RNA–Protein interactions for RNA: ENST00000344850.8

GTDC1-202, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-202ENST00000344850 CHIC1Q5VXU3 224 aa11.46□□□□□ -0.58
GTDC1-202ENST00000344850 AEBP2Q6ZN18 517 aaPredicted RBP10.93□□□□□ -0.66
GTDC1-202ENST00000344850 NISCHQ9Y2I1 1504 aa10.75□□□□□ -0.69
GTDC1-202ENST00000344850 PHF23Q9BUL5 403 aaPredicted RBP10.16□□□□□ -0.78
GTDC1-202ENST00000344850 CCDC180Q9P1Z9 1646 aa10.02□□□□□ -0.8
GTDC1-202ENST00000344850 ABCC9O60706 1549 aa9.8□□□□□ -0.84
GTDC1-202ENST00000344850 PLPPR3Q6T4P5 718 aa9.64□□□□□ -0.87
GTDC1-202ENST00000344850 EHMT2Q96KQ7 1210 aa9.61□□□□□ -0.87
GTDC1-202ENST00000344850 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
GTDC1-202ENST00000344850 NACADO15069 1562 aa9.47□□□□□ -0.89
GTDC1-202ENST00000344850 MYO15BQ96JP2 1530 aa9.44□□□□□ -0.9
GTDC1-202ENST00000344850 SHROOM4Q9ULL8 1493 aa9.43□□□□□ -0.9
GTDC1-202ENST00000344850 DNAJC5BQ9UF47 199 aa9.41□□□□□ -0.9
GTDC1-202ENST00000344850 SLC24A1O60721 1099 aa9.36□□□□□ -0.91
GTDC1-202ENST00000344850 KCNA4P22459 653 aa9.28□□□□□ -0.92
GTDC1-202ENST00000344850 UNC13AQ9UPW8 1703 aa9.25□□□□□ -0.93
GTDC1-202ENST00000344850 BICRAQ9NZM4 1560 aa9.22□□□□□ -0.93
GTDC1-202ENST00000344850 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
GTDC1-202ENST00000344850 SENP3Q9H4L4 574 aaPredicted RBP9.15□□□□□ -0.94
GTDC1-202ENST00000344850 DCAF1Q9Y4B6 1507 aa9.13□□□□□ -0.95
GTDC1-202ENST00000344850 POTEDQ86YR6 584 aa9.09□□□□□ -0.95
GTDC1-202ENST00000344850 DNAJC5Q9H3Z4 198 aa9.09□□□□□ -0.95
GTDC1-202ENST00000344850 CC2D2AQ9P2K1 1620 aa9.03□□□□□ -0.96
GTDC1-202ENST00000344850 CECR2Q9BXF3 1484 aa9.01□□□□□ -0.97
GTDC1-202ENST00000344850 ADRA2BP18089 450 aa8.99□□□□□ -0.97
GTDC1-202ENST00000344850 SLC4A1APQ9BWU0 796 aaKnown RBP8.99□□□□□ -0.97
GTDC1-202ENST00000344850 EIF4G1Q04637 1599 aaKnown RBP8.98□□□□□ -0.97
GTDC1-202ENST00000344850 CUX2O14529 1486 aa8.96□□□□□ -0.97
GTDC1-202ENST00000344850 PABPN1Q86U42 306 aaKnown RBP eCLIP8.91□□□□□ -0.98
GTDC1-202ENST00000344850 AMER1Q5JTC6 1135 aaPredicted RBP8.89□□□□□ -0.99
GTDC1-202ENST00000344850 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
GTDC1-202ENST00000344850 ZCCHC6Q5VYS8 1495 aaKnown RBP8.88□□□□□ -0.99
GTDC1-202ENST00000344850 SCRIBQ14160 1630 aa8.69□□□□□ -1.02
GTDC1-202ENST00000344850 NCAPD3P42695 1498 aa8.69□□□□□ -1.02
GTDC1-202ENST00000344850 PPP6R1Q9UPN7 881 aa8.69□□□□□ -1.02
GTDC1-202ENST00000344850 HMGXB3Q12766 1538 aa8.66□□□□□ -1.02
GTDC1-202ENST00000344850 NCBP3Q53F19 620 aaKnown RBP8.61□□□□□ -1.03
GTDC1-202ENST00000344850 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
GTDC1-202ENST00000344850 THOC2Q8NI27 1593 aaKnown RBP8.6□□□□□ -1.03
GTDC1-202ENST00000344850 SMARCA2P51531 1590 aa8.58□□□□□ -1.04
GTDC1-202ENST00000344850 ZBTB22O15209 634 aa8.57□□□□□ -1.04
GTDC1-202ENST00000344850 PEG3Q9GZU2 1588 aa8.57□□□□□ -1.04
GTDC1-202ENST00000344850 LAMC3Q9Y6N6 1575 aa8.56□□□□□ -1.04
GTDC1-202ENST00000344850 DCAF8L2P0C7V8 631 aa8.56□□□□□ -1.04
GTDC1-202ENST00000344850 ERCC6Q03468 1493 aa8.55□□□□□ -1.04
GTDC1-202ENST00000344850 ATAD2BQ9ULI0 1458 aa8.51□□□□□ -1.05
GTDC1-202ENST00000344850 NPM3O75607 178 aaKnown RBP8.48□□□□□ -1.05
GTDC1-202ENST00000344850 SMARCA4P51532 1647 aa8.45□□□□□ -1.06
GTDC1-202ENST00000344850 WDR62O43379 1518 aa8.45□□□□□ -1.06
GTDC1-202ENST00000344850 PDS5BQ9NTI5 1447 aa8.43□□□□□ -1.06
GTDC1-202ENST00000344850 BAZ1AQ9NRL2 1556 aaPredicted RBP8.4□□□□□ -1.06
GTDC1-202ENST00000344850 FOXD1Q16676 465 aa8.39□□□□□ -1.07
GTDC1-202ENST00000344850 MRC2Q9UBG0 1479 aa8.38□□□□□ -1.07
GTDC1-202ENST00000344850 KIF21AQ7Z4S6 1674 aa8.38□□□□□ -1.07
GTDC1-202ENST00000344850 BAZ1BQ9UIG0 1483 aaKnown RBP8.36□□□□□ -1.07
GTDC1-202ENST00000344850 NESP48681 1621 aa8.33□□□□□ -1.08
GTDC1-202ENST00000344850 FOXD4L1Q9NU39 408 aa8.33□□□□□ -1.08
GTDC1-202ENST00000344850 CADPSQ9ULU8 1353 aa8.29□□□□□ -1.08
GTDC1-202ENST00000344850 RIMBP3CA6NJZ7 1639 aa8.24□□□□□ -1.09
GTDC1-202ENST00000344850 RIMBP3BA6NNM3 1639 aa8.24□□□□□ -1.09
GTDC1-202ENST00000344850 RIMBP3Q9UFD9 1639 aa8.24□□□□□ -1.09
GTDC1-202ENST00000344850 PRDM2Q13029 1718 aa8.24□□□□□ -1.09
GTDC1-202ENST00000344850 CEP164Q9UPV0 1460 aa8.22□□□□□ -1.09
GTDC1-202ENST00000344850 FKBP8Q14318 412 aa8.22□□□□□ -1.09
GTDC1-202ENST00000344850 OSCARQ8IYS5 282 aa8.22□□□□□ -1.09
GTDC1-202ENST00000344850 WDR97A6NE52 1622 aa8.21□□□□□ -1.09
GTDC1-202ENST00000344850 CFTRP13569 1480 aa8.19□□□□□ -1.1
GTDC1-202ENST00000344850 CNKSR2Q8WXI2 1034 aa8.19□□□□□ -1.1
GTDC1-202ENST00000344850 TRIM41Q8WV44 630 aa8.18□□□□□ -1.1
GTDC1-202ENST00000344850 RSF1Q96T23 1441 aaPredicted RBP8.18□□□□□ -1.1
GTDC1-202ENST00000344850 IFT140Q96RY7 1462 aa8.17□□□□□ -1.1
GTDC1-202ENST00000344850 ARHGEF11O15085 1522 aa8.16□□□□□ -1.1
GTDC1-202ENST00000344850 PRKCSHP14314 528 aaPredicted RBP8.16□□□□□ -1.1
GTDC1-202ENST00000344850 ABCC8Q09428 1581 aa8.15□□□□□ -1.1
GTDC1-202ENST00000344850 FANCD2Q9BXW9 1451 aa8.15□□□□□ -1.1
GTDC1-202ENST00000344850 PLCB2Q00722 1185 aa8.15□□□□□ -1.1
GTDC1-202ENST00000344850 BCANQ96GW7 911 aa8.15□□□□□ -1.11
GTDC1-202ENST00000344850 MROH2BQ7Z745 1585 aa8.14□□□□□ -1.11
GTDC1-202ENST00000344850 URB2Q14146 1524 aaKnown RBP8.11□□□□□ -1.11
GTDC1-202ENST00000344850 PIAS4Q8N2W9 510 aaPredicted RBP8.1□□□□□ -1.11
GTDC1-202ENST00000344850 TAOK2Q9UL54 1235 aa8.1□□□□□ -1.11
GTDC1-202ENST00000344850 TOP2AP11388 1531 aaKnown RBP8.07□□□□□ -1.12
GTDC1-202ENST00000344850 CLASP1Q7Z460 1538 aa8.05□□□□□ -1.12
GTDC1-202ENST00000344850 ARAP1Q96P48 1450 aa8.05□□□□□ -1.12
GTDC1-202ENST00000344850 DAXXQ9UER7 740 aaPredicted RBP8.03□□□□□ -1.12
GTDC1-202ENST00000344850 EIF4G3O43432 1585 aaKnown RBP8.03□□□□□ -1.12
GTDC1-202ENST00000344850 DNMBPQ6XZF7 1577 aa8.03□□□□□ -1.12
GTDC1-202ENST00000344850 HAP1P54257 671 aaPredicted RBP8.03□□□□□ -1.12
GTDC1-202ENST00000344850 TARBP1Q13395 1621 aaKnown RBP8.03□□□□□ -1.12
GTDC1-202ENST00000344850 CHD1O14646 1710 aa8.02□□□□□ -1.13
GTDC1-202ENST00000344850 WIZO95785 1651 aa8□□□□□ -1.13
GTDC1-202ENST00000344850 TOPBP1Q92547 1522 aa8□□□□□ -1.13
GTDC1-202ENST00000344850 ATXN8OSP0DMR3 200 aa7.99□□□□□ -1.13
GTDC1-202ENST00000344850 SCAF1Q9H7N4 1312 aaKnown RBP7.99□□□□□ -1.13
GTDC1-202ENST00000344850 SYNJ1O43426 1573 aa7.97□□□□□ -1.13
GTDC1-202ENST00000344850 MAGI1Q96QZ7 1491 aaPredicted RBP7.96□□□□□ -1.14
GTDC1-202ENST00000344850 VSIG10Q8N0Z9 540 aa7.96□□□□□ -1.14
GTDC1-202ENST00000344850 ZNF608Q9ULD9 1512 aaPredicted RBP7.95□□□□□ -1.14
GTDC1-202ENST00000344850 TPRNQ4KMQ1 711 aa7.95□□□□□ -1.14
GTDC1-202ENST00000344850 ARXQ96QS3 562 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms