RNA–Protein interactions for RNA: ENST00000312373.12

RUNDC3B-201, Transcript of RUN domain containing 3B, humanhuman

TSL 5

Gene RUNDC3B, Length 3,254 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-201ENST00000312373 NISCHQ9Y2I1 1504 aa9.87□□□□□ -0.83
RUNDC3B-201ENST00000312373 POTEDQ86YR6 584 aa8.4□□□□□ -1.06
RUNDC3B-201ENST00000312373 CCDC180Q9P1Z9 1646 aa8.4□□□□□ -1.06
RUNDC3B-201ENST00000312373 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
RUNDC3B-201ENST00000312373 ZCCHC6Q5VYS8 1495 aaKnown RBP8.35□□□□□ -1.07
RUNDC3B-201ENST00000312373 AEBP2Q6ZN18 517 aaPredicted RBP8.34□□□□□ -1.08
RUNDC3B-201ENST00000312373 SUPT5HO00267 1087 aaKnown RBP8.21□□□□□ -1.1
RUNDC3B-201ENST00000312373 DCAF8L2P0C7V8 631 aa8.15□□□□□ -1.11
RUNDC3B-201ENST00000312373 DCAF1Q9Y4B6 1507 aa8.1□□□□□ -1.11
RUNDC3B-201ENST00000312373 CHIC1Q5VXU3 224 aa7.99□□□□□ -1.13
RUNDC3B-201ENST00000312373 MYO15BQ96JP2 1530 aa7.97□□□□□ -1.13
RUNDC3B-201ENST00000312373 ABCC9O60706 1549 aa7.87□□□□□ -1.15
RUNDC3B-201ENST00000312373 SCRIBQ14160 1630 aa7.86□□□□□ -1.15
RUNDC3B-201ENST00000312373 RSF1Q96T23 1441 aaPredicted RBP7.81□□□□□ -1.16
RUNDC3B-201ENST00000312373 NACADO15069 1562 aa7.77□□□□□ -1.17
RUNDC3B-201ENST00000312373 LOC105371045A0A1W2PR82 267 aa7.75□□□□□ -1.17
RUNDC3B-201ENST00000312373 RB1CC1Q8TDY2 1594 aa7.72□□□□□ -1.17
RUNDC3B-201ENST00000312373 CECR2Q9BXF3 1484 aa7.71□□□□□ -1.18
RUNDC3B-201ENST00000312373 HRCP23327 699 aa7.7□□□□□ -1.18
RUNDC3B-201ENST00000312373 PCGF6Q9BYE7 350 aa7.7□□□□□ -1.18
RUNDC3B-201ENST00000312373 MROH2BQ7Z745 1585 aa7.68□□□□□ -1.18
RUNDC3B-201ENST00000312373 TRIM41Q8WV44 630 aa7.64□□□□□ -1.19
RUNDC3B-201ENST00000312373 WIZO95785 1651 aa7.63□□□□□ -1.19
RUNDC3B-201ENST00000312373 BAZ1AQ9NRL2 1556 aaPredicted RBP7.58□□□□□ -1.2
RUNDC3B-201ENST00000312373 FAM9AQ8IZU1 332 aaPredicted RBP7.58□□□□□ -1.2
RUNDC3B-201ENST00000312373 TRIM26Q12899 539 aaPredicted RBP7.56□□□□□ -1.2
RUNDC3B-201ENST00000312373 PPARGC1BQ86YN6 1023 aaKnown RBP7.55□□□□□ -1.2
RUNDC3B-201ENST00000312373 EIF4G1Q04637 1599 aaKnown RBP7.54□□□□□ -1.2
RUNDC3B-201ENST00000312373 UNC13AQ9UPW8 1703 aa7.54□□□□□ -1.2
RUNDC3B-201ENST00000312373 SMARCA4P51532 1647 aa7.52□□□□□ -1.21
RUNDC3B-201ENST00000312373 TOP2AP11388 1531 aaKnown RBP7.51□□□□□ -1.21
RUNDC3B-201ENST00000312373 EHMT2Q96KQ7 1210 aa7.51□□□□□ -1.21
RUNDC3B-201ENST00000312373 CCDC88BA6NC98 1476 aa7.48□□□□□ -1.21
RUNDC3B-201ENST00000312373 SMARCA2P51531 1590 aa7.48□□□□□ -1.21
RUNDC3B-201ENST00000312373 ABCC8Q09428 1581 aa7.45□□□□□ -1.22
RUNDC3B-201ENST00000312373 BICRAQ9NZM4 1560 aa7.45□□□□□ -1.22
RUNDC3B-201ENST00000312373 PABPN1Q86U42 306 aaKnown RBP eCLIP7.44□□□□□ -1.22
RUNDC3B-201ENST00000312373 PEG3Q9GZU2 1588 aa7.38□□□□□ -1.23
RUNDC3B-201ENST00000312373 SOGA1O94964 1423 aa7.38□□□□□ -1.23
RUNDC3B-201ENST00000312373 ZEB1P37275 1124 aaPredicted RBP7.38□□□□□ -1.23
RUNDC3B-201ENST00000312373 RUSC2Q8N2Y8 1516 aa7.35□□□□□ -1.23
RUNDC3B-201ENST00000312373 ATAD2BQ9ULI0 1458 aa7.34□□□□□ -1.24
RUNDC3B-201ENST00000312373 EEA1Q15075 1411 aa7.33□□□□□ -1.24
RUNDC3B-201ENST00000312373 CEP162Q5TB80 1403 aa7.33□□□□□ -1.24
RUNDC3B-201ENST00000312373 CSRNP3Q8WYN3 585 aa7.33□□□□□ -1.24
RUNDC3B-201ENST00000312373 WRNQ14191 1432 aaPredicted RBP eCLIP7.33□□□□□ -1.24
RUNDC3B-201ENST00000312373 TNIKQ9UKE5 1360 aa7.32□□□□□ -1.24
RUNDC3B-201ENST00000312373 BAZ1BQ9UIG0 1483 aaKnown RBP7.3□□□□□ -1.24
RUNDC3B-201ENST00000312373 SYNJ1O43426 1573 aa7.3□□□□□ -1.24
RUNDC3B-201ENST00000312373 GOLGA3Q08378 1498 aa7.28□□□□□ -1.24
RUNDC3B-201ENST00000312373 UBTFP17480 764 aaKnown RBP7.28□□□□□ -1.24
RUNDC3B-201ENST00000312373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.27□□□□□ -1.25
RUNDC3B-201ENST00000312373 TTBK1Q5TCY1 1321 aaPredicted RBP7.26□□□□□ -1.25
RUNDC3B-201ENST00000312373 CEP164Q9UPV0 1460 aa7.24□□□□□ -1.25
RUNDC3B-201ENST00000312373 KIF21BO75037 1637 aa7.24□□□□□ -1.25
RUNDC3B-201ENST00000312373 CCER1Q8TC90 406 aaPredicted RBP7.23□□□□□ -1.25
RUNDC3B-201ENST00000312373 TOP2BQ02880 1626 aa7.21□□□□□ -1.26
RUNDC3B-201ENST00000312373 RAPGEF2Q9Y4G8 1499 aa7.2□□□□□ -1.26
RUNDC3B-201ENST00000312373 CLIP1P30622 1438 aa7.2□□□□□ -1.26
RUNDC3B-201ENST00000312373 NCAPD3P42695 1498 aa7.19□□□□□ -1.26
RUNDC3B-201ENST00000312373 HMGXB3Q12766 1538 aa7.19□□□□□ -1.26
RUNDC3B-201ENST00000312373 BIVM-ERCC5R4GMW8 1640 aa7.18□□□□□ -1.26
RUNDC3B-201ENST00000312373 VPS8Q8N3P4 1428 aa7.17□□□□□ -1.26
RUNDC3B-201ENST00000312373 CUX1P39880 1505 aa7.15□□□□□ -1.27
RUNDC3B-201ENST00000312373 PRXQ9BXM0 1461 aa7.14□□□□□ -1.27
RUNDC3B-201ENST00000312373 RANGAP1P46060 587 aaPredicted RBP7.13□□□□□ -1.27
RUNDC3B-201ENST00000312373 CFTRP13569 1480 aa7.13□□□□□ -1.27
RUNDC3B-201ENST00000312373 ERICH3Q5RHP9 1530 aa7.13□□□□□ -1.27
RUNDC3B-201ENST00000312373 HNRNPUL2Q1KMD3 747 aaKnown RBP7.11□□□□□ -1.27
RUNDC3B-201ENST00000312373 ARAP1Q96P48 1450 aa7.1□□□□□ -1.27
RUNDC3B-201ENST00000312373 APLP2Q06481 763 aa7.1□□□□□ -1.27
RUNDC3B-201ENST00000312373 KIF27Q86VH2 1401 aa7.1□□□□□ -1.27
RUNDC3B-201ENST00000312373 DIEXFQ68CQ4 756 aaKnown RBP7.09□□□□□ -1.28
RUNDC3B-201ENST00000312373 SENP3Q9H4L4 574 aaPredicted RBP7.09□□□□□ -1.28
RUNDC3B-201ENST00000312373 SCAF1Q9H7N4 1312 aaKnown RBP7.08□□□□□ -1.28
RUNDC3B-201ENST00000312373 PRDM2Q13029 1718 aa7.06□□□□□ -1.28
RUNDC3B-201ENST00000312373 KANK4Q5T7N3 995 aaPredicted RBP7.05□□□□□ -1.28
RUNDC3B-201ENST00000312373 CADPSQ9ULU8 1353 aa7.05□□□□□ -1.28
RUNDC3B-201ENST00000312373 ZNF316A6NFI3 1004 aaPredicted RBP7.05□□□□□ -1.28
RUNDC3B-201ENST00000312373 CUX2O14529 1486 aa7.04□□□□□ -1.28
RUNDC3B-201ENST00000312373 ARHGAP35Q9NRY4 1499 aa7.04□□□□□ -1.28
RUNDC3B-201ENST00000312373 IGF1RP08069 1367 aa7.03□□□□□ -1.28
RUNDC3B-201ENST00000312373 ACIN1Q9UKV3 1341 aaKnown RBP7.02□□□□□ -1.29
RUNDC3B-201ENST00000312373 FGD5Q6ZNL6 1462 aa7.02□□□□□ -1.29
RUNDC3B-201ENST00000312373 NEUROD1Q13562 356 aa7.02□□□□□ -1.29
RUNDC3B-201ENST00000312373 CC2D2AQ9P2K1 1620 aa7.02□□□□□ -1.29
RUNDC3B-201ENST00000312373 RRBP1Q9P2E9 1410 aaKnown RBP7□□□□□ -1.29
RUNDC3B-201ENST00000312373 CARMIL1Q5VZK9 1371 aa6.99□□□□□ -1.29
RUNDC3B-201ENST00000312373 DHX57Q6P158 1386 aaKnown RBP6.99□□□□□ -1.29
RUNDC3B-201ENST00000312373 FANCD2Q9BXW9 1451 aa6.98□□□□□ -1.29
RUNDC3B-201ENST00000312373 PHF23Q9BUL5 403 aaPredicted RBP6.97□□□□□ -1.29
RUNDC3B-201ENST00000312373 CLSPNQ9HAW4 1339 aa6.97□□□□□ -1.29
RUNDC3B-201ENST00000312373 CCNB3Q8WWL7 1395 aa6.97□□□□□ -1.29
RUNDC3B-201ENST00000312373 CENPBP07199 599 aaPredicted RBP6.96□□□□□ -1.3
RUNDC3B-201ENST00000312373 RAD54L2Q9Y4B4 1467 aa6.95□□□□□ -1.3
RUNDC3B-201ENST00000312373 TIAM1Q13009 1591 aa6.95□□□□□ -1.3
RUNDC3B-201ENST00000312373 DNMBPQ6XZF7 1577 aa6.95□□□□□ -1.3
RUNDC3B-201ENST00000312373 MIER1Q8N108 512 aa6.95□□□□□ -1.3
RUNDC3B-201ENST00000312373 NESP48681 1621 aa6.95□□□□□ -1.3
RUNDC3B-201ENST00000312373 MAP3K1Q13233 1512 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms