RNA–Protein interactions for RNA: ENST00000264888.5

CXCL9-201, Transcript of C-X-C motif chemokine ligand 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL9, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL9-201ENST00000264888 CHIC1Q5VXU3 224 aa11.99□□□□□ -0.49
CXCL9-201ENST00000264888 AEBP2Q6ZN18 517 aaPredicted RBP11.88□□□□□ -0.51
CXCL9-201ENST00000264888 NISCHQ9Y2I1 1504 aa11.52□□□□□ -0.57
CXCL9-201ENST00000264888 PHF23Q9BUL5 403 aaPredicted RBP10.86□□□□□ -0.67
CXCL9-201ENST00000264888 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
CXCL9-201ENST00000264888 EHMT2Q96KQ7 1210 aa10.05□□□□□ -0.8
CXCL9-201ENST00000264888 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
CXCL9-201ENST00000264888 MYO15BQ96JP2 1530 aa9.76□□□□□ -0.85
CXCL9-201ENST00000264888 KCNA4P22459 653 aa9.76□□□□□ -0.85
CXCL9-201ENST00000264888 DCAF1Q9Y4B6 1507 aa9.74□□□□□ -0.85
CXCL9-201ENST00000264888 POTEDQ86YR6 584 aa9.74□□□□□ -0.85
CXCL9-201ENST00000264888 ADRA2BP18089 450 aa9.73□□□□□ -0.85
CXCL9-201ENST00000264888 ZCCHC6Q5VYS8 1495 aaKnown RBP9.68□□□□□ -0.86
CXCL9-201ENST00000264888 SENP3Q9H4L4 574 aaPredicted RBP9.61□□□□□ -0.87
CXCL9-201ENST00000264888 NACADO15069 1562 aa9.61□□□□□ -0.87
CXCL9-201ENST00000264888 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
CXCL9-201ENST00000264888 ABCC9O60706 1549 aa9.53□□□□□ -0.88
CXCL9-201ENST00000264888 RB1CC1Q8TDY2 1594 aa9.51□□□□□ -0.89
CXCL9-201ENST00000264888 CSRNP3Q8WYN3 585 aa9.49□□□□□ -0.89
CXCL9-201ENST00000264888 PPP6R1Q9UPN7 881 aa9.45□□□□□ -0.9
CXCL9-201ENST00000264888 SHROOM4Q9ULL8 1493 aa9.44□□□□□ -0.9
CXCL9-201ENST00000264888 UNC13AQ9UPW8 1703 aa9.4□□□□□ -0.91
CXCL9-201ENST00000264888 SLC4A1APQ9BWU0 796 aaKnown RBP9.25□□□□□ -0.93
CXCL9-201ENST00000264888 BICRAQ9NZM4 1560 aa9.22□□□□□ -0.93
CXCL9-201ENST00000264888 SCRIBQ14160 1630 aa9.15□□□□□ -0.94
CXCL9-201ENST00000264888 RTN4Q9NQC3 1192 aaKnown RBP9.11□□□□□ -0.95
CXCL9-201ENST00000264888 ZBTB22O15209 634 aa9.08□□□□□ -0.96
CXCL9-201ENST00000264888 FOXD1Q16676 465 aa9.08□□□□□ -0.96
CXCL9-201ENST00000264888 PPP4R3CPQ6ZMV5 832 aa8.99□□□□□ -0.97
CXCL9-201ENST00000264888 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
CXCL9-201ENST00000264888 PEG3Q9GZU2 1588 aa8.98□□□□□ -0.97
CXCL9-201ENST00000264888 BAZ1AQ9NRL2 1556 aaPredicted RBP8.94□□□□□ -0.98
CXCL9-201ENST00000264888 SMARCA4P51532 1647 aa8.92□□□□□ -0.98
CXCL9-201ENST00000264888 EIF4G1Q04637 1599 aaKnown RBP8.92□□□□□ -0.98
CXCL9-201ENST00000264888 NPM3O75607 178 aaKnown RBP8.89□□□□□ -0.99
CXCL9-201ENST00000264888 SMARCA2P51531 1590 aa8.86□□□□□ -0.99
CXCL9-201ENST00000264888 HMGXB3Q12766 1538 aa8.85□□□□□ -0.99
CXCL9-201ENST00000264888 CC2D2AQ9P2K1 1620 aa8.84□□□□□ -0.99
CXCL9-201ENST00000264888 NCAPD3P42695 1498 aa8.8□□□□□ -1
CXCL9-201ENST00000264888 CECR2Q9BXF3 1484 aa8.8□□□□□ -1
CXCL9-201ENST00000264888 MROH2BQ7Z745 1585 aa8.79□□□□□ -1
CXCL9-201ENST00000264888 PABPN1Q86U42 306 aaKnown RBP eCLIP8.79□□□□□ -1
CXCL9-201ENST00000264888 SUPT5HO00267 1087 aaKnown RBP8.78□□□□□ -1
CXCL9-201ENST00000264888 ATAD2BQ9ULI0 1458 aa8.77□□□□□ -1.01
CXCL9-201ENST00000264888 RSF1Q96T23 1441 aaPredicted RBP8.76□□□□□ -1.01
CXCL9-201ENST00000264888 PELP1Q8IZL8 1130 aaKnown RBP8.74□□□□□ -1.01
CXCL9-201ENST00000264888 TOP2AP11388 1531 aaKnown RBP8.74□□□□□ -1.01
CXCL9-201ENST00000264888 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
CXCL9-201ENST00000264888 WIZO95785 1651 aa8.71□□□□□ -1.01
CXCL9-201ENST00000264888 NCBP3Q53F19 620 aaKnown RBP8.7□□□□□ -1.02
CXCL9-201ENST00000264888 PIAS4Q8N2W9 510 aaPredicted RBP8.7□□□□□ -1.02
CXCL9-201ENST00000264888 PRDM2Q13029 1718 aa8.67□□□□□ -1.02
CXCL9-201ENST00000264888 BAZ1BQ9UIG0 1483 aaKnown RBP8.66□□□□□ -1.02
CXCL9-201ENST00000264888 MYT1Q01538 1121 aa8.65□□□□□ -1.02
CXCL9-201ENST00000264888 HRCP23327 699 aa8.63□□□□□ -1.03
CXCL9-201ENST00000264888 PRKCSHP14314 528 aaPredicted RBP8.62□□□□□ -1.03
CXCL9-201ENST00000264888 DNAJC5BQ9UF47 199 aa8.59□□□□□ -1.03
CXCL9-201ENST00000264888 LAMC3Q9Y6N6 1575 aa8.58□□□□□ -1.04
CXCL9-201ENST00000264888 FOXD4L1Q9NU39 408 aa8.54□□□□□ -1.04
CXCL9-201ENST00000264888 CCDC88BA6NC98 1476 aa8.52□□□□□ -1.05
CXCL9-201ENST00000264888 CFTRP13569 1480 aa8.52□□□□□ -1.05
CXCL9-201ENST00000264888 FKBP8Q14318 412 aa8.51□□□□□ -1.05
CXCL9-201ENST00000264888 DAXXQ9UER7 740 aaPredicted RBP8.51□□□□□ -1.05
CXCL9-201ENST00000264888 TTBK1Q5TCY1 1321 aaPredicted RBP8.5□□□□□ -1.05
CXCL9-201ENST00000264888 CUX2O14529 1486 aa8.48□□□□□ -1.05
CXCL9-201ENST00000264888 THOC2Q8NI27 1593 aaKnown RBP8.48□□□□□ -1.05
CXCL9-201ENST00000264888 CADPSQ9ULU8 1353 aa8.46□□□□□ -1.06
CXCL9-201ENST00000264888 CNKSR2Q8WXI2 1034 aa8.45□□□□□ -1.06
CXCL9-201ENST00000264888 APLP2Q06481 763 aa8.44□□□□□ -1.06
CXCL9-201ENST00000264888 MAPK8IP2Q13387 824 aaPredicted RBP8.43□□□□□ -1.06
CXCL9-201ENST00000264888 KIF21AQ7Z4S6 1674 aa8.41□□□□□ -1.06
CXCL9-201ENST00000264888 WDR97A6NE52 1622 aa8.4□□□□□ -1.06
CXCL9-201ENST00000264888 WDR62O43379 1518 aa8.39□□□□□ -1.07
CXCL9-201ENST00000264888 BIVM-ERCC5R4GMW8 1640 aa8.39□□□□□ -1.07
CXCL9-201ENST00000264888 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
CXCL9-201ENST00000264888 PDS5BQ9NTI5 1447 aa8.39□□□□□ -1.07
CXCL9-201ENST00000264888 ERICH6Q7L0X2 663 aa8.37□□□□□ -1.07
CXCL9-201ENST00000264888 DNMBPQ6XZF7 1577 aa8.35□□□□□ -1.07
CXCL9-201ENST00000264888 FANCD2Q9BXW9 1451 aa8.34□□□□□ -1.07
CXCL9-201ENST00000264888 PCGF6Q9BYE7 350 aa8.34□□□□□ -1.07
CXCL9-201ENST00000264888 CEP164Q9UPV0 1460 aa8.34□□□□□ -1.08
CXCL9-201ENST00000264888 MRC2Q9UBG0 1479 aa8.33□□□□□ -1.08
CXCL9-201ENST00000264888 NESP48681 1621 aa8.33□□□□□ -1.08
CXCL9-201ENST00000264888 TOP2BQ02880 1626 aa8.33□□□□□ -1.08
CXCL9-201ENST00000264888 LOC105371045A0A1W2PR82 267 aa8.31□□□□□ -1.08
CXCL9-201ENST00000264888 SLC4A2P04920 1241 aa8.29□□□□□ -1.08
CXCL9-201ENST00000264888 URB2Q14146 1524 aaKnown RBP8.28□□□□□ -1.08
CXCL9-201ENST00000264888 PPARGC1BQ86YN6 1023 aaKnown RBP8.27□□□□□ -1.09
CXCL9-201ENST00000264888 CUX1P39880 1505 aa8.27□□□□□ -1.09
CXCL9-201ENST00000264888 TOPBP1Q92547 1522 aa8.27□□□□□ -1.09
CXCL9-201ENST00000264888 TARBP1Q13395 1621 aaKnown RBP8.25□□□□□ -1.09
CXCL9-201ENST00000264888 SYNJ1O43426 1573 aa8.25□□□□□ -1.09
CXCL9-201ENST00000264888 WRNQ14191 1432 aaPredicted RBP eCLIP8.22□□□□□ -1.09
CXCL9-201ENST00000264888 ERCC6Q03468 1493 aa8.21□□□□□ -1.09
CXCL9-201ENST00000264888 IFT140Q96RY7 1462 aa8.21□□□□□ -1.1
CXCL9-201ENST00000264888 ABCA5Q8WWZ7 1642 aa8.21□□□□□ -1.1
CXCL9-201ENST00000264888 ABCA10Q8WWZ4 1543 aa8.21□□□□□ -1.1
CXCL9-201ENST00000264888 POLA1P09884 1462 aaPredicted RBP8.19□□□□□ -1.1
CXCL9-201ENST00000264888 ZEB1P37275 1124 aaPredicted RBP8.18□□□□□ -1.1
CXCL9-201ENST00000264888 FGD5Q6ZNL6 1462 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms