RNA–Protein interactions for RNA: ENST00000322569.8

MMP19-201, Transcript of matrix metallopeptidase 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP19, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-201ENST00000322569 NISCHQ9Y2I1 1504 aa22.45■■□□□ 1.18
MMP19-201ENST00000322569 CCDC180Q9P1Z9 1646 aa19.79■□□□□ 0.76
MMP19-201ENST00000322569 ABCC9O60706 1549 aa19.31■□□□□ 0.68
MMP19-201ENST00000322569 ZCCHC6Q5VYS8 1495 aaKnown RBP18.83■□□□□ 0.6
MMP19-201ENST00000322569 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
MMP19-201ENST00000322569 NACADO15069 1562 aa18.62■□□□□ 0.57
MMP19-201ENST00000322569 DCAF8L2P0C7V8 631 aa18.61■□□□□ 0.57
MMP19-201ENST00000322569 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
MMP19-201ENST00000322569 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
MMP19-201ENST00000322569 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
MMP19-201ENST00000322569 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
MMP19-201ENST00000322569 BICRAQ9NZM4 1560 aa18.07■□□□□ 0.48
MMP19-201ENST00000322569 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
MMP19-201ENST00000322569 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
MMP19-201ENST00000322569 HRCP23327 699 aa17.98■□□□□ 0.47
MMP19-201ENST00000322569 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
MMP19-201ENST00000322569 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
MMP19-201ENST00000322569 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
MMP19-201ENST00000322569 PCGF6Q9BYE7 350 aa17.63■□□□□ 0.41
MMP19-201ENST00000322569 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
MMP19-201ENST00000322569 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
MMP19-201ENST00000322569 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
MMP19-201ENST00000322569 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
MMP19-201ENST00000322569 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
MMP19-201ENST00000322569 MROH2BQ7Z745 1585 aa17.34■□□□□ 0.37
MMP19-201ENST00000322569 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
MMP19-201ENST00000322569 SMARCA4P51532 1647 aa17.25■□□□□ 0.35
MMP19-201ENST00000322569 LOC105371045A0A1W2PR82 267 aa17.23■□□□□ 0.35
MMP19-201ENST00000322569 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
MMP19-201ENST00000322569 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
MMP19-201ENST00000322569 WIZO95785 1651 aa17.18■□□□□ 0.34
MMP19-201ENST00000322569 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
MMP19-201ENST00000322569 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
MMP19-201ENST00000322569 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
MMP19-201ENST00000322569 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
MMP19-201ENST00000322569 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
MMP19-201ENST00000322569 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
MMP19-201ENST00000322569 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
MMP19-201ENST00000322569 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
MMP19-201ENST00000322569 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
MMP19-201ENST00000322569 CCDC88BA6NC98 1476 aa16.85■□□□□ 0.29
MMP19-201ENST00000322569 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
MMP19-201ENST00000322569 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
MMP19-201ENST00000322569 NESP48681 1621 aa16.69■□□□□ 0.26
MMP19-201ENST00000322569 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
MMP19-201ENST00000322569 CADPSQ9ULU8 1353 aa16.65■□□□□ 0.26
MMP19-201ENST00000322569 CUX2O14529 1486 aa16.6■□□□□ 0.25
MMP19-201ENST00000322569 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
MMP19-201ENST00000322569 FAM9AQ8IZU1 332 aaPredicted RBP16.6■□□□□ 0.25
MMP19-201ENST00000322569 CFTRP13569 1480 aa16.54■□□□□ 0.24
MMP19-201ENST00000322569 ACIN1Q9UKV3 1341 aaKnown RBP16.53■□□□□ 0.24
MMP19-201ENST00000322569 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.23
MMP19-201ENST00000322569 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
MMP19-201ENST00000322569 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
MMP19-201ENST00000322569 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
MMP19-201ENST00000322569 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
MMP19-201ENST00000322569 FANCD2Q9BXW9 1451 aa16.43■□□□□ 0.22
MMP19-201ENST00000322569 MRC2Q9UBG0 1479 aa16.43■□□□□ 0.22
MMP19-201ENST00000322569 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
MMP19-201ENST00000322569 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
MMP19-201ENST00000322569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.41■□□□□ 0.22
MMP19-201ENST00000322569 WDR62O43379 1518 aa16.39■□□□□ 0.22
MMP19-201ENST00000322569 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.21
MMP19-201ENST00000322569 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
MMP19-201ENST00000322569 GTF3C3Q9Y5Q9 886 aa16.34■□□□□ 0.21
MMP19-201ENST00000322569 MYT1Q01538 1121 aa16.33■□□□□ 0.2
MMP19-201ENST00000322569 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
MMP19-201ENST00000322569 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
MMP19-201ENST00000322569 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
MMP19-201ENST00000322569 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
MMP19-201ENST00000322569 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
MMP19-201ENST00000322569 BIVM-ERCC5R4GMW8 1640 aa16.21■□□□□ 0.19
MMP19-201ENST00000322569 CUX1P39880 1505 aa16.21■□□□□ 0.19
MMP19-201ENST00000322569 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
MMP19-201ENST00000322569 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
MMP19-201ENST00000322569 SOGA1O94964 1423 aa16.16■□□□□ 0.18
MMP19-201ENST00000322569 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
MMP19-201ENST00000322569 EEA1Q15075 1411 aa16.11■□□□□ 0.17
MMP19-201ENST00000322569 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
MMP19-201ENST00000322569 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
MMP19-201ENST00000322569 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
MMP19-201ENST00000322569 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
MMP19-201ENST00000322569 CEP162Q5TB80 1403 aa16.06■□□□□ 0.16
MMP19-201ENST00000322569 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
MMP19-201ENST00000322569 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
MMP19-201ENST00000322569 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.16
MMP19-201ENST00000322569 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
MMP19-201ENST00000322569 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
MMP19-201ENST00000322569 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
MMP19-201ENST00000322569 KIF27Q86VH2 1401 aa15.98■□□□□ 0.15
MMP19-201ENST00000322569 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
MMP19-201ENST00000322569 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
MMP19-201ENST00000322569 MIER1Q8N108 512 aa15.94■□□□□ 0.14
MMP19-201ENST00000322569 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
MMP19-201ENST00000322569 EIF4G3O43432 1585 aaKnown RBP15.93■□□□□ 0.14
MMP19-201ENST00000322569 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
MMP19-201ENST00000322569 GOLGA3Q08378 1498 aa15.89■□□□□ 0.13
MMP19-201ENST00000322569 KIF21BO75037 1637 aa15.88■□□□□ 0.13
MMP19-201ENST00000322569 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.13
MMP19-201ENST00000322569 IGF1RP08069 1367 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms