q01538 1121 aa20.23■□□□□ 0.83
SMIM8-202ENST00000369570 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
SMIM8-202ENST00000369570 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
SMIM8-202ENST00000369570 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
SMIM8-202ENST00000369570 TTBK1Q5TCY1 1321 aaPredicted RBP19.71■□□□□ 0.75
SMIM8-202ENST00000369570 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
SMIM8-202ENST00000369570 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
SMIM8-202ENST00000369570 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
SMIM8-202ENST00000369570 NACADO15069 1562 aa19.17■□□□□ 0.66
SMIM8-202ENST00000369570 ABCC9O60706 1549 aa19.14■□□□□ 0.65
SMIM8-202ENST00000369570 SLC24A1O60721 1099 aa19.03■□□□□ 0.64
SMIM8-202ENST00000369570 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
SMIM8-202ENST00000369570 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
SMIM8-202ENST00000369570 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
SMIM8-202ENST00000369570 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
SMIM8-202ENST00000369570 APLP2Q06481 763 aa18.64■□□□□ 0.58
SMIM8-202ENST00000369570 PRKCSHP14314 528 aaPredicted RBP18.64■□□□□ 0.57
SMIM8-202ENST00000369570 UNC13AQ9UPW8 1703 aa18.47■□□□□ 0.55
SMIM8-202ENST00000369570 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
SMIM8-202ENST00000369570 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.52
SMIM8-202ENST00000369570 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
SMIM8-202ENST00000369570 BICRAQ9NZM4 1560 aa18.28■□□□□ 0.52
SMIM8-202ENST00000369570 MROH2BQ7Z745 1585 aa18.26■□□□□ 0.51
SMIM8-202ENST00000369570 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
SMIM8-202ENST00000369570 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
SMIM8-202ENST00000369570 SMARCA4P51532 1647 aa18.18■□□□□ 0.5
SMIM8-202ENST00000369570 WIZO95785 1651 aa18.12■□□□□ 0.49
SMIM8-202ENST00000369570 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
SMIM8-202ENST00000369570 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
SMIM8-202ENST00000369570 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.47
SMIM8-202ENST00000369570 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
SMIM8-202ENST00000369570 BCL11AQ9H165 835 aa17.87■□□□□ 0.45
SMIM8-202ENST00000369570 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
SMIM8-202ENST00000369570 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
SMIM8-202ENST00000369570 HRCP23327 699 aa17.78■□□□□ 0.44
SMIM8-202ENST00000369570 CCDC88BA6NC98 1476 aa17.77■□□□□ 0.44
SMIM8-202ENST00000369570 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
SMIM8-202ENST00000369570 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
SMIM8-202ENST00000369570 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
SMIM8-202ENST00000369570 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
SMIM8-202ENST00000369570 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
SMIM8-202ENST00000369570 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
SMIM8-202ENST00000369570 FAM9AQ8IZU1 332 aaPredicted RBP17.53■□□□□ 0.4
SMIM8-202ENST00000369570 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
SMIM8-202ENST00000369570 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
SMIM8-202ENST00000369570 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
SMIM8-202ENST00000369570 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
SMIM8-202ENST00000369570 EEA1Q15075 1411 aa17.36■□□□□ 0.37
SMIM8-202ENST00000369570 EIF5BO60841 1220 aaKnown RBP17.36■□□□□ 0.37
SMIM8-202ENST00000369570 CFTRP13569 1480 aa17.31■□□□□ 0.36
SMIM8-202ENST00000369570 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
SMIM8-202ENST00000369570 LOC105371045A0A1W2PR82 267 aa17.29■□□□□ 0.36
SMIM8-202ENST00000369570 CENPBP07199 599 aaPredicted RBP17.29■□□□□ 0.36
SMIM8-202ENST00000369570 SYNJ1O43426 1573 aa17.25■□□□□ 0.35
SMIM8-202ENST00000369570 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
SMIM8-202ENST00000369570 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
SMIM8-202ENST00000369570 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
SMIM8-202ENST00000369570 SOGA1O94964 1423 aa17.14■□□□□ 0.33
SMIM8-202ENST00000369570 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
SMIM8-202ENST00000369570 CUX1P39880 1505 aa17.08■□□□□ 0.32
SMIM8-202ENST00000369570 KIF21BO75037 1637 aa17.07■□□□□ 0.32
SMIM8-202ENST00000369570 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
SMIM8-202ENST00000369570 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
SMIM8-202ENST00000369570 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
SMIM8-202ENST00000369570 TNIKQ9UKE5 1360 aa17.03■□□□□ 0.32
SMIM8-202ENST00000369570 RUSC2Q8N2Y8 1516 aa17.03■□□□□ 0.32
SMIM8-202ENST00000369570 FOXD1Q16676 465 aa16.99■□□□□ 0.31
SMIM8-202ENST00000369570 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
SMIM8-202ENST00000369570 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
SMIM8-202ENST00000369570 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
SMIM8-202ENST00000369570 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
SMIM8-202ENST00000369570 DNMBPQ6XZF7 1577 aa16.93■□□□□ 0.3
SMIM8-202ENST00000369570 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
SMIM8-202ENST00000369570 UBE2Q2Q8WVN8 375 aa16.91■□□□□ 0.3
SMIM8-202ENST00000369570 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
SMIM8-202ENST00000369570 PRXQ9BXM0 1461 aa16.87■□□□□ 0.29
SMIM8-202ENST00000369570 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
SMIM8-202ENST00000369570 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
SMIM8-202ENST00000369570 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
SMIM8-202ENST00000369570 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
SMIM8-202ENST00000369570 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
SMIM8-202ENST00000369570 NESP48681 1621 aa16.85■□□□□ 0.29
SMIM8-202ENST00000369570 TOPBP1Q92547 1522 aa16.83■□□□□ 0.29
SMIM8-202ENST00000369570 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
SMIM8-202ENST00000369570 CUX2O14529 1486 aa16.79■□□□□ 0.28
SMIM8-202ENST00000369570 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
SMIM8-202ENST00000369570 ACIN1Q9UKV3 1341 aaKnown RBP16.78■□□□□ 0.28
SMIM8-202ENST00000369570 ABCA10Q8WWZ4 1543 aa16.78■□□□□ 0.28
SMIM8-202ENST00000369570 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
SMIM8-202ENST00000369570 ARXQ96QS3 562 aa16.75■□□□□ 0.27
SMIM8-202ENST00000369570 CLIP1P30622 1438 aa16.74■□□□□ 0.27
SMIM8-202ENST00000369570 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
SMIM8-202ENST00000369570 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
SMIM8-202ENST00000369570 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
SMIM8-202ENST00000369570 IGF1RP08069 1367 aa16.69■□□□□ 0.26
SMIM8-202ENST00000369570 CUL7Q14999 1698 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms