RNA–Protein interactions for RNA: ENST00000363838.1

RN7SKP93-201, Transcript of RNA, 7SK small nuclear pseudogene 93, humanhuman

BASIC

Gene RN7SKP93, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP93-201ENST00000363838 NISCHQ9Y2I1 1504 aa19.74■□□□□ 0.75
RN7SKP93-201ENST00000363838 ABCC9O60706 1549 aa17.24■□□□□ 0.35
RN7SKP93-201ENST00000363838 CCDC180Q9P1Z9 1646 aa17.14■□□□□ 0.33
RN7SKP93-201ENST00000363838 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
RN7SKP93-201ENST00000363838 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
RN7SKP93-201ENST00000363838 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
RN7SKP93-201ENST00000363838 NACADO15069 1562 aa16.3■□□□□ 0.2
RN7SKP93-201ENST00000363838 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.2
RN7SKP93-201ENST00000363838 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
RN7SKP93-201ENST00000363838 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
RN7SKP93-201ENST00000363838 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
RN7SKP93-201ENST00000363838 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
RN7SKP93-201ENST00000363838 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
RN7SKP93-201ENST00000363838 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
RN7SKP93-201ENST00000363838 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
RN7SKP93-201ENST00000363838 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
RN7SKP93-201ENST00000363838 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
RN7SKP93-201ENST00000363838 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
RN7SKP93-201ENST00000363838 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
RN7SKP93-201ENST00000363838 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
RN7SKP93-201ENST00000363838 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
RN7SKP93-201ENST00000363838 MROH2BQ7Z745 1585 aa15.22■□□□□ 0.03
RN7SKP93-201ENST00000363838 CHIC1Q5VXU3 224 aa15.15■□□□□ 0.02
RN7SKP93-201ENST00000363838 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
RN7SKP93-201ENST00000363838 NCAPD3P42695 1498 aa15.08■□□□□ 0.01
RN7SKP93-201ENST00000363838 WIZO95785 1651 aa15.06■□□□□ 0
RN7SKP93-201ENST00000363838 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
RN7SKP93-201ENST00000363838 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
RN7SKP93-201ENST00000363838 DNAJC5Q9H3Z4 198 aa14.97□□□□□ -0.01
RN7SKP93-201ENST00000363838 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
RN7SKP93-201ENST00000363838 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
RN7SKP93-201ENST00000363838 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
RN7SKP93-201ENST00000363838 CUX2O14529 1486 aa14.92□□□□□ -0.02
RN7SKP93-201ENST00000363838 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
RN7SKP93-201ENST00000363838 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
RN7SKP93-201ENST00000363838 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
RN7SKP93-201ENST00000363838 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
RN7SKP93-201ENST00000363838 NESP48681 1621 aa14.77□□□□□ -0.04
RN7SKP93-201ENST00000363838 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
RN7SKP93-201ENST00000363838 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
RN7SKP93-201ENST00000363838 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
RN7SKP93-201ENST00000363838 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
RN7SKP93-201ENST00000363838 LOC105371045A0A1W2PR82 267 aa14.55□□□□□ -0.08
RN7SKP93-201ENST00000363838 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
RN7SKP93-201ENST00000363838 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
RN7SKP93-201ENST00000363838 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
RN7SKP93-201ENST00000363838 FAM9AQ8IZU1 332 aaPredicted RBP14.49□□□□□ -0.09
RN7SKP93-201ENST00000363838 KIF21AQ7Z4S6 1674 aa14.48□□□□□ -0.09
RN7SKP93-201ENST00000363838 WDR62O43379 1518 aa14.46□□□□□ -0.09
RN7SKP93-201ENST00000363838 CFTRP13569 1480 aa14.44□□□□□ -0.1
RN7SKP93-201ENST00000363838 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
RN7SKP93-201ENST00000363838 EEA1Q15075 1411 aa14.44□□□□□ -0.1
RN7SKP93-201ENST00000363838 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
RN7SKP93-201ENST00000363838 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
RN7SKP93-201ENST00000363838 SOGA1O94964 1423 aa14.34□□□□□ -0.11
RN7SKP93-201ENST00000363838 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
RN7SKP93-201ENST00000363838 TOP2BQ02880 1626 aa14.32□□□□□ -0.12
RN7SKP93-201ENST00000363838 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
RN7SKP93-201ENST00000363838 BIVM-ERCC5R4GMW8 1640 aa14.27□□□□□ -0.12
RN7SKP93-201ENST00000363838 OSCARQ8IYS5 282 aa14.26□□□□□ -0.13
RN7SKP93-201ENST00000363838 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
RN7SKP93-201ENST00000363838 RUSC2Q8N2Y8 1516 aa14.24□□□□□ -0.13
RN7SKP93-201ENST00000363838 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
RN7SKP93-201ENST00000363838 CUX1P39880 1505 aa14.23□□□□□ -0.13
RN7SKP93-201ENST00000363838 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
RN7SKP93-201ENST00000363838 GOLGA3Q08378 1498 aa14.21□□□□□ -0.13
RN7SKP93-201ENST00000363838 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
RN7SKP93-201ENST00000363838 KIF21BO75037 1637 aa14.16□□□□□ -0.14
RN7SKP93-201ENST00000363838 UBTFP17480 764 aaKnown RBP14.16□□□□□ -0.14
RN7SKP93-201ENST00000363838 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
RN7SKP93-201ENST00000363838 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
RN7SKP93-201ENST00000363838 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
RN7SKP93-201ENST00000363838 ZNF608Q9ULD9 1512 aaPredicted RBP14.11□□□□□ -0.15
RN7SKP93-201ENST00000363838 CEP162Q5TB80 1403 aa14.11□□□□□ -0.15
RN7SKP93-201ENST00000363838 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
RN7SKP93-201ENST00000363838 DNMBPQ6XZF7 1577 aa14.07□□□□□ -0.16
RN7SKP93-201ENST00000363838 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
RN7SKP93-201ENST00000363838 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
RN7SKP93-201ENST00000363838 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
RN7SKP93-201ENST00000363838 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
RN7SKP93-201ENST00000363838 AQRO60306 1485 aaKnown RBP eCLIP14□□□□□ -0.17
RN7SKP93-201ENST00000363838 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
RN7SKP93-201ENST00000363838 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
RN7SKP93-201ENST00000363838 CLIP1P30622 1438 aa13.98□□□□□ -0.17
RN7SKP93-201ENST00000363838 IGF1RP08069 1367 aa13.98□□□□□ -0.17
RN7SKP93-201ENST00000363838 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
RN7SKP93-201ENST00000363838 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
RN7SKP93-201ENST00000363838 ABCA10Q8WWZ4 1543 aa13.96□□□□□ -0.17
RN7SKP93-201ENST00000363838 RIMBP3CA6NJZ7 1639 aa13.95□□□□□ -0.18
RN7SKP93-201ENST00000363838 RIMBP3BA6NNM3 1639 aa13.95□□□□□ -0.18
RN7SKP93-201ENST00000363838 RIMBP3Q9UFD9 1639 aa13.95□□□□□ -0.18
RN7SKP93-201ENST00000363838 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
RN7SKP93-201ENST00000363838 FBLN2P98095 1184 aa13.93□□□□□ -0.18
RN7SKP93-201ENST00000363838 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
RN7SKP93-201ENST00000363838 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
RN7SKP93-201ENST00000363838 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
RN7SKP93-201ENST00000363838 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
RN7SKP93-201ENST00000363838 HRCP23327 699 aa13.87□□□□□ -0.19
RN7SKP93-201ENST00000363838 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
RN7SKP93-201ENST00000363838 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 205.5 ms