RNA–Protein interactions for RNA: ENST00000288548.5

KLHL29-201, Transcript of kelch like family member 29, humanhuman

TSL 1 (best)

Gene KLHL29, Length 3,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL29-201ENST00000288548 NISCHQ9Y2I1 1504 aa25.72■■□□□ 1.71
KLHL29-201ENST00000288548 CCDC180Q9P1Z9 1646 aa21.97■■□□□ 1.11
KLHL29-201ENST00000288548 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
KLHL29-201ENST00000288548 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
KLHL29-201ENST00000288548 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
KLHL29-201ENST00000288548 DCAF8L2P0C7V8 631 aa21.21■□□□□ 0.99
KLHL29-201ENST00000288548 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
KLHL29-201ENST00000288548 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
KLHL29-201ENST00000288548 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
KLHL29-201ENST00000288548 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
KLHL29-201ENST00000288548 ABCC9O60706 1549 aa20.54■□□□□ 0.88
KLHL29-201ENST00000288548 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
KLHL29-201ENST00000288548 NACADO15069 1562 aa20.27■□□□□ 0.84
KLHL29-201ENST00000288548 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.82
KLHL29-201ENST00000288548 CECR2Q9BXF3 1484 aa20.08■□□□□ 0.8
KLHL29-201ENST00000288548 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
KLHL29-201ENST00000288548 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
KLHL29-201ENST00000288548 WIZO95785 1651 aa19.93■□□□□ 0.78
KLHL29-201ENST00000288548 PCGF6Q9BYE7 350 aa19.89■□□□□ 0.78
KLHL29-201ENST00000288548 HRCP23327 699 aa19.84■□□□□ 0.77
KLHL29-201ENST00000288548 UNC13AQ9UPW8 1703 aa19.81■□□□□ 0.76
KLHL29-201ENST00000288548 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
KLHL29-201ENST00000288548 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
KLHL29-201ENST00000288548 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
KLHL29-201ENST00000288548 FAM9AQ8IZU1 332 aaPredicted RBP19.68■□□□□ 0.74
KLHL29-201ENST00000288548 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
KLHL29-201ENST00000288548 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
KLHL29-201ENST00000288548 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
KLHL29-201ENST00000288548 TRIM26Q12899 539 aaPredicted RBP19.53■□□□□ 0.72
KLHL29-201ENST00000288548 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
KLHL29-201ENST00000288548 PPARGC1BQ86YN6 1023 aaKnown RBP19.5■□□□□ 0.71
KLHL29-201ENST00000288548 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
KLHL29-201ENST00000288548 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
KLHL29-201ENST00000288548 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
KLHL29-201ENST00000288548 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
KLHL29-201ENST00000288548 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
KLHL29-201ENST00000288548 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
KLHL29-201ENST00000288548 SOGA1O94964 1423 aa19.18■□□□□ 0.66
KLHL29-201ENST00000288548 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
KLHL29-201ENST00000288548 MYT1Q01538 1121 aa19.13■□□□□ 0.65
KLHL29-201ENST00000288548 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
KLHL29-201ENST00000288548 BAZ1BQ9UIG0 1483 aaKnown RBP19.05■□□□□ 0.64
KLHL29-201ENST00000288548 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
KLHL29-201ENST00000288548 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
KLHL29-201ENST00000288548 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
KLHL29-201ENST00000288548 EEA1Q15075 1411 aa19.01■□□□□ 0.63
KLHL29-201ENST00000288548 ZEB1P37275 1124 aaPredicted RBP19■□□□□ 0.63
KLHL29-201ENST00000288548 TNIKQ9UKE5 1360 aa18.98■□□□□ 0.63
KLHL29-201ENST00000288548 CSRNP3Q8WYN3 585 aa18.98■□□□□ 0.63
KLHL29-201ENST00000288548 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
KLHL29-201ENST00000288548 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
KLHL29-201ENST00000288548 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
KLHL29-201ENST00000288548 TTBK1Q5TCY1 1321 aaPredicted RBP18.88■□□□□ 0.61
KLHL29-201ENST00000288548 KIF21BO75037 1637 aa18.85■□□□□ 0.61
KLHL29-201ENST00000288548 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
KLHL29-201ENST00000288548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
KLHL29-201ENST00000288548 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
KLHL29-201ENST00000288548 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
KLHL29-201ENST00000288548 BIVM-ERCC5R4GMW8 1640 aa18.76■□□□□ 0.59
KLHL29-201ENST00000288548 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
KLHL29-201ENST00000288548 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
KLHL29-201ENST00000288548 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
KLHL29-201ENST00000288548 CLIP1P30622 1438 aa18.68■□□□□ 0.58
KLHL29-201ENST00000288548 CUX1P39880 1505 aa18.65■□□□□ 0.58
KLHL29-201ENST00000288548 VPS8Q8N3P4 1428 aa18.6■□□□□ 0.57
KLHL29-201ENST00000288548 CFTRP13569 1480 aa18.57■□□□□ 0.56
KLHL29-201ENST00000288548 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
KLHL29-201ENST00000288548 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
KLHL29-201ENST00000288548 PRXQ9BXM0 1461 aa18.54■□□□□ 0.56
KLHL29-201ENST00000288548 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
KLHL29-201ENST00000288548 ARAP1Q96P48 1450 aa18.46■□□□□ 0.55
KLHL29-201ENST00000288548 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
KLHL29-201ENST00000288548 HNRNPUL2Q1KMD3 747 aaKnown RBP18.43■□□□□ 0.54
KLHL29-201ENST00000288548 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
KLHL29-201ENST00000288548 APLP2Q06481 763 aa18.38■□□□□ 0.53
KLHL29-201ENST00000288548 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
KLHL29-201ENST00000288548 CUX2O14529 1486 aa18.32■□□□□ 0.52
KLHL29-201ENST00000288548 FGD5Q6ZNL6 1462 aa18.3■□□□□ 0.52
KLHL29-201ENST00000288548 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
KLHL29-201ENST00000288548 KANK4Q5T7N3 995 aaPredicted RBP18.29■□□□□ 0.52
KLHL29-201ENST00000288548 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
KLHL29-201ENST00000288548 IGF1RP08069 1367 aa18.27■□□□□ 0.51
KLHL29-201ENST00000288548 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
KLHL29-201ENST00000288548 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
KLHL29-201ENST00000288548 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
KLHL29-201ENST00000288548 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
KLHL29-201ENST00000288548 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
KLHL29-201ENST00000288548 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
KLHL29-201ENST00000288548 NESP48681 1621 aa18.16■□□□□ 0.5
KLHL29-201ENST00000288548 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
KLHL29-201ENST00000288548 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
KLHL29-201ENST00000288548 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
KLHL29-201ENST00000288548 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
KLHL29-201ENST00000288548 DHX57Q6P158 1386 aaKnown RBP18.1■□□□□ 0.49
KLHL29-201ENST00000288548 TIAM1Q13009 1591 aa18.1■□□□□ 0.49
KLHL29-201ENST00000288548 POLA1P09884 1462 aaPredicted RBP18.09■□□□□ 0.49
KLHL29-201ENST00000288548 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
KLHL29-201ENST00000288548 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
KLHL29-201ENST00000288548 BCL11AQ9H165 835 aa18.04■□□□□ 0.48
KLHL29-201ENST00000288548 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms