RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
RAB39B-201ENST00000369454 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
RAB39B-201ENST00000369454 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
RAB39B-201ENST00000369454 SUPT5HO00267 1087 aaKnown RBP20.27■□□□□ 0.84
RAB39B-201ENST00000369454 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
RAB39B-201ENST00000369454 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
RAB39B-201ENST00000369454 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
RAB39B-201ENST00000369454 DCAF1Q9Y4B6 1507 aa19.32■□□□□ 0.68
RAB39B-201ENST00000369454 MYO15BQ96JP2 1530 aa19.31■□□□□ 0.68
RAB39B-201ENST00000369454 SCRIBQ14160 1630 aa19.14■□□□□ 0.66
RAB39B-201ENST00000369454 ABCC9O60706 1549 aa19.14■□□□□ 0.65
RAB39B-201ENST00000369454 LOC105371045A0A1W2PR82 267 aa19.04■□□□□ 0.64
RAB39B-201ENST00000369454 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
RAB39B-201ENST00000369454 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
RAB39B-201ENST00000369454 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.61
RAB39B-201ENST00000369454 FAM9AQ8IZU1 332 aaPredicted RBP18.81■□□□□ 0.6
RAB39B-201ENST00000369454 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
RAB39B-201ENST00000369454 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
RAB39B-201ENST00000369454 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
RAB39B-201ENST00000369454 NACADO15069 1562 aa18.69■□□□□ 0.58
RAB39B-201ENST00000369454 HRCP23327 699 aa18.65■□□□□ 0.58
RAB39B-201ENST00000369454 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
RAB39B-201ENST00000369454 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
RAB39B-201ENST00000369454 WIZO95785 1651 aa18.49■□□□□ 0.55
RAB39B-201ENST00000369454 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
RAB39B-201ENST00000369454 TRIM26Q12899 539 aaPredicted RBP18.39■□□□□ 0.53
RAB39B-201ENST00000369454 BAZ1AQ9NRL2 1556 aaPredicted RBP18.27■□□□□ 0.52
RAB39B-201ENST00000369454 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
RAB39B-201ENST00000369454 UNC13AQ9UPW8 1703 aa18.14■□□□□ 0.5
RAB39B-201ENST00000369454 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
RAB39B-201ENST00000369454 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
RAB39B-201ENST00000369454 CCDC88BA6NC98 1476 aa18.13■□□□□ 0.49
RAB39B-201ENST00000369454 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.48
RAB39B-201ENST00000369454 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
RAB39B-201ENST00000369454 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
RAB39B-201ENST00000369454 SOGA1O94964 1423 aa17.97■□□□□ 0.47
RAB39B-201ENST00000369454 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
RAB39B-201ENST00000369454 UBTFP17480 764 aaKnown RBP17.96■□□□□ 0.47
RAB39B-201ENST00000369454 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
RAB39B-201ENST00000369454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
RAB39B-201ENST00000369454 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
RAB39B-201ENST00000369454 RANGAP1P46060 587 aaPredicted RBP17.86■□□□□ 0.45
RAB39B-201ENST00000369454 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
RAB39B-201ENST00000369454 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
RAB39B-201ENST00000369454 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
RAB39B-201ENST00000369454 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
RAB39B-201ENST00000369454 ATAD2BQ9ULI0 1458 aa17.76■□□□□ 0.43
RAB39B-201ENST00000369454 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
RAB39B-201ENST00000369454 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
RAB39B-201ENST00000369454 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
RAB39B-201ENST00000369454 PEG3Q9GZU2 1588 aa17.64■□□□□ 0.41
RAB39B-201ENST00000369454 EEA1Q15075 1411 aa17.62■□□□□ 0.41
RAB39B-201ENST00000369454 GOLGA3Q08378 1498 aa17.61■□□□□ 0.41
RAB39B-201ENST00000369454 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
RAB39B-201ENST00000369454 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
RAB39B-201ENST00000369454 APLP2Q06481 763 aa17.5■□□□□ 0.39
RAB39B-201ENST00000369454 CLIP1P30622 1438 aa17.5■□□□□ 0.39
RAB39B-201ENST00000369454 RAPGEF2Q9Y4G8 1499 aa17.49■□□□□ 0.39
RAB39B-201ENST00000369454 KIF21BO75037 1637 aa17.36■□□□□ 0.37
RAB39B-201ENST00000369454 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
RAB39B-201ENST00000369454 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
RAB39B-201ENST00000369454 VPS8Q8N3P4 1428 aa17.33■□□□□ 0.36
RAB39B-201ENST00000369454 DIEXFQ68CQ4 756 aaKnown RBP17.31■□□□□ 0.36
RAB39B-201ENST00000369454 CUX1P39880 1505 aa17.29■□□□□ 0.36
RAB39B-201ENST00000369454 HMGXB3Q12766 1538 aa17.27■□□□□ 0.35
RAB39B-201ENST00000369454 KANK4Q5T7N3 995 aaPredicted RBP17.24■□□□□ 0.35
RAB39B-201ENST00000369454 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
RAB39B-201ENST00000369454 CFTRP13569 1480 aa17.22■□□□□ 0.35
RAB39B-201ENST00000369454 ITGAEP38570 1179 aa17.21■□□□□ 0.35
RAB39B-201ENST00000369454 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
RAB39B-201ENST00000369454 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
RAB39B-201ENST00000369454 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
RAB39B-201ENST00000369454 ATP1B4Q9UN42 357 aaPredicted RBP17.16■□□□□ 0.34
RAB39B-201ENST00000369454 CUX2O14529 1486 aa17.15■□□□□ 0.34
RAB39B-201ENST00000369454 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
RAB39B-201ENST00000369454 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
RAB39B-201ENST00000369454 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
RAB39B-201ENST00000369454 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
RAB39B-201ENST00000369454 YTHDC1Q96MU7 727 aaKnown RBP17.11■□□□□ 0.33
RAB39B-201ENST00000369454 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
RAB39B-201ENST00000369454 ERICH3Q5RHP9 1530 aa17.1■□□□□ 0.33
RAB39B-201ENST00000369454 IGF1RP08069 1367 aa17.07■□□□□ 0.32
RAB39B-201ENST00000369454 CC2D2AQ9P2K1 1620 aa17.05■□□□□ 0.32
RAB39B-201ENST00000369454 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
RAB39B-201ENST00000369454 CARMIL1Q5VZK9 1371 aa17.03■□□□□ 0.32
RAB39B-201ENST00000369454 ARHGAP35Q9NRY4 1499 aa17.03■□□□□ 0.32
RAB39B-201ENST00000369454 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
RAB39B-201ENST00000369454 NESP48681 1621 aa17■□□□□ 0.31
RAB39B-201ENST00000369454 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
RAB39B-201ENST00000369454 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
RAB39B-201ENST00000369454 MIER1Q8N108 512 aa16.97■□□□□ 0.31
RAB39B-201ENST00000369454 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
RAB39B-201ENST00000369454 CENPBP07199 599 aaPredicted RBP16.96■□□□□ 0.31
RAB39B-201ENST00000369454 FAM50AQ14320 339 aaKnown RBP16.94■□□□□ 0.3
RAB39B-201ENST00000369454 GTF3C3Q9Y5Q9 886 aa16.93■□□□□ 0.3
RAB39B-201ENST00000369454 DHX57Q6P158 1386 aaKnown RBP16.92■□□□□ 0.3
RAB39B-201ENST00000369454 CCNB3Q8WWL7 1395 aa16.92■□□□□ 0.3
RAB39B-201ENST00000369454 PRDM2Q13029 1718 aa16.86■□□□□ 0.29
RAB39B-201ENST00000369454 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
RAB39B-201ENST00000369454 RRBP1Q9P2E9 1410 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms