RNA–Protein interactions for RNA: ENST00000363838.1

RN7SKP93-201, Transcript of RNA, 7SK small nuclear pseudogene 93, humanhuman

BASIC

Gene RN7SKP93, Length 309 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP93-201ENST00000363838 NISCHQ9Y2I1 1504 aa19.74■□□□□ 0.75
RN7SKP93-201ENST00000363838 ABCC9O60706 1549 aa17.24■□□□□ 0.35
RN7SKP93-201ENST00000363838 CCDC180Q9P1Z9 1646 aa17.14■□□□□ 0.33
RN7SKP93-201ENST00000363838 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
RN7SKP93-201ENST00000363838 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
RN7SKP93-201ENST00000363838 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
RN7SKP93-201ENST00000363838 NACADO15069 1562 aa16.3■□□□□ 0.2
RN7SKP93-201ENST00000363838 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.2
RN7SKP93-201ENST00000363838 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
RN7SKP93-201ENST00000363838 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
RN7SKP93-201ENST00000363838 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
RN7SKP93-201ENST00000363838 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
RN7SKP93-201ENST00000363838 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
RN7SKP93-201ENST00000363838 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
RN7SKP93-201ENST00000363838 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
RN7SKP93-201ENST00000363838 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
RN7SKP93-201ENST00000363838 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
RN7SKP93-201ENST00000363838 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
RN7SKP93-201ENST00000363838 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
RN7SKP93-201ENST00000363838 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
RN7SKP93-201ENST00000363838 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
RN7SKP93-201ENST00000363838 MROH2BQ7Z745 1585 aa15.22■□□□□ 0.03
RN7SKP93-201ENST00000363838 CHIC1Q5VXU3 224 aa15.15■□□□□ 0.02
RN7SKP93-201ENST00000363838 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
RN7SKP93-201ENST00000363838 NCAPD3P42695 1498 aa15.08■□□□□ 0.01
RN7SKP93-201ENST00000363838 WIZO95785 1651 aa15.06■□□□□ 0
RN7SKP93-201ENST00000363838 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
RN7SKP93-201ENST00000363838 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
RN7SKP93-201ENST00000363838 DNAJC5Q9H3Z4 198 aa14.97□□□□□ -0.01
RN7SKP93-201ENST00000363838 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
RN7SKP93-201ENST00000363838 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
RN7SKP93-201ENST00000363838 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
RN7SKP93-201ENST00000363838 CUX2O14529 1486 aa14.92□□□□□ -0.02
RN7SKP93-201ENST00000363838 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
RN7SKP93-201ENST00000363838 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
RN7SKP93-201ENST00000363838 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
RN7SKP93-201ENST00000363838 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
RN7SKP93-201ENST00000363838 NESP48681 1621 aa14.77□□□□□ -0.04
RN7SKP93-201ENST00000363838 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
RN7SKP93-201ENST00000363838 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
RN7SKP93-201ENST00000363838 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
RN7SKP93-201ENST00000363838 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
RN7SKP93-201ENST00000363838 LOC105371045A0A1W2PR82 267 aa14.55□□□□□ -0.08
RN7SKP93-201ENST00000363838 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
RN7SKP93-201ENST00000363838 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
RN7SKP93-201ENST00000363838 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
RN7SKP93-201ENST00000363838 FAM9AQ8IZU1 332 aaPredicted RBP14.49□□□□□ -0.09
RN7SKP93-201ENST00000363838 KIF21AQ7Z4S6 1674 aa14.48□□□□□ -0.09
RN7SKP93-201ENST00000363838 WDR62O43379 1518 aa14.46□□□□□ -0.09
RN7SKP93-201ENST00000363838 CFTRP13569 1480 aa14.44□□□□□ -0.1
RN7SKP93-201ENST00000363838 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
RN7SKP93-201ENST00000363838 EEA1Q15075 1411 aa14.44□□□□□ -0.1
RN7SKP93-201ENST00000363838 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
RN7SKP93-201ENST00000363838 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
RN7SKP93-201ENST00000363838 SOGA1O94964 1423 aa14.34□□□□□ -0.11
RN7SKP93-201ENST00000363838 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
RN7SKP93-201ENST00000363838 TOP2BQ02880 1626 aa14.32□□□□□ -0.12
RN7SKP93-201ENST00000363838 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
RN7SKP93-201ENST00000363838 BIVM-ERCC5R4GMW8 1640 aa14.27□□□□□ -0.12
RN7SKP93-201ENST00000363838 OSCARQ8IYS5 282 aa14.26□□□□□ -0.13
RN7SKP93-201ENST00000363838 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
RN7SKP93-201ENST00000363838 RUSC2Q8N2Y8 1516 aa14.24□□□□□ -0.13
RN7SKP93-201ENST00000363838 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
RN7SKP93-201ENST00000363838 CUX1P39880 1505 aa14.23□□□□□ -0.13
RN7SKP93-201ENST00000363838 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
RN7SKP93-201ENST00000363838 GOLGA3Q08378 1498 aa14.21□□□□□ -0.13
RN7SKP93-201ENST00000363838 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
RN7SKP93-201ENST00000363838 KIF21BO75037 1637 aa14.16□□□□□ -0.14
RN7SKP93-201ENST00000363838 UBTFP17480 764 aaKnown RBP14.16□□□□□ -0.14
RN7SKP93-201ENST00000363838 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
RN7SKP93-201ENST00000363838 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
RN7SKP93-201ENST00000363838 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
RN7SKP93-201ENST00000363838 ZNF608Q9ULD9 1512 aaPredicted RBP14.11□□□□□ -0.15
RN7SKP93-201ENST00000363838 CEP162Q5TB80 1403 aa14.11□□□□□ -0.15
RN7SKP93-201ENST00000363838 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
RN7SKP93-201ENST00000363838 DNMBPQ6XZF7 1577 aa14.07□□□□□ -0.16
RN7SKP93-201ENST00000363838 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
RN7SKP93-201ENST00000363838 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
RN7SKP93-201ENST00000363838 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
RN7SKP93-201ENST00000363838 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
RN7SKP93-201ENST00000363838 AQRO60306 1485 aaKnown RBP eCLIP14□□□□□ -0.17
RN7SKP93-201ENST00000363838 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
RN7SKP93-201ENST00000363838 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
RN7SKP93-201ENST00000363838 CLIP1P30622 1438 aa13.98□□□□□ -0.17
RN7SKP93-201ENST00000363838 IGF1RP08069 1367 aa13.98□□□□□ -0.17
RN7SKP93-201ENST00000363838 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
RN7SKP93-201ENST00000363838 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
RN7SKP93-201ENST00000363838 ABCA10Q8WWZ4 1543 aa13.96□□□□□ -0.17
RN7SKP93-201ENST00000363838 RIMBP3CA6NJZ7 1639 aa13.95□□□□□ -0.18
RN7SKP93-201ENST00000363838 RIMBP3BA6NNM3 1639 aa13.95□□□□□ -0.18
RN7SKP93-201ENST00000363838 RIMBP3Q9UFD9 1639 aa13.95□□□□□ -0.18
RN7SKP93-201ENST00000363838 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
RN7SKP93-201ENST00000363838 FBLN2P98095 1184 aa13.93□□□□□ -0.18
RN7SKP93-201ENST00000363838 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
RN7SKP93-201ENST00000363838 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
RN7SKP93-201ENST00000363838 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
RN7SKP93-201ENST00000363838 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
RN7SKP93-201ENST00000363838 HRCP23327 699 aa13.87□□□□□ -0.19
RN7SKP93-201ENST00000363838 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
RN7SKP93-201ENST00000363838 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms