RNA–Protein interactions for RNA: ENST00000312777.9

TCHP-201, Transcript of trichoplein keratin filament binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCHP, Length 3,151 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-201ENST00000312777 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
TCHP-201ENST00000312777 CCDC180Q9P1Z9 1646 aa20.7■□□□□ 0.9
TCHP-201ENST00000312777 ZCCHC6Q5VYS8 1495 aaKnown RBP19.91■□□□□ 0.78
TCHP-201ENST00000312777 DCAF1Q9Y4B6 1507 aa19.7■□□□□ 0.74
TCHP-201ENST00000312777 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
TCHP-201ENST00000312777 NACADO15069 1562 aa19.07■□□□□ 0.64
TCHP-201ENST00000312777 SHROOM4Q9ULL8 1493 aa18.91■□□□□ 0.62
TCHP-201ENST00000312777 ABCC9O60706 1549 aa18.89■□□□□ 0.61
TCHP-201ENST00000312777 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
TCHP-201ENST00000312777 DCAF8L2P0C7V8 631 aa18.74■□□□□ 0.59
TCHP-201ENST00000312777 HRCP23327 699 aa18.74■□□□□ 0.59
TCHP-201ENST00000312777 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
TCHP-201ENST00000312777 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
TCHP-201ENST00000312777 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
TCHP-201ENST00000312777 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
TCHP-201ENST00000312777 PCGF6Q9BYE7 350 aa18.56■□□□□ 0.56
TCHP-201ENST00000312777 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
TCHP-201ENST00000312777 RSF1Q96T23 1441 aaPredicted RBP18.27■□□□□ 0.52
TCHP-201ENST00000312777 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
TCHP-201ENST00000312777 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
TCHP-201ENST00000312777 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
TCHP-201ENST00000312777 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
TCHP-201ENST00000312777 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
TCHP-201ENST00000312777 WIZO95785 1651 aa18.07■□□□□ 0.48
TCHP-201ENST00000312777 PELP1Q8IZL8 1130 aaKnown RBP18.05■□□□□ 0.48
TCHP-201ENST00000312777 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
TCHP-201ENST00000312777 EIF4G1Q04637 1599 aaKnown RBP17.95■□□□□ 0.46
TCHP-201ENST00000312777 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
TCHP-201ENST00000312777 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
TCHP-201ENST00000312777 LOC105371045A0A1W2PR82 267 aa17.87■□□□□ 0.45
TCHP-201ENST00000312777 SMARCA2P51531 1590 aa17.78■□□□□ 0.44
TCHP-201ENST00000312777 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
TCHP-201ENST00000312777 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
TCHP-201ENST00000312777 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
TCHP-201ENST00000312777 TRIM26Q12899 539 aaPredicted RBP17.64■□□□□ 0.41
TCHP-201ENST00000312777 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
TCHP-201ENST00000312777 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
TCHP-201ENST00000312777 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
TCHP-201ENST00000312777 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
TCHP-201ENST00000312777 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
TCHP-201ENST00000312777 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
TCHP-201ENST00000312777 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
TCHP-201ENST00000312777 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
TCHP-201ENST00000312777 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
TCHP-201ENST00000312777 CC2D2AQ9P2K1 1620 aa17.35■□□□□ 0.37
TCHP-201ENST00000312777 MYT1Q01538 1121 aa17.28■□□□□ 0.36
TCHP-201ENST00000312777 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
TCHP-201ENST00000312777 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
TCHP-201ENST00000312777 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
TCHP-201ENST00000312777 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
TCHP-201ENST00000312777 CFTRP13569 1480 aa17.2■□□□□ 0.34
TCHP-201ENST00000312777 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
TCHP-201ENST00000312777 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
TCHP-201ENST00000312777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
TCHP-201ENST00000312777 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
TCHP-201ENST00000312777 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
TCHP-201ENST00000312777 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.33
TCHP-201ENST00000312777 CCER1Q8TC90 406 aaPredicted RBP17.08■□□□□ 0.32
TCHP-201ENST00000312777 DIEXFQ68CQ4 756 aaKnown RBP17.07■□□□□ 0.32
TCHP-201ENST00000312777 TTBK1Q5TCY1 1321 aaPredicted RBP17.03■□□□□ 0.32
TCHP-201ENST00000312777 EEA1Q15075 1411 aa17.02■□□□□ 0.32
TCHP-201ENST00000312777 CUX1P39880 1505 aa17.01■□□□□ 0.31
TCHP-201ENST00000312777 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
TCHP-201ENST00000312777 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
TCHP-201ENST00000312777 KIF21BO75037 1637 aa16.96■□□□□ 0.31
TCHP-201ENST00000312777 SOGA1O94964 1423 aa16.93■□□□□ 0.3
TCHP-201ENST00000312777 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.3
TCHP-201ENST00000312777 WDR97A6NE52 1622 aa16.83■□□□□ 0.29
TCHP-201ENST00000312777 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
TCHP-201ENST00000312777 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
TCHP-201ENST00000312777 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
TCHP-201ENST00000312777 KIF21AQ7Z4S6 1674 aa16.77■□□□□ 0.28
TCHP-201ENST00000312777 NESP48681 1621 aa16.75■□□□□ 0.27
TCHP-201ENST00000312777 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
TCHP-201ENST00000312777 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
TCHP-201ENST00000312777 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
TCHP-201ENST00000312777 TNIKQ9UKE5 1360 aa16.73■□□□□ 0.27
TCHP-201ENST00000312777 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
TCHP-201ENST00000312777 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
TCHP-201ENST00000312777 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
TCHP-201ENST00000312777 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
TCHP-201ENST00000312777 MIER1Q8N108 512 aa16.67■□□□□ 0.26
TCHP-201ENST00000312777 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
TCHP-201ENST00000312777 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
TCHP-201ENST00000312777 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
TCHP-201ENST00000312777 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
TCHP-201ENST00000312777 TARBP1Q13395 1621 aaKnown RBP16.61■□□□□ 0.25
TCHP-201ENST00000312777 ZNF316A6NFI3 1004 aaPredicted RBP16.61■□□□□ 0.25
TCHP-201ENST00000312777 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
TCHP-201ENST00000312777 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
TCHP-201ENST00000312777 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
TCHP-201ENST00000312777 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
TCHP-201ENST00000312777 BCL11AQ9H165 835 aa16.58■□□□□ 0.24
TCHP-201ENST00000312777 CUL7Q14999 1698 aa16.56■□□□□ 0.24
TCHP-201ENST00000312777 WDR62O43379 1518 aa16.54■□□□□ 0.24
TCHP-201ENST00000312777 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
TCHP-201ENST00000312777 IGF1RP08069 1367 aa16.5■□□□□ 0.23
TCHP-201ENST00000312777 UBTFP17480 764 aaKnown RBP16.5■□□□□ 0.23
TCHP-201ENST00000312777 CUX2O14529 1486 aa16.5■□□□□ 0.23
TCHP-201ENST00000312777 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms