RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 NISCHQ9Y2I1 1504 aa3.7□□□□□ -1.82
RNU1-42P-201ENST00000364033 ABCC9O60706 1549 aa3.45□□□□□ -1.86
RNU1-42P-201ENST00000364033 DNAJC5Q9H3Z4 198 aa3.43□□□□□ -1.86
RNU1-42P-201ENST00000364033 DCAF8L2P0C7V8 631 aa3.37□□□□□ -1.87
RNU1-42P-201ENST00000364033 DNAJC5BQ9UF47 199 aa3.35□□□□□ -1.87
RNU1-42P-201ENST00000364033 PABPN1Q86U42 306 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU1-42P-201ENST00000364033 CCDC180Q9P1Z9 1646 aa3.22□□□□□ -1.89
RNU1-42P-201ENST00000364033 RB1CC1Q8TDY2 1594 aa3.16□□□□□ -1.9
RNU1-42P-201ENST00000364033 NACADO15069 1562 aa3.12□□□□□ -1.91
RNU1-42P-201ENST00000364033 AEBP2Q6ZN18 517 aaPredicted RBP3.09□□□□□ -1.91
RNU1-42P-201ENST00000364033 TRIM41Q8WV44 630 aa3.08□□□□□ -1.92
RNU1-42P-201ENST00000364033 CECR2Q9BXF3 1484 aa3.08□□□□□ -1.92
RNU1-42P-201ENST00000364033 BICRAQ9NZM4 1560 aa3.08□□□□□ -1.92
RNU1-42P-201ENST00000364033 SCRIBQ14160 1630 aa3.06□□□□□ -1.92
RNU1-42P-201ENST00000364033 ILDR1Q86SU0 546 aaPredicted RBP3.06□□□□□ -1.92
RNU1-42P-201ENST00000364033 UNC13AQ9UPW8 1703 aa3.05□□□□□ -1.92
RNU1-42P-201ENST00000364033 CC2D2AQ9P2K1 1620 aa3.04□□□□□ -1.92
RNU1-42P-201ENST00000364033 SHROOM4Q9ULL8 1493 aa3.03□□□□□ -1.92
RNU1-42P-201ENST00000364033 ZCCHC6Q5VYS8 1495 aaKnown RBP3.03□□□□□ -1.93
RNU1-42P-201ENST00000364033 EIF4G1Q04637 1599 aaKnown RBP3.01□□□□□ -1.93
RNU1-42P-201ENST00000364033 MYO15BQ96JP2 1530 aa3.01□□□□□ -1.93
RNU1-42P-201ENST00000364033 DCAF1Q9Y4B6 1507 aa2.97□□□□□ -1.93
RNU1-42P-201ENST00000364033 ERCC6Q03468 1493 aa2.96□□□□□ -1.94
RNU1-42P-201ENST00000364033 NESP48681 1621 aa2.95□□□□□ -1.94
RNU1-42P-201ENST00000364033 ATAD2BQ9ULI0 1458 aa2.92□□□□□ -1.94
RNU1-42P-201ENST00000364033 NCAPD3P42695 1498 aa2.91□□□□□ -1.94
RNU1-42P-201ENST00000364033 MROH2BQ7Z745 1585 aa2.89□□□□□ -1.95
RNU1-42P-201ENST00000364033 CUX2O14529 1486 aa2.89□□□□□ -1.95
RNU1-42P-201ENST00000364033 BAZ1BQ9UIG0 1483 aaKnown RBP2.89□□□□□ -1.95
RNU1-42P-201ENST00000364033 OSCARQ8IYS5 282 aa2.88□□□□□ -1.95
RNU1-42P-201ENST00000364033 SMARCA2P51531 1590 aa2.87□□□□□ -1.95
RNU1-42P-201ENST00000364033 SOCS7O14512 581 aa2.87□□□□□ -1.95
RNU1-42P-201ENST00000364033 FBLN2P98095 1184 aa2.87□□□□□ -1.95
RNU1-42P-201ENST00000364033 CADPSQ9ULU8 1353 aa2.87□□□□□ -1.95
RNU1-42P-201ENST00000364033 SMARCA4P51532 1647 aa2.86□□□□□ -1.95
RNU1-42P-201ENST00000364033 PDS5BQ9NTI5 1447 aa2.86□□□□□ -1.95
RNU1-42P-201ENST00000364033 CYB5RLQ6IPT4 315 aa2.86□□□□□ -1.95
RNU1-42P-201ENST00000364033 TRHP20396 242 aaPredicted RBP2.85□□□□□ -1.95
RNU1-42P-201ENST00000364033 BAZ1AQ9NRL2 1556 aaPredicted RBP2.84□□□□□ -1.95
RNU1-42P-201ENST00000364033 WIZO95785 1651 aa2.84□□□□□ -1.95
RNU1-42P-201ENST00000364033 LMTK3Q96Q04 1460 aa2.84□□□□□ -1.96
RNU1-42P-201ENST00000364033 RSF1Q96T23 1441 aaPredicted RBP2.83□□□□□ -1.96
RNU1-42P-201ENST00000364033 HMGXB3Q12766 1538 aa2.83□□□□□ -1.96
RNU1-42P-201ENST00000364033 SUPT5HO00267 1087 aaKnown RBP2.82□□□□□ -1.96
RNU1-42P-201ENST00000364033 FANCD2Q9BXW9 1451 aa2.82□□□□□ -1.96
RNU1-42P-201ENST00000364033 MRC2Q9UBG0 1479 aa2.82□□□□□ -1.96
RNU1-42P-201ENST00000364033 THOC2Q8NI27 1593 aaKnown RBP2.81□□□□□ -1.96
RNU1-42P-201ENST00000364033 LAMC3Q9Y6N6 1575 aa2.81□□□□□ -1.96
RNU1-42P-201ENST00000364033 KIF21AQ7Z4S6 1674 aa2.81□□□□□ -1.96
RNU1-42P-201ENST00000364033 ZNF608Q9ULD9 1512 aaPredicted RBP2.8□□□□□ -1.96
RNU1-42P-201ENST00000364033 AQRO60306 1485 aaKnown RBP eCLIP2.8□□□□□ -1.96
RNU1-42P-201ENST00000364033 CEP164Q9UPV0 1460 aa2.8□□□□□ -1.96
RNU1-42P-201ENST00000364033 TDRD9Q8NDG6 1382 aaKnown RBP2.8□□□□□ -1.96
RNU1-42P-201ENST00000364033 URB2Q14146 1524 aaKnown RBP2.79□□□□□ -1.96
RNU1-42P-201ENST00000364033 CCDC88BA6NC98 1476 aa2.79□□□□□ -1.96
RNU1-42P-201ENST00000364033 CFTRP13569 1480 aa2.79□□□□□ -1.96
RNU1-42P-201ENST00000364033 ILDR2Q71H61 639 aa2.79□□□□□ -1.96
RNU1-42P-201ENST00000364033 CHMP7Q8WUX9 453 aaPredicted RBP2.79□□□□□ -1.96
RNU1-42P-201ENST00000364033 PEG3Q9GZU2 1588 aa2.78□□□□□ -1.96
RNU1-42P-201ENST00000364033 TTBK1Q5TCY1 1321 aaPredicted RBP2.78□□□□□ -1.96
RNU1-42P-201ENST00000364033 WDR62O43379 1518 aa2.78□□□□□ -1.97
RNU1-42P-201ENST00000364033 RAD54L2Q9Y4B4 1467 aa2.77□□□□□ -1.97
RNU1-42P-201ENST00000364033 SOGA1O94964 1423 aa2.76□□□□□ -1.97
RNU1-42P-201ENST00000364033 TOP2AP11388 1531 aaKnown RBP2.75□□□□□ -1.97
RNU1-42P-201ENST00000364033 TOPBP1Q92547 1522 aa2.75□□□□□ -1.97
RNU1-42P-201ENST00000364033 FBXO41Q8TF61 875 aa2.75□□□□□ -1.97
RNU1-42P-201ENST00000364033 IFT140Q96RY7 1462 aa2.75□□□□□ -1.97
RNU1-42P-201ENST00000364033 RIMBP3CA6NJZ7 1639 aa2.75□□□□□ -1.97
RNU1-42P-201ENST00000364033 RIMBP3BA6NNM3 1639 aa2.75□□□□□ -1.97
RNU1-42P-201ENST00000364033 RIMBP3Q9UFD9 1639 aa2.75□□□□□ -1.97
RNU1-42P-201ENST00000364033 ARHGEF11O15085 1522 aa2.74□□□□□ -1.97
RNU1-42P-201ENST00000364033 POLA1P09884 1462 aaPredicted RBP2.72□□□□□ -1.97
RNU1-42P-201ENST00000364033 SNAPC4Q5SXM2 1469 aa2.72□□□□□ -1.97
RNU1-42P-201ENST00000364033 ARAP1Q96P48 1450 aa2.72□□□□□ -1.97
RNU1-42P-201ENST00000364033 DISP3Q9P2K9 1392 aa2.72□□□□□ -1.97
RNU1-42P-201ENST00000364033 NPM1P06748 294 aaKnown RBP eCLIP2.71□□□□□ -1.98
RNU1-42P-201ENST00000364033 FAM69CQ0P6D2 419 aa2.71□□□□□ -1.98
RNU1-42P-201ENST00000364033 JPH4Q96JJ6 628 aa2.71□□□□□ -1.98
RNU1-42P-201ENST00000364033 FGD5Q6ZNL6 1462 aa2.71□□□□□ -1.98
RNU1-42P-201ENST00000364033 ABCC8Q09428 1581 aa2.7□□□□□ -1.98
RNU1-42P-201ENST00000364033 EIF4G3O43432 1585 aaKnown RBP2.7□□□□□ -1.98
RNU1-42P-201ENST00000364033 DNMBPQ6XZF7 1577 aa2.7□□□□□ -1.98
RNU1-42P-201ENST00000364033 CUX1P39880 1505 aa2.69□□□□□ -1.98
RNU1-42P-201ENST00000364033 TARBP1Q13395 1621 aaKnown RBP2.69□□□□□ -1.98
RNU1-42P-201ENST00000364033 ARID3CA6NKF2 412 aa2.69□□□□□ -1.98
RNU1-42P-201ENST00000364033 RANGAP1P46060 587 aaPredicted RBP2.69□□□□□ -1.98
RNU1-42P-201ENST00000364033 EHMT2Q96KQ7 1210 aa2.69□□□□□ -1.98
RNU1-42P-201ENST00000364033 GRIN2BQ13224 1484 aa2.69□□□□□ -1.98
RNU1-42P-201ENST00000364033 GAPVD1Q14C86 1478 aa2.69□□□□□ -1.98
RNU1-42P-201ENST00000364033 ERCC6L2Q5T890 1561 aa2.69□□□□□ -1.98
RNU1-42P-201ENST00000364033 CHD1O14646 1710 aa2.68□□□□□ -1.98
RNU1-42P-201ENST00000364033 PRG4Q92954 1404 aaPredicted RBP2.68□□□□□ -1.98
RNU1-42P-201ENST00000364033 SYNJ2O15056 1496 aa2.67□□□□□ -1.98
RNU1-42P-201ENST00000364033 KDM4FA0A1W2PPD8 638 aa2.67□□□□□ -1.98
RNU1-42P-201ENST00000364033 P3H3Q8IVL6 736 aa2.67□□□□□ -1.98
RNU1-42P-201ENST00000364033 KCNH8Q96L42 1107 aa2.67□□□□□ -1.98
RNU1-42P-201ENST00000364033 WRNQ14191 1432 aaPredicted RBP eCLIP2.67□□□□□ -1.98
RNU1-42P-201ENST00000364033 PLPPR3Q6T4P5 718 aa2.66□□□□□ -1.98
RNU1-42P-201ENST00000364033 SYNJ1O43426 1573 aa2.66□□□□□ -1.98
RNU1-42P-201ENST00000364033 MAGI1Q96QZ7 1491 aaPredicted RBP2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms