RNA–Protein interactions for RNA: ENST00000357874.3

MDM1-202, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-202ENST00000357874 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
MDM1-202ENST00000357874 NISCHQ9Y2I1 1504 aa18.81■□□□□ 0.6
MDM1-202ENST00000357874 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
MDM1-202ENST00000357874 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
MDM1-202ENST00000357874 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
MDM1-202ENST00000357874 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
MDM1-202ENST00000357874 ABCC9O60706 1549 aa16.35■□□□□ 0.21
MDM1-202ENST00000357874 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
MDM1-202ENST00000357874 FOXD1Q16676 465 aa15.76■□□□□ 0.11
MDM1-202ENST00000357874 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
MDM1-202ENST00000357874 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
MDM1-202ENST00000357874 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
MDM1-202ENST00000357874 SHROOM4Q9ULL8 1493 aa15.39■□□□□ 0.05
MDM1-202ENST00000357874 RB1CC1Q8TDY2 1594 aa15.38■□□□□ 0.05
MDM1-202ENST00000357874 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
MDM1-202ENST00000357874 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
MDM1-202ENST00000357874 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
MDM1-202ENST00000357874 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
MDM1-202ENST00000357874 NACADO15069 1562 aa15.11■□□□□ 0.01
MDM1-202ENST00000357874 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
MDM1-202ENST00000357874 MSH5O43196 834 aa14.95□□□□□ -0.02
MDM1-202ENST00000357874 SCRIBQ14160 1630 aa14.9□□□□□ -0.02
MDM1-202ENST00000357874 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
MDM1-202ENST00000357874 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
MDM1-202ENST00000357874 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
MDM1-202ENST00000357874 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
MDM1-202ENST00000357874 DNAJC5Q9H3Z4 198 aa14.59□□□□□ -0.07
MDM1-202ENST00000357874 EIF4G1Q04637 1599 aaKnown RBP14.59□□□□□ -0.07
MDM1-202ENST00000357874 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
MDM1-202ENST00000357874 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
MDM1-202ENST00000357874 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
MDM1-202ENST00000357874 SMARCA4P51532 1647 aa14.4□□□□□ -0.1
MDM1-202ENST00000357874 WIZO95785 1651 aa14.39□□□□□ -0.11
MDM1-202ENST00000357874 TOP2AP11388 1531 aaKnown RBP14.35□□□□□ -0.11
MDM1-202ENST00000357874 PEG3Q9GZU2 1588 aa14.27□□□□□ -0.12
MDM1-202ENST00000357874 PPP6R1Q9UPN7 881 aa14.27□□□□□ -0.13
MDM1-202ENST00000357874 ERCC6Q03468 1493 aa14.2□□□□□ -0.14
MDM1-202ENST00000357874 CUX2O14529 1486 aa14.19□□□□□ -0.14
MDM1-202ENST00000357874 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
MDM1-202ENST00000357874 SMARCA2P51531 1590 aa14.18□□□□□ -0.14
MDM1-202ENST00000357874 ADRA2BP18089 450 aa14.18□□□□□ -0.14
MDM1-202ENST00000357874 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
MDM1-202ENST00000357874 PLPPR3Q6T4P5 718 aa14.1□□□□□ -0.15
MDM1-202ENST00000357874 ATAD2BQ9ULI0 1458 aa14.02□□□□□ -0.16
MDM1-202ENST00000357874 LOC105371045A0A1W2PR82 267 aa14.01□□□□□ -0.17
MDM1-202ENST00000357874 EEA1Q15075 1411 aa13.98□□□□□ -0.17
MDM1-202ENST00000357874 BAZ1BQ9UIG0 1483 aaKnown RBP13.97□□□□□ -0.17
MDM1-202ENST00000357874 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
MDM1-202ENST00000357874 NESP48681 1621 aa13.9□□□□□ -0.18
MDM1-202ENST00000357874 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
MDM1-202ENST00000357874 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
MDM1-202ENST00000357874 HRCP23327 699 aa13.86□□□□□ -0.19
MDM1-202ENST00000357874 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
MDM1-202ENST00000357874 THOC2Q8NI27 1593 aaKnown RBP13.84□□□□□ -0.19
MDM1-202ENST00000357874 WRNQ14191 1432 aaPredicted RBP eCLIP13.84□□□□□ -0.19
MDM1-202ENST00000357874 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.2
MDM1-202ENST00000357874 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
MDM1-202ENST00000357874 FAM9AQ8IZU1 332 aaPredicted RBP13.8□□□□□ -0.2
MDM1-202ENST00000357874 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
MDM1-202ENST00000357874 BIVM-ERCC5R4GMW8 1640 aa13.75□□□□□ -0.21
MDM1-202ENST00000357874 TNIKQ9UKE5 1360 aa13.75□□□□□ -0.21
MDM1-202ENST00000357874 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
MDM1-202ENST00000357874 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
MDM1-202ENST00000357874 KIF21BO75037 1637 aa13.74□□□□□ -0.21
MDM1-202ENST00000357874 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
MDM1-202ENST00000357874 GOLGA3Q08378 1498 aa13.73□□□□□ -0.21
MDM1-202ENST00000357874 SOGA1O94964 1423 aa13.71□□□□□ -0.22
MDM1-202ENST00000357874 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
MDM1-202ENST00000357874 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
MDM1-202ENST00000357874 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
MDM1-202ENST00000357874 CFTRP13569 1480 aa13.66□□□□□ -0.22
MDM1-202ENST00000357874 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
MDM1-202ENST00000357874 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
MDM1-202ENST00000357874 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
MDM1-202ENST00000357874 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
MDM1-202ENST00000357874 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
MDM1-202ENST00000357874 CUX1P39880 1505 aa13.54□□□□□ -0.24
MDM1-202ENST00000357874 WDR62O43379 1518 aa13.53□□□□□ -0.24
MDM1-202ENST00000357874 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
MDM1-202ENST00000357874 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
MDM1-202ENST00000357874 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
MDM1-202ENST00000357874 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
MDM1-202ENST00000357874 KIF27Q86VH2 1401 aa13.48□□□□□ -0.25
MDM1-202ENST00000357874 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
MDM1-202ENST00000357874 CLIP1P30622 1438 aa13.47□□□□□ -0.25
MDM1-202ENST00000357874 RAPGEF2Q9Y4G8 1499 aa13.45□□□□□ -0.26
MDM1-202ENST00000357874 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
MDM1-202ENST00000357874 RIMBP3CA6NJZ7 1639 aa13.43□□□□□ -0.26
MDM1-202ENST00000357874 RIMBP3BA6NNM3 1639 aa13.43□□□□□ -0.26
MDM1-202ENST00000357874 RIMBP3Q9UFD9 1639 aa13.43□□□□□ -0.26
MDM1-202ENST00000357874 FANCD2Q9BXW9 1451 aa13.39□□□□□ -0.27
MDM1-202ENST00000357874 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
MDM1-202ENST00000357874 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
MDM1-202ENST00000357874 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.28
MDM1-202ENST00000357874 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
MDM1-202ENST00000357874 APLP2Q06481 763 aa13.29□□□□□ -0.28
MDM1-202ENST00000357874 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
MDM1-202ENST00000357874 PPARGC1BQ86YN6 1023 aaKnown RBP13.28□□□□□ -0.28
MDM1-202ENST00000357874 URB2Q14146 1524 aaKnown RBP13.28□□□□□ -0.28
MDM1-202ENST00000357874 CUL7Q14999 1698 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms