RNA–Protein interactions for RNA: ENST00000332914.10

LMO3-203, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 549 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-203ENST00000332914 AEBP2Q6ZN18 517 aaPredicted RBP32.77■■■□□ 2.84
LMO3-203ENST00000332914 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
LMO3-203ENST00000332914 SENP3Q9H4L4 574 aaPredicted RBP27.85■■■□□ 2.05
LMO3-203ENST00000332914 PHF23Q9BUL5 403 aaPredicted RBP27.62■■■□□ 2.01
LMO3-203ENST00000332914 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
LMO3-203ENST00000332914 FOXD1Q16676 465 aa25.94■■□□□ 1.74
LMO3-203ENST00000332914 PLPPR3Q6T4P5 718 aa25.27■■□□□ 1.64
LMO3-203ENST00000332914 PPP6R1Q9UPN7 881 aa24.56■■□□□ 1.52
LMO3-203ENST00000332914 ADRA2BP18089 450 aa24.49■■□□□ 1.51
LMO3-203ENST00000332914 PIAS4Q8N2W9 510 aaPredicted RBP24.34■■□□□ 1.49
LMO3-203ENST00000332914 ABCC9O60706 1549 aa24.21■■□□□ 1.47
LMO3-203ENST00000332914 MSH5O43196 834 aa24.1■■□□□ 1.45
LMO3-203ENST00000332914 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
LMO3-203ENST00000332914 CCDC180Q9P1Z9 1646 aa23.63■■□□□ 1.37
LMO3-203ENST00000332914 POTEDQ86YR6 584 aa22.94■■□□□ 1.26
LMO3-203ENST00000332914 DNAJC5Q9H3Z4 198 aa22.58■■□□□ 1.21
LMO3-203ENST00000332914 RB1CC1Q8TDY2 1594 aa22.48■■□□□ 1.19
LMO3-203ENST00000332914 MAPK8IP2Q13387 824 aaPredicted RBP22.39■■□□□ 1.17
LMO3-203ENST00000332914 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
LMO3-203ENST00000332914 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
LMO3-203ENST00000332914 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
LMO3-203ENST00000332914 NACADO15069 1562 aa22.28■■□□□ 1.16
LMO3-203ENST00000332914 PPP4R3CPQ6ZMV5 832 aa22.22■■□□□ 1.15
LMO3-203ENST00000332914 DMRT2Q9Y5R5 561 aa22.15■■□□□ 1.14
LMO3-203ENST00000332914 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
LMO3-203ENST00000332914 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
LMO3-203ENST00000332914 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
LMO3-203ENST00000332914 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
LMO3-203ENST00000332914 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
LMO3-203ENST00000332914 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
LMO3-203ENST00000332914 CNKSR2Q8WXI2 1034 aa21.7■■□□□ 1.06
LMO3-203ENST00000332914 SCRIBQ14160 1630 aa21.66■■□□□ 1.06
LMO3-203ENST00000332914 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
LMO3-203ENST00000332914 HOXD11P31277 338 aaPredicted RBP21.48■■□□□ 1.03
LMO3-203ENST00000332914 EIF4G1Q04637 1599 aaKnown RBP21.46■■□□□ 1.03
LMO3-203ENST00000332914 NCBP3Q53F19 620 aaKnown RBP21.43■■□□□ 1.02
LMO3-203ENST00000332914 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
LMO3-203ENST00000332914 RNF216Q9NWF9 866 aaPredicted RBP21.41■■□□□ 1.02
LMO3-203ENST00000332914 CUX2O14529 1486 aa21.28■■□□□ 1
LMO3-203ENST00000332914 DCAF8L1A6NGE4 600 aa21.24■□□□□ 0.99
LMO3-203ENST00000332914 NPM3O75607 178 aaKnown RBP21.17■□□□□ 0.98
LMO3-203ENST00000332914 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
LMO3-203ENST00000332914 KCNA4P22459 653 aa21.11■□□□□ 0.97
LMO3-203ENST00000332914 ERCC6Q03468 1493 aa20.96■□□□□ 0.95
LMO3-203ENST00000332914 RNF39Q9H2S5 420 aa20.63■□□□□ 0.89
LMO3-203ENST00000332914 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
LMO3-203ENST00000332914 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
LMO3-203ENST00000332914 NCAPD3P42695 1498 aa20.54■□□□□ 0.88
LMO3-203ENST00000332914 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
LMO3-203ENST00000332914 NESP48681 1621 aa20.49■□□□□ 0.87
LMO3-203ENST00000332914 CACNB1Q02641 598 aaPredicted RBP20.48■□□□□ 0.87
LMO3-203ENST00000332914 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
LMO3-203ENST00000332914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
LMO3-203ENST00000332914 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
LMO3-203ENST00000332914 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
LMO3-203ENST00000332914 BAZ1BQ9UIG0 1483 aaKnown RBP20.37■□□□□ 0.85
LMO3-203ENST00000332914 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
LMO3-203ENST00000332914 C1QBPQ07021 282 aaKnown RBP20.32■□□□□ 0.84
LMO3-203ENST00000332914 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
LMO3-203ENST00000332914 WIZO95785 1651 aa20.18■□□□□ 0.82
LMO3-203ENST00000332914 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
LMO3-203ENST00000332914 SLC4A2P04920 1241 aa20.14■□□□□ 0.81
LMO3-203ENST00000332914 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
LMO3-203ENST00000332914 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
LMO3-203ENST00000332914 U3KPZ7 1027 aaPredicted RBP20.1■□□□□ 0.81
LMO3-203ENST00000332914 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
LMO3-203ENST00000332914 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
LMO3-203ENST00000332914 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
LMO3-203ENST00000332914 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
LMO3-203ENST00000332914 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
LMO3-203ENST00000332914 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
LMO3-203ENST00000332914 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
LMO3-203ENST00000332914 WDR62O43379 1518 aa19.92■□□□□ 0.78
LMO3-203ENST00000332914 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
LMO3-203ENST00000332914 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.77
LMO3-203ENST00000332914 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
LMO3-203ENST00000332914 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
LMO3-203ENST00000332914 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
LMO3-203ENST00000332914 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
LMO3-203ENST00000332914 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
LMO3-203ENST00000332914 CFTRP13569 1480 aa19.73■□□□□ 0.75
LMO3-203ENST00000332914 SPINK5Q9NQ38 1064 aaPredicted RBP19.71■□□□□ 0.75
LMO3-203ENST00000332914 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
LMO3-203ENST00000332914 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
LMO3-203ENST00000332914 CAPN15O75808 1086 aa19.64■□□□□ 0.73
LMO3-203ENST00000332914 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
LMO3-203ENST00000332914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
LMO3-203ENST00000332914 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
LMO3-203ENST00000332914 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
LMO3-203ENST00000332914 MYCNP04198 464 aaPredicted RBP19.56■□□□□ 0.72
LMO3-203ENST00000332914 FOXD4L1Q9NU39 408 aa19.56■□□□□ 0.72
LMO3-203ENST00000332914 ILDR1Q86SU0 546 aaPredicted RBP19.54■□□□□ 0.72
LMO3-203ENST00000332914 SAMD1Q6SPF0 538 aaPredicted RBP19.52■□□□□ 0.72
LMO3-203ENST00000332914 APLP2Q06481 763 aa19.5■□□□□ 0.71
LMO3-203ENST00000332914 ZBTB22O15209 634 aa19.44■□□□□ 0.7
LMO3-203ENST00000332914 DSG3P32926 999 aa19.44■□□□□ 0.7
LMO3-203ENST00000332914 TOPBP1Q92547 1522 aa19.42■□□□□ 0.7
LMO3-203ENST00000332914 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
LMO3-203ENST00000332914 ZNF219Q9P2Y4 722 aaPredicted RBP19.37■□□□□ 0.69
LMO3-203ENST00000332914 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms