RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 NISCHQ9Y2I1 1504 aa24.08■■□□□ 1.44
HIST4H4-201ENST00000358064 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.21
HIST4H4-201ENST00000358064 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
HIST4H4-201ENST00000358064 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
HIST4H4-201ENST00000358064 ABCC9O60706 1549 aa20.89■□□□□ 0.93
HIST4H4-201ENST00000358064 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
HIST4H4-201ENST00000358064 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
HIST4H4-201ENST00000358064 SLC24A1O60721 1099 aa20.08■□□□□ 0.8
HIST4H4-201ENST00000358064 RB1CC1Q8TDY2 1594 aa20.07■□□□□ 0.8
HIST4H4-201ENST00000358064 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
HIST4H4-201ENST00000358064 NACADO15069 1562 aa20.05■□□□□ 0.8
HIST4H4-201ENST00000358064 EHMT2Q96KQ7 1210 aa20■□□□□ 0.79
HIST4H4-201ENST00000358064 MYO15BQ96JP2 1530 aa19.93■□□□□ 0.78
HIST4H4-201ENST00000358064 DCAF1Q9Y4B6 1507 aa19.89■□□□□ 0.77
HIST4H4-201ENST00000358064 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
HIST4H4-201ENST00000358064 PABPN1Q86U42 306 aaKnown RBP eCLIP19.57■□□□□ 0.72
HIST4H4-201ENST00000358064 SCRIBQ14160 1630 aa19.53■□□□□ 0.72
HIST4H4-201ENST00000358064 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
HIST4H4-201ENST00000358064 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
HIST4H4-201ENST00000358064 PLPPR3Q6T4P5 718 aa19.15■□□□□ 0.66
HIST4H4-201ENST00000358064 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
HIST4H4-201ENST00000358064 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
HIST4H4-201ENST00000358064 KCNA4P22459 653 aa18.94■□□□□ 0.62
HIST4H4-201ENST00000358064 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
HIST4H4-201ENST00000358064 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
HIST4H4-201ENST00000358064 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
HIST4H4-201ENST00000358064 RTN4Q9NQC3 1192 aaKnown RBP18.75■□□□□ 0.59
HIST4H4-201ENST00000358064 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
HIST4H4-201ENST00000358064 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
HIST4H4-201ENST00000358064 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.56
HIST4H4-201ENST00000358064 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
HIST4H4-201ENST00000358064 AMER1Q5JTC6 1135 aaPredicted RBP18.54■□□□□ 0.56
HIST4H4-201ENST00000358064 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
HIST4H4-201ENST00000358064 NCAPD3P42695 1498 aa18.52■□□□□ 0.56
HIST4H4-201ENST00000358064 PELP1Q8IZL8 1130 aaKnown RBP18.48■□□□□ 0.55
HIST4H4-201ENST00000358064 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
HIST4H4-201ENST00000358064 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
HIST4H4-201ENST00000358064 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
HIST4H4-201ENST00000358064 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
HIST4H4-201ENST00000358064 WIZO95785 1651 aa18.38■□□□□ 0.53
HIST4H4-201ENST00000358064 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.53
HIST4H4-201ENST00000358064 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
HIST4H4-201ENST00000358064 MYT1Q01538 1121 aa18.18■□□□□ 0.5
HIST4H4-201ENST00000358064 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
HIST4H4-201ENST00000358064 NESP48681 1621 aa18.1■□□□□ 0.49
HIST4H4-201ENST00000358064 ADRA2BP18089 450 aa18.06■□□□□ 0.48
HIST4H4-201ENST00000358064 CADPSQ9ULU8 1353 aa18.01■□□□□ 0.47
HIST4H4-201ENST00000358064 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
HIST4H4-201ENST00000358064 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
HIST4H4-201ENST00000358064 NCBP3Q53F19 620 aaKnown RBP18■□□□□ 0.47
HIST4H4-201ENST00000358064 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
HIST4H4-201ENST00000358064 PDS5BQ9NTI5 1447 aa17.92■□□□□ 0.46
HIST4H4-201ENST00000358064 CFTRP13569 1480 aa17.9■□□□□ 0.46
HIST4H4-201ENST00000358064 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
HIST4H4-201ENST00000358064 FANCD2Q9BXW9 1451 aa17.81■□□□□ 0.44
HIST4H4-201ENST00000358064 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
HIST4H4-201ENST00000358064 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
HIST4H4-201ENST00000358064 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
HIST4H4-201ENST00000358064 CUX2O14529 1486 aa17.73■□□□□ 0.43
HIST4H4-201ENST00000358064 MRC2Q9UBG0 1479 aa17.71■□□□□ 0.43
HIST4H4-201ENST00000358064 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
HIST4H4-201ENST00000358064 HRCP23327 699 aa17.64■□□□□ 0.42
HIST4H4-201ENST00000358064 WDR62O43379 1518 aa17.64■□□□□ 0.41
HIST4H4-201ENST00000358064 URB2Q14146 1524 aaKnown RBP17.61■□□□□ 0.41
HIST4H4-201ENST00000358064 ZBTB22O15209 634 aa17.53■□□□□ 0.4
HIST4H4-201ENST00000358064 TOPBP1Q92547 1522 aa17.52■□□□□ 0.4
HIST4H4-201ENST00000358064 DAXXQ9UER7 740 aaPredicted RBP17.52■□□□□ 0.4
HIST4H4-201ENST00000358064 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
HIST4H4-201ENST00000358064 PRKCSHP14314 528 aaPredicted RBP17.49■□□□□ 0.39
HIST4H4-201ENST00000358064 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
HIST4H4-201ENST00000358064 CUX1P39880 1505 aa17.42■□□□□ 0.38
HIST4H4-201ENST00000358064 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
HIST4H4-201ENST00000358064 IFT140Q96RY7 1462 aa17.38■□□□□ 0.37
HIST4H4-201ENST00000358064 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
HIST4H4-201ENST00000358064 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
HIST4H4-201ENST00000358064 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
HIST4H4-201ENST00000358064 SOGA1O94964 1423 aa17.33■□□□□ 0.37
HIST4H4-201ENST00000358064 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.36
HIST4H4-201ENST00000358064 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
HIST4H4-201ENST00000358064 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
HIST4H4-201ENST00000358064 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
HIST4H4-201ENST00000358064 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
HIST4H4-201ENST00000358064 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
HIST4H4-201ENST00000358064 TRIM41Q8WV44 630 aa17.27■□□□□ 0.35
HIST4H4-201ENST00000358064 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
HIST4H4-201ENST00000358064 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.35
HIST4H4-201ENST00000358064 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
HIST4H4-201ENST00000358064 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
HIST4H4-201ENST00000358064 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
HIST4H4-201ENST00000358064 PPP4R3CPQ6ZMV5 832 aa17.17■□□□□ 0.34
HIST4H4-201ENST00000358064 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
HIST4H4-201ENST00000358064 WDR97A6NE52 1622 aa17.14■□□□□ 0.34
HIST4H4-201ENST00000358064 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
HIST4H4-201ENST00000358064 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
HIST4H4-201ENST00000358064 BCANQ96GW7 911 aa17.11■□□□□ 0.33
HIST4H4-201ENST00000358064 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
HIST4H4-201ENST00000358064 FBLN2P98095 1184 aa17.09■□□□□ 0.33
HIST4H4-201ENST00000358064 ABCA5Q8WWZ7 1642 aa17.08■□□□□ 0.32
HIST4H4-201ENST00000358064 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
HIST4H4-201ENST00000358064 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms