RNA–Protein interactions for RNA: ENST00000264546.10

FRMD4A-201, Transcript of FERM domain containing 4A, humanhuman

APPRIS ALT2 TSL 2

Gene FRMD4A, Length 2,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-201ENST00000264546 NISCHQ9Y2I1 1504 aa32.18■■■□□ 2.74
FRMD4A-201ENST00000264546 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
FRMD4A-201ENST00000264546 ABCC9O60706 1549 aa27.24■■□□□ 1.95
FRMD4A-201ENST00000264546 DCAF8L2P0C7V8 631 aa27.05■■□□□ 1.92
FRMD4A-201ENST00000264546 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
FRMD4A-201ENST00000264546 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
FRMD4A-201ENST00000264546 NACADO15069 1562 aa26.35■■□□□ 1.81
FRMD4A-201ENST00000264546 PELP1Q8IZL8 1130 aaKnown RBP26.35■■□□□ 1.81
FRMD4A-201ENST00000264546 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
FRMD4A-201ENST00000264546 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
FRMD4A-201ENST00000264546 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
FRMD4A-201ENST00000264546 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
FRMD4A-201ENST00000264546 HRCP23327 699 aa25.87■■□□□ 1.73
FRMD4A-201ENST00000264546 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
FRMD4A-201ENST00000264546 MYT1Q01538 1121 aa25.71■■□□□ 1.71
FRMD4A-201ENST00000264546 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
FRMD4A-201ENST00000264546 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
FRMD4A-201ENST00000264546 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
FRMD4A-201ENST00000264546 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
FRMD4A-201ENST00000264546 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
FRMD4A-201ENST00000264546 BAZ1AQ9NRL2 1556 aaPredicted RBP24.86■■□□□ 1.57
FRMD4A-201ENST00000264546 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
FRMD4A-201ENST00000264546 SMARCA4P51532 1647 aa24.81■■□□□ 1.56
FRMD4A-201ENST00000264546 PPARGC1BQ86YN6 1023 aaKnown RBP24.8■■□□□ 1.56
FRMD4A-201ENST00000264546 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
FRMD4A-201ENST00000264546 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
FRMD4A-201ENST00000264546 WIZO95785 1651 aa24.68■■□□□ 1.54
FRMD4A-201ENST00000264546 SCAF1Q9H7N4 1312 aaKnown RBP24.61■■□□□ 1.53
FRMD4A-201ENST00000264546 CC2D2AQ9P2K1 1620 aa24.55■■□□□ 1.52
FRMD4A-201ENST00000264546 ATAD2BQ9ULI0 1458 aa24.54■■□□□ 1.52
FRMD4A-201ENST00000264546 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
FRMD4A-201ENST00000264546 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
FRMD4A-201ENST00000264546 PEG3Q9GZU2 1588 aa24.44■■□□□ 1.5
FRMD4A-201ENST00000264546 BAZ1BQ9UIG0 1483 aaKnown RBP24.41■■□□□ 1.5
FRMD4A-201ENST00000264546 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
FRMD4A-201ENST00000264546 ZEB1P37275 1124 aaPredicted RBP24.4■■□□□ 1.5
FRMD4A-201ENST00000264546 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
FRMD4A-201ENST00000264546 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
FRMD4A-201ENST00000264546 HMGXB3Q12766 1538 aa24.24■■□□□ 1.47
FRMD4A-201ENST00000264546 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
FRMD4A-201ENST00000264546 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
FRMD4A-201ENST00000264546 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
FRMD4A-201ENST00000264546 ACIN1Q9UKV3 1341 aaKnown RBP24.02■■□□□ 1.44
FRMD4A-201ENST00000264546 NESP48681 1621 aa23.77■■□□□ 1.4
FRMD4A-201ENST00000264546 CADPSQ9ULU8 1353 aa23.77■■□□□ 1.4
FRMD4A-201ENST00000264546 CENPBP07199 599 aaPredicted RBP23.77■■□□□ 1.4
FRMD4A-201ENST00000264546 CFTRP13569 1480 aa23.72■■□□□ 1.39
FRMD4A-201ENST00000264546 NEUROD1Q13562 356 aa23.7■■□□□ 1.38
FRMD4A-201ENST00000264546 GTF3C3Q9Y5Q9 886 aa23.67■■□□□ 1.38
FRMD4A-201ENST00000264546 LAMC3Q9Y6N6 1575 aa23.59■■□□□ 1.37
FRMD4A-201ENST00000264546 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
FRMD4A-201ENST00000264546 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
FRMD4A-201ENST00000264546 TRIM41Q8WV44 630 aa23.48■■□□□ 1.35
FRMD4A-201ENST00000264546 PDS5BQ9NTI5 1447 aa23.48■■□□□ 1.35
FRMD4A-201ENST00000264546 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
FRMD4A-201ENST00000264546 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
FRMD4A-201ENST00000264546 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
FRMD4A-201ENST00000264546 KIF21AQ7Z4S6 1674 aa23.39■■□□□ 1.34
FRMD4A-201ENST00000264546 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
FRMD4A-201ENST00000264546 LOC105371045A0A1W2PR82 267 aa23.32■■□□□ 1.32
FRMD4A-201ENST00000264546 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
FRMD4A-201ENST00000264546 BCL11AQ9H165 835 aa23.3■■□□□ 1.32
FRMD4A-201ENST00000264546 CUX1P39880 1505 aa23.29■■□□□ 1.32
FRMD4A-201ENST00000264546 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
FRMD4A-201ENST00000264546 TOPBP1Q92547 1522 aa23.2■■□□□ 1.3
FRMD4A-201ENST00000264546 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
FRMD4A-201ENST00000264546 DIEXFQ68CQ4 756 aaKnown RBP23.18■■□□□ 1.3
FRMD4A-201ENST00000264546 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
FRMD4A-201ENST00000264546 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
FRMD4A-201ENST00000264546 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
FRMD4A-201ENST00000264546 BIVM-ERCC5R4GMW8 1640 aa23.14■■□□□ 1.3
FRMD4A-201ENST00000264546 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
FRMD4A-201ENST00000264546 THOC2Q8NI27 1593 aaKnown RBP23.07■■□□□ 1.28
FRMD4A-201ENST00000264546 POLA1P09884 1462 aaPredicted RBP23.06■■□□□ 1.28
FRMD4A-201ENST00000264546 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
FRMD4A-201ENST00000264546 ANP32EQ9BTT0 268 aa23.05■■□□□ 1.28
FRMD4A-201ENST00000264546 SOGA1O94964 1423 aa23.05■■□□□ 1.28
FRMD4A-201ENST00000264546 WDR62O43379 1518 aa23.04■■□□□ 1.28
FRMD4A-201ENST00000264546 CLSPNQ9HAW4 1339 aa23.02■■□□□ 1.28
FRMD4A-201ENST00000264546 RUSC2Q8N2Y8 1516 aa23■■□□□ 1.27
FRMD4A-201ENST00000264546 EHMT2Q96KQ7 1210 aa22.97■■□□□ 1.27
FRMD4A-201ENST00000264546 CUX2O14529 1486 aa22.93■■□□□ 1.26
FRMD4A-201ENST00000264546 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
FRMD4A-201ENST00000264546 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
FRMD4A-201ENST00000264546 ABCA10Q8WWZ4 1543 aa22.84■■□□□ 1.25
FRMD4A-201ENST00000264546 TARBP1Q13395 1621 aaKnown RBP22.84■■□□□ 1.25
FRMD4A-201ENST00000264546 IFT140Q96RY7 1462 aa22.83■■□□□ 1.24
FRMD4A-201ENST00000264546 CSRNP3Q8WYN3 585 aa22.82■■□□□ 1.24
FRMD4A-201ENST00000264546 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
FRMD4A-201ENST00000264546 PRKCSHP14314 528 aaPredicted RBP22.81■■□□□ 1.24
FRMD4A-201ENST00000264546 ERICH6Q7L0X2 663 aa22.81■■□□□ 1.24
FRMD4A-201ENST00000264546 CCER1Q8TC90 406 aaPredicted RBP22.81■■□□□ 1.24
FRMD4A-201ENST00000264546 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.24
FRMD4A-201ENST00000264546 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
FRMD4A-201ENST00000264546 EEA1Q15075 1411 aa22.75■■□□□ 1.23
FRMD4A-201ENST00000264546 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
FRMD4A-201ENST00000264546 IGF1RP08069 1367 aa22.71■■□□□ 1.23
FRMD4A-201ENST00000264546 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
FRMD4A-201ENST00000264546 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
FRMD4A-201ENST00000264546 EIF4G3O43432 1585 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms