RNA–Protein interactions for RNA: ENST00000368965.3

CCDC162P-201, Transcript of coiled-coil domain containing 162, pseudogene, humanhuman

TSL 5

Gene CCDC162P, Length 929 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162P-201ENST00000368965 NISCHQ9Y2I1 1504 aa16.67■□□□□ 0.26
CCDC162P-201ENST00000368965 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
CCDC162P-201ENST00000368965 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
CCDC162P-201ENST00000368965 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
CCDC162P-201ENST00000368965 DCAF1Q9Y4B6 1507 aa13.88□□□□□ -0.19
CCDC162P-201ENST00000368965 SHROOM4Q9ULL8 1493 aa13.78□□□□□ -0.2
CCDC162P-201ENST00000368965 ABCC9O60706 1549 aa13.69□□□□□ -0.22
CCDC162P-201ENST00000368965 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
CCDC162P-201ENST00000368965 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
CCDC162P-201ENST00000368965 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
CCDC162P-201ENST00000368965 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
CCDC162P-201ENST00000368965 NACADO15069 1562 aa13.28□□□□□ -0.28
CCDC162P-201ENST00000368965 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
CCDC162P-201ENST00000368965 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
CCDC162P-201ENST00000368965 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
CCDC162P-201ENST00000368965 RB1CC1Q8TDY2 1594 aa13.07□□□□□ -0.32
CCDC162P-201ENST00000368965 BAZ1AQ9NRL2 1556 aaPredicted RBP12.88□□□□□ -0.35
CCDC162P-201ENST00000368965 MROH2BQ7Z745 1585 aa12.84□□□□□ -0.35
CCDC162P-201ENST00000368965 HRCP23327 699 aa12.82□□□□□ -0.36
CCDC162P-201ENST00000368965 CECR2Q9BXF3 1484 aa12.82□□□□□ -0.36
CCDC162P-201ENST00000368965 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
CCDC162P-201ENST00000368965 WIZO95785 1651 aa12.78□□□□□ -0.36
CCDC162P-201ENST00000368965 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.371e-8■■■■■ 30.6
CCDC162P-201ENST00000368965 PHF23Q9BUL5 403 aaPredicted RBP12.77□□□□□ -0.37
CCDC162P-201ENST00000368965 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
CCDC162P-201ENST00000368965 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
CCDC162P-201ENST00000368965 PCGF6Q9BYE7 350 aa12.72□□□□□ -0.37
CCDC162P-201ENST00000368965 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
CCDC162P-201ENST00000368965 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
CCDC162P-201ENST00000368965 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
CCDC162P-201ENST00000368965 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
CCDC162P-201ENST00000368965 PEG3Q9GZU2 1588 aa12.59□□□□□ -0.39
CCDC162P-201ENST00000368965 ZEB1P37275 1124 aaPredicted RBP12.58□□□□□ -0.4
CCDC162P-201ENST00000368965 SMARCA2P51531 1590 aa12.58□□□□□ -0.4
CCDC162P-201ENST00000368965 CCDC88BA6NC98 1476 aa12.55□□□□□ -0.4
CCDC162P-201ENST00000368965 BICRAQ9NZM4 1560 aa12.54□□□□□ -0.4
CCDC162P-201ENST00000368965 EEA1Q15075 1411 aa12.53□□□□□ -0.4
CCDC162P-201ENST00000368965 FAM9AQ8IZU1 332 aaPredicted RBP12.47□□□□□ -0.41
CCDC162P-201ENST00000368965 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
CCDC162P-201ENST00000368965 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
CCDC162P-201ENST00000368965 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
CCDC162P-201ENST00000368965 TNIKQ9UKE5 1360 aa12.36□□□□□ -0.43
CCDC162P-201ENST00000368965 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
CCDC162P-201ENST00000368965 BAZ1BQ9UIG0 1483 aaKnown RBP12.34□□□□□ -0.43
CCDC162P-201ENST00000368965 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
CCDC162P-201ENST00000368965 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
CCDC162P-201ENST00000368965 GOLGA3Q08378 1498 aa12.31□□□□□ -0.44
CCDC162P-201ENST00000368965 KIF21BO75037 1637 aa12.29□□□□□ -0.44
CCDC162P-201ENST00000368965 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
CCDC162P-201ENST00000368965 CC2D2AQ9P2K1 1620 aa12.28□□□□□ -0.44
CCDC162P-201ENST00000368965 PPARGC1BQ86YN6 1023 aaKnown RBP12.27□□□□□ -0.45
CCDC162P-201ENST00000368965 CEP162Q5TB80 1403 aa12.27□□□□□ -0.45
CCDC162P-201ENST00000368965 SOGA1O94964 1423 aa12.26□□□□□ -0.45
CCDC162P-201ENST00000368965 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
CCDC162P-201ENST00000368965 HMGXB3Q12766 1538 aa12.26□□□□□ -0.45
CCDC162P-201ENST00000368965 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
CCDC162P-201ENST00000368965 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
CCDC162P-201ENST00000368965 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
CCDC162P-201ENST00000368965 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.46
CCDC162P-201ENST00000368965 UBTFP17480 764 aaKnown RBP12.17□□□□□ -0.46
CCDC162P-201ENST00000368965 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
CCDC162P-201ENST00000368965 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
CCDC162P-201ENST00000368965 ERICH3Q5RHP9 1530 aa12.12□□□□□ -0.47
CCDC162P-201ENST00000368965 PLPPR3Q6T4P5 718 aa12.08□□□□□ -0.48
CCDC162P-201ENST00000368965 CCER1Q8TC90 406 aaPredicted RBP12.08□□□□□ -0.48
CCDC162P-201ENST00000368965 CLIP1P30622 1438 aa12.08□□□□□ -0.48
CCDC162P-201ENST00000368965 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
CCDC162P-201ENST00000368965 CFTRP13569 1480 aa12.06□□□□□ -0.48
CCDC162P-201ENST00000368965 APLP2Q06481 763 aa12.03□□□□□ -0.48
CCDC162P-201ENST00000368965 PRXQ9BXM0 1461 aa12.02□□□□□ -0.48
CCDC162P-201ENST00000368965 KIF27Q86VH2 1401 aa12.01□□□□□ -0.49
CCDC162P-201ENST00000368965 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
CCDC162P-201ENST00000368965 CUX1P39880 1505 aa11.98□□□□□ -0.49
CCDC162P-201ENST00000368965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
CCDC162P-201ENST00000368965 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
CCDC162P-201ENST00000368965 CLSPNQ9HAW4 1339 aa11.89□□□□□ -0.51
CCDC162P-201ENST00000368965 ERCC6Q03468 1493 aa11.89□□□□□ -0.51
CCDC162P-201ENST00000368965 MAP3K1Q13233 1512 aa11.87□□□□□ -0.51
CCDC162P-201ENST00000368965 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
CCDC162P-201ENST00000368965 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
CCDC162P-201ENST00000368965 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
CCDC162P-201ENST00000368965 KCNA4P22459 653 aa11.82□□□□□ -0.52
CCDC162P-201ENST00000368965 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
CCDC162P-201ENST00000368965 CUX2O14529 1486 aa11.82□□□□□ -0.52
CCDC162P-201ENST00000368965 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
CCDC162P-201ENST00000368965 RRBP1Q9P2E9 1410 aaKnown RBP11.8□□□□□ -0.52
CCDC162P-201ENST00000368965 IGF1RP08069 1367 aa11.79□□□□□ -0.52
CCDC162P-201ENST00000368965 FGD5Q6ZNL6 1462 aa11.79□□□□□ -0.52
CCDC162P-201ENST00000368965 ARHGAP35Q9NRY4 1499 aa11.78□□□□□ -0.52
CCDC162P-201ENST00000368965 CENPBP07199 599 aaPredicted RBP11.78□□□□□ -0.52
CCDC162P-201ENST00000368965 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
CCDC162P-201ENST00000368965 CUL7Q14999 1698 aa11.77□□□□□ -0.53
CCDC162P-201ENST00000368965 CARMIL1Q5VZK9 1371 aa11.77□□□□□ -0.53
CCDC162P-201ENST00000368965 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.53
CCDC162P-201ENST00000368965 FANCD2Q9BXW9 1451 aa11.76□□□□□ -0.53
CCDC162P-201ENST00000368965 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
CCDC162P-201ENST00000368965 ABCA10Q8WWZ4 1543 aa11.75□□□□□ -0.53
CCDC162P-201ENST00000368965 EFCAB5A4FU69 1503 aa11.74□□□□□ -0.53
CCDC162P-201ENST00000368965 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
CCDC162P-201ENST00000368965 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms