RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 NISCHQ9Y2I1 1504 aa17.27■□□□□ 0.36
GFM1-202ENST00000312756 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
GFM1-202ENST00000312756 AEBP2Q6ZN18 517 aaPredicted RBP15.14■□□□□ 0.01
GFM1-202ENST00000312756 CCDC180Q9P1Z9 1646 aa15.09■□□□□ 0.01
GFM1-202ENST00000312756 ABCC9O60706 1549 aa14.6□□□□□ -0.07
GFM1-202ENST00000312756 ZCCHC6Q5VYS8 1495 aaKnown RBP14.47□□□□□ -0.09
GFM1-202ENST00000312756 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
GFM1-202ENST00000312756 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
GFM1-202ENST00000312756 DCAF1Q9Y4B6 1507 aa14.19□□□□□ -0.14
GFM1-202ENST00000312756 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
GFM1-202ENST00000312756 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
GFM1-202ENST00000312756 NACADO15069 1562 aa14.09□□□□□ -0.15
GFM1-202ENST00000312756 RB1CC1Q8TDY2 1594 aa14.07□□□□□ -0.16
GFM1-202ENST00000312756 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
GFM1-202ENST00000312756 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
GFM1-202ENST00000312756 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
GFM1-202ENST00000312756 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
GFM1-202ENST00000312756 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
GFM1-202ENST00000312756 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
GFM1-202ENST00000312756 MYT1Q01538 1121 aa13.69□□□□□ -0.22
GFM1-202ENST00000312756 PELP1Q8IZL8 1130 aaKnown RBP13.69□□□□□ -0.22
GFM1-202ENST00000312756 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
GFM1-202ENST00000312756 CECR2Q9BXF3 1484 aa13.51□□□□□ -0.25
GFM1-202ENST00000312756 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
GFM1-202ENST00000312756 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.25
GFM1-202ENST00000312756 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
GFM1-202ENST00000312756 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
GFM1-202ENST00000312756 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
GFM1-202ENST00000312756 SMARCA4P51532 1647 aa13.33□□□□□ -0.28
GFM1-202ENST00000312756 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
GFM1-202ENST00000312756 WIZO95785 1651 aa13.3□□□□□ -0.28
GFM1-202ENST00000312756 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
GFM1-202ENST00000312756 KCNA4P22459 653 aa13.27□□□□□ -0.29
GFM1-202ENST00000312756 DNAJC5BQ9UF47 199 aa13.24□□□□□ -0.29
GFM1-202ENST00000312756 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
GFM1-202ENST00000312756 CC2D2AQ9P2K1 1620 aa13.2□□□□□ -0.3
GFM1-202ENST00000312756 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
GFM1-202ENST00000312756 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
GFM1-202ENST00000312756 SMARCA2P51531 1590 aa13.08□□□□□ -0.32
GFM1-202ENST00000312756 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
GFM1-202ENST00000312756 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
GFM1-202ENST00000312756 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
GFM1-202ENST00000312756 NCAPD3P42695 1498 aa13.01□□□□□ -0.33
GFM1-202ENST00000312756 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
GFM1-202ENST00000312756 CCDC88BA6NC98 1476 aa12.98□□□□□ -0.33
GFM1-202ENST00000312756 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
GFM1-202ENST00000312756 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
GFM1-202ENST00000312756 NESP48681 1621 aa12.74□□□□□ -0.37
GFM1-202ENST00000312756 PRKCSHP14314 528 aaPredicted RBP12.72□□□□□ -0.37
GFM1-202ENST00000312756 APLP2Q06481 763 aa12.72□□□□□ -0.37
GFM1-202ENST00000312756 ERICH6Q7L0X2 663 aa12.71□□□□□ -0.37
GFM1-202ENST00000312756 ABCC8Q09428 1581 aa12.71□□□□□ -0.37
GFM1-202ENST00000312756 CFTRP13569 1480 aa12.7□□□□□ -0.38
GFM1-202ENST00000312756 CADPSQ9ULU8 1353 aa12.69□□□□□ -0.38
GFM1-202ENST00000312756 ADRA2BP18089 450 aa12.68□□□□□ -0.38
GFM1-202ENST00000312756 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
GFM1-202ENST00000312756 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
GFM1-202ENST00000312756 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
GFM1-202ENST00000312756 FANCD2Q9BXW9 1451 aa12.58□□□□□ -0.4
GFM1-202ENST00000312756 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
GFM1-202ENST00000312756 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
GFM1-202ENST00000312756 WRNQ14191 1432 aaPredicted RBP eCLIP12.56□□□□□ -0.4
GFM1-202ENST00000312756 ERCC6Q03468 1493 aa12.56□□□□□ -0.4
GFM1-202ENST00000312756 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
GFM1-202ENST00000312756 SENP3Q9H4L4 574 aaPredicted RBP12.54□□□□□ -0.4
GFM1-202ENST00000312756 CUX1P39880 1505 aa12.52□□□□□ -0.4
GFM1-202ENST00000312756 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
GFM1-202ENST00000312756 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
GFM1-202ENST00000312756 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
GFM1-202ENST00000312756 TOP2BQ02880 1626 aa12.47□□□□□ -0.41
GFM1-202ENST00000312756 FAM9AQ8IZU1 332 aaPredicted RBP12.47□□□□□ -0.41
GFM1-202ENST00000312756 BIVM-ERCC5R4GMW8 1640 aa12.46□□□□□ -0.41
GFM1-202ENST00000312756 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
GFM1-202ENST00000312756 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
GFM1-202ENST00000312756 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
GFM1-202ENST00000312756 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
GFM1-202ENST00000312756 SOGA1O94964 1423 aa12.42□□□□□ -0.42
GFM1-202ENST00000312756 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
GFM1-202ENST00000312756 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
GFM1-202ENST00000312756 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
GFM1-202ENST00000312756 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
GFM1-202ENST00000312756 WDR62O43379 1518 aa12.37□□□□□ -0.43
GFM1-202ENST00000312756 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
GFM1-202ENST00000312756 LOC105371045A0A1W2PR82 267 aa12.33□□□□□ -0.43
GFM1-202ENST00000312756 CUX2O14529 1486 aa12.32□□□□□ -0.44
GFM1-202ENST00000312756 ZBTB22O15209 634 aa12.27□□□□□ -0.45
GFM1-202ENST00000312756 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
GFM1-202ENST00000312756 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
GFM1-202ENST00000312756 TDRD9Q8NDG6 1382 aaKnown RBP12.25□□□□□ -0.45
GFM1-202ENST00000312756 ABCA10Q8WWZ4 1543 aa12.24□□□□□ -0.45
GFM1-202ENST00000312756 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
GFM1-202ENST00000312756 ZNF608Q9ULD9 1512 aaPredicted RBP12.22□□□□□ -0.45
GFM1-202ENST00000312756 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.46
GFM1-202ENST00000312756 EEA1Q15075 1411 aa12.2□□□□□ -0.46
GFM1-202ENST00000312756 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
GFM1-202ENST00000312756 ABCA5Q8WWZ7 1642 aa12.18□□□□□ -0.46
GFM1-202ENST00000312756 IGF1RP08069 1367 aa12.17□□□□□ -0.46
GFM1-202ENST00000312756 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
GFM1-202ENST00000312756 PPP6R1Q9UPN7 881 aa12.16□□□□□ -0.46
GFM1-202ENST00000312756 RAPGEF2Q9Y4G8 1499 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms