RNA–Protein interactions for RNA: ENSMUST00000228434.1

Col20a1-205, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS P2 BASIC

Gene Col20a1, Length 5,012 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-205ENSMUST00000228434 Rhox8Q6VSS7 320 aa23.31■■□□□ 1.32
Col20a1-205ENSMUST00000228434 Rpgrip1Q9EPQ2 1331 aa21.5■■□□□ 1.03
Col20a1-205ENSMUST00000228434 NischQ80TM9 1593 aa21.18■□□□□ 0.98
Col20a1-205ENSMUST00000228434 Ehmt2Q9Z148 1263 aaKnown RBP20.92■□□□□ 0.94
Col20a1-205ENSMUST00000228434 Ccdc136Q3TVA9 1136 aa20.85■□□□□ 0.93
Col20a1-205ENSMUST00000228434 Trim41Q5NCC3 630 aa20.49■□□□□ 0.87
Col20a1-205ENSMUST00000228434 Cngb1E1AZ71 1325 aa20.49■□□□□ 0.87
Col20a1-205ENSMUST00000228434 Esf1Q3V1V3 845 aaKnown RBP20.44■□□□□ 0.86
Col20a1-205ENSMUST00000228434 Gab3Q8BSM5 595 aa20.29■□□□□ 0.84
Col20a1-205ENSMUST00000228434 Las1lA2BE28 776 aaKnown RBP20.23■□□□□ 0.83
Col20a1-205ENSMUST00000228434 Wdr66E9Q743 1299 aa20.16■□□□□ 0.82
Col20a1-205ENSMUST00000228434 Acin1Q9JIX8 1338 aaKnown RBP20.12■□□□□ 0.81
Col20a1-205ENSMUST00000228434 Zeb1Q64318 1117 aa20.11■□□□□ 0.81
Col20a1-205ENSMUST00000228434 Ccdc180J3QNE4 1664 aa20.06■□□□□ 0.8
Col20a1-205ENSMUST00000228434 Npm2Q80W85 207 aa19.97■□□□□ 0.79
Col20a1-205ENSMUST00000228434 HrcG5E8J6 738 aa19.94■□□□□ 0.78
Col20a1-205ENSMUST00000228434 Rtl1Q7M732 1744 aa19.9■□□□□ 0.78
Col20a1-205ENSMUST00000228434 Abcc9P70170 1546 aa19.89■□□□□ 0.77
Col20a1-205ENSMUST00000228434 Myt1lP97500 1187 aa19.86■□□□□ 0.77
Col20a1-205ENSMUST00000228434 NefmP08553 848 aa19.79■□□□□ 0.76
Col20a1-205ENSMUST00000228434 Ube2uB1AUC4 352 aa19.79■□□□□ 0.76
Col20a1-205ENSMUST00000228434 UbtfP25976 765 aaKnown RBP19.6■□□□□ 0.73
Col20a1-205ENSMUST00000228434 Pelp1Q9DBD5 1123 aaKnown RBP19.53■□□□□ 0.72
Col20a1-205ENSMUST00000228434 Zcchc6Q5BLK4 1491 aaKnown RBP19.45■□□□□ 0.7
Col20a1-205ENSMUST00000228434 Abcc8B2RUS7 1588 aa19.42■□□□□ 0.7
Col20a1-205ENSMUST00000228434 Pcgf6Q99NA9 353 aa19.38■□□□□ 0.69
Col20a1-205ENSMUST00000228434 CenpbP27790 599 aa19.33■□□□□ 0.68
Col20a1-205ENSMUST00000228434 Stra8P70278 393 aa19.25■□□□□ 0.67
Col20a1-205ENSMUST00000228434 Il27Q8K3I6 234 aa19.18■□□□□ 0.66
Col20a1-205ENSMUST00000228434 Cdk11bP24788 784 aaKnown RBP19.15■□□□□ 0.66
Col20a1-205ENSMUST00000228434 Gm35339A0A140LHH9 1649 aa19.06■□□□□ 0.64
Col20a1-205ENSMUST00000228434 Supt5hO55201 1082 aaKnown RBP19.01■□□□□ 0.63
Col20a1-205ENSMUST00000228434 Nop58Q6DFW4 536 aaKnown RBP18.97■□□□□ 0.63
Col20a1-205ENSMUST00000228434 Slc24a1Q91WD8 1130 aa18.97■□□□□ 0.63
Col20a1-205ENSMUST00000228434 Mier1Q5UAK0 511 aa18.92■□□□□ 0.62
Col20a1-205ENSMUST00000228434 Fam50aQ9WV03 339 aaKnown RBP18.92■□□□□ 0.62
Col20a1-205ENSMUST00000228434 Ap3b1Q9Z1T1 1105 aa18.92■□□□□ 0.62
Col20a1-205ENSMUST00000228434 TonslQ6NZL6 1363 aa18.87■□□□□ 0.61
Col20a1-205ENSMUST00000228434 NclP09405 707 aaKnown RBP18.84■□□□□ 0.61
Col20a1-205ENSMUST00000228434 Tnnt3Q9QZ47 272 aa18.84■□□□□ 0.61
Col20a1-205ENSMUST00000228434 Ppargc1bQ8VHJ7 1014 aa18.77■□□□□ 0.6
Col20a1-205ENSMUST00000228434 Dcaf1Q80TR8 1506 aa18.75■□□□□ 0.59
Col20a1-205ENSMUST00000228434 NrdcQ8BHG1 1161 aa18.71■□□□□ 0.59
Col20a1-205ENSMUST00000228434 Cep164Q5DU05 1446 aa18.7■□□□□ 0.58
Col20a1-205ENSMUST00000228434 Brd4Q9ESU6 1400 aaKnown RBP18.68■□□□□ 0.58
Col20a1-205ENSMUST00000228434 Myt1Q8CFC2 1127 aa18.67■□□□□ 0.58
Col20a1-205ENSMUST00000228434 Neurod1Q60867 357 aa18.66■□□□□ 0.58
Col20a1-205ENSMUST00000228434 Anp32bQ9EST5 272 aaKnown RBP18.63■□□□□ 0.57
Col20a1-205ENSMUST00000228434 Rb1cc1Q9ESK9 1588 aa18.62■□□□□ 0.57
Col20a1-205ENSMUST00000228434 Plekhg3Q4VAC9 1341 aa18.6■□□□□ 0.57
Col20a1-205ENSMUST00000228434 ClspnQ80YR7 1315 aa18.6■□□□□ 0.57
Col20a1-205ENSMUST00000228434 Chic1Q8CBW7 227 aa18.56■□□□□ 0.56
Col20a1-205ENSMUST00000228434 Npm1Q61937 292 aaKnown RBP18.51■□□□□ 0.55
Col20a1-205ENSMUST00000228434 Amer1Q7TS75 1132 aa18.51■□□□□ 0.55
Col20a1-205ENSMUST00000228434 Eif5bQ05D44 1216 aaKnown RBP18.47■□□□□ 0.55
Col20a1-205ENSMUST00000228434 Lmod2Q3UHZ5 550 aa18.47■□□□□ 0.55
Col20a1-205ENSMUST00000228434 NeflP08551 543 aa18.43■□□□□ 0.54
Col20a1-205ENSMUST00000228434 Clip1Q922J3 1391 aa18.41■□□□□ 0.54
Col20a1-205ENSMUST00000228434 Sall2Q9QX96 1004 aa18.39■□□□□ 0.53
Col20a1-205ENSMUST00000228434 Os9Q8K2C7 672 aa18.33■□□□□ 0.52
Col20a1-205ENSMUST00000228434 Eid3Q3V124 375 aa18.29■□□□□ 0.52
Col20a1-205ENSMUST00000228434 NacadQ5SWP3 1504 aa18.28■□□□□ 0.52
Col20a1-205ENSMUST00000228434 Baz1aO88379 1555 aa18.25■□□□□ 0.51
Col20a1-205ENSMUST00000228434 Rtl5Q5DTT4 599 aa18.25■□□□□ 0.51
Col20a1-205ENSMUST00000228434 Anks4bQ8K3X6 423 aa18.25■□□□□ 0.51
Col20a1-205ENSMUST00000228434 Ttbk1Q6PCN3 1308 aa18.25■□□□□ 0.51
Col20a1-205ENSMUST00000228434 4933416C03RikQ3V063 378 aa18.19■□□□□ 0.5
Col20a1-205ENSMUST00000228434 Ccer2J3QPU5 274 aa18.18■□□□□ 0.5
Col20a1-205ENSMUST00000228434 Anp32aO35381 247 aa18.15■□□□□ 0.5
Col20a1-205ENSMUST00000228434 Mapk8ip2Q9ERE9 830 aa18.13■□□□□ 0.49
Col20a1-205ENSMUST00000228434 Golga3P55937 1487 aa18.11■□□□□ 0.49
Col20a1-205ENSMUST00000228434 Zbtb7cQ8VCZ7 619 aa18.1■□□□□ 0.49
Col20a1-205ENSMUST00000228434 Hnrnpul2Q00PI9 745 aaKnown RBP18.05■□□□□ 0.48
Col20a1-205ENSMUST00000228434 Csrnp3P59055 597 aa18.05■□□□□ 0.48
Col20a1-205ENSMUST00000228434 Aplp2Q06335 707 aa18.01■□□□□ 0.47
Col20a1-205ENSMUST00000228434 BlmO88700 1416 aa17.97■□□□□ 0.47
Col20a1-205ENSMUST00000228434 Ubl4bQ9CQ84 188 aa17.95■□□□□ 0.46
Col20a1-205ENSMUST00000228434 Setd5Q5XJV7 1441 aa17.94■□□□□ 0.46
Col20a1-205ENSMUST00000228434 Gm38655A0A286YDK6 273 aa17.93■□□□□ 0.46
Col20a1-205ENSMUST00000228434 Rsf1E9PWW9 1441 aaKnown RBP17.92■□□□□ 0.46
Col20a1-205ENSMUST00000228434 Kdm5dQ62240 1548 aa17.9■□□□□ 0.46
Col20a1-205ENSMUST00000228434 Zbtb4Q5F293 982 aa17.9■□□□□ 0.46
Col20a1-205ENSMUST00000228434 Hdac5Q9Z2V6 1113 aa17.88■□□□□ 0.45
Col20a1-205ENSMUST00000228434 Chic2Q9D9G3 165 aa17.86■□□□□ 0.45
Col20a1-205ENSMUST00000228434 Erich6D3Z6S9 713 aa17.83■□□□□ 0.45
Col20a1-205ENSMUST00000228434 Aebp2Q9Z248 504 aaKnown RBP17.83■□□□□ 0.45
Col20a1-205ENSMUST00000228434 Calr4Q3TQS0 420 aa17.83■□□□□ 0.44
Col20a1-205ENSMUST00000228434 Fkbp15Q6P9Q6 1216 aaKnown RBP17.81■□□□□ 0.44
Col20a1-205ENSMUST00000228434 Nlrp6Q91WS2 869 aa17.81■□□□□ 0.44
Col20a1-205ENSMUST00000228434 Eea1Q8BL66 1411 aa17.78■□□□□ 0.44
Col20a1-205ENSMUST00000228434 Ifnlr1Q8CGK5 535 aa17.78■□□□□ 0.44
Col20a1-205ENSMUST00000228434 Mrs2Q5NCE8 434 aa17.76■□□□□ 0.43
Col20a1-205ENSMUST00000228434 Kif15Q6P9L6 1387 aa17.76■□□□□ 0.43
Col20a1-205ENSMUST00000228434 DaxxO35613 739 aa17.72■□□□□ 0.43
Col20a1-205ENSMUST00000228434 4930567H17RikQ3V0K5 233 aa17.71■□□□□ 0.43
Col20a1-205ENSMUST00000228434 Upf2A2AT37 1269 aaKnown RBP17.7■□□□□ 0.42
Col20a1-205ENSMUST00000228434 Ppp4r2Q0VGB7 417 aa17.7■□□□□ 0.42
Col20a1-205ENSMUST00000228434 Gm13697A2AK42 830 aa17.67■□□□□ 0.42
Col20a1-205ENSMUST00000228434 Clstn2Q9ER65 966 aa17.67■□□□□ 0.42
Col20a1-205ENSMUST00000228434 Prdm10Q3UTQ7 1184 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms