RNA–Protein interactions for RNA: ENSMUST00000224188.1

Hmgcs1-202, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 BASIC

Gene Hmgcs1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-202ENSMUST00000224188 Gm35339A0A140LHH9 1649 aa16.33■□□□□ 0.2
Hmgcs1-202ENSMUST00000224188 NischQ80TM9 1593 aa16.27■□□□□ 0.2
Hmgcs1-202ENSMUST00000224188 Abcc9P70170 1546 aa15.88■□□□□ 0.13
Hmgcs1-202ENSMUST00000224188 Abcc8B2RUS7 1588 aa15.58■□□□□ 0.08
Hmgcs1-202ENSMUST00000224188 Rpgrip1Q9EPQ2 1331 aa15.45■□□□□ 0.06
Hmgcs1-202ENSMUST00000224188 Rtl1Q7M732 1744 aa14.87□□□□□ -0.03
Hmgcs1-202ENSMUST00000224188 Dcaf1Q80TR8 1506 aa14.65□□□□□ -0.06
Hmgcs1-202ENSMUST00000224188 Ccdc180J3QNE4 1664 aa14.61□□□□□ -0.07
Hmgcs1-202ENSMUST00000224188 ScribQ80U72 1612 aa14.6□□□□□ -0.07
Hmgcs1-202ENSMUST00000224188 Rhox8Q6VSS7 320 aa14.58□□□□□ -0.08
Hmgcs1-202ENSMUST00000224188 Acin1Q9JIX8 1338 aaKnown RBP14.57□□□□□ -0.08
Hmgcs1-202ENSMUST00000224188 Pcgf6Q99NA9 353 aa14.55□□□□□ -0.08
Hmgcs1-202ENSMUST00000224188 Myt1Q8CFC2 1127 aa14.39□□□□□ -0.11
Hmgcs1-202ENSMUST00000224188 Kdm5dQ62240 1548 aa14.25□□□□□ -0.13
Hmgcs1-202ENSMUST00000224188 Rb1cc1Q9ESK9 1588 aa14.22□□□□□ -0.13
Hmgcs1-202ENSMUST00000224188 Trim41Q5NCC3 630 aa14.22□□□□□ -0.13
Hmgcs1-202ENSMUST00000224188 NacadQ5SWP3 1504 aa14.21□□□□□ -0.13
Hmgcs1-202ENSMUST00000224188 Baz1aO88379 1555 aa14.12□□□□□ -0.15
Hmgcs1-202ENSMUST00000224188 Zcchc6Q5BLK4 1491 aaKnown RBP14.09□□□□□ -0.15
Hmgcs1-202ENSMUST00000224188 Ehmt2Q9Z148 1263 aaKnown RBP14.08□□□□□ -0.16
Hmgcs1-202ENSMUST00000224188 Crybg2B7ZCC2 1516 aa14.05□□□□□ -0.16
Hmgcs1-202ENSMUST00000224188 Las1lA2BE28 776 aaKnown RBP14.05□□□□□ -0.16
Hmgcs1-202ENSMUST00000224188 Sycp2Q9CUU3 1500 aa13.91□□□□□ -0.18
Hmgcs1-202ENSMUST00000224188 CenpbP27790 599 aa13.91□□□□□ -0.18
Hmgcs1-202ENSMUST00000224188 Neurod1Q60867 357 aa13.91□□□□□ -0.18
Hmgcs1-202ENSMUST00000224188 Smarca2Q6DIC0 1577 aa13.81□□□□□ -0.2
Hmgcs1-202ENSMUST00000224188 1700123L14RikQ3V2K7 440 aa13.78□□□□□ -0.2
Hmgcs1-202ENSMUST00000224188 DiexfQ8BTT6 772 aaKnown RBP13.77□□□□□ -0.21
Hmgcs1-202ENSMUST00000224188 Supt5hO55201 1082 aaKnown RBP13.69□□□□□ -0.22
Hmgcs1-202ENSMUST00000224188 Anks4bQ8K3X6 423 aa13.69□□□□□ -0.22
Hmgcs1-202ENSMUST00000224188 HrcG5E8J6 738 aa13.63□□□□□ -0.23
Hmgcs1-202ENSMUST00000224188 Aplp2Q06335 707 aa13.63□□□□□ -0.23
Hmgcs1-202ENSMUST00000224188 BicraF8VPZ9 1578 aa13.61□□□□□ -0.23
Hmgcs1-202ENSMUST00000224188 Bcl11aQ9QYE3 773 aa13.57□□□□□ -0.24
Hmgcs1-202ENSMUST00000224188 Ccdc136Q3TVA9 1136 aa13.45□□□□□ -0.26
Hmgcs1-202ENSMUST00000224188 Cngb1E1AZ71 1325 aa13.45□□□□□ -0.26
Hmgcs1-202ENSMUST00000224188 Cecr2E9Q2Z1 1453 aa13.39□□□□□ -0.27
Hmgcs1-202ENSMUST00000224188 Brd4Q9ESU6 1400 aaKnown RBP13.38□□□□□ -0.27
Hmgcs1-202ENSMUST00000224188 Csrnp3P59055 597 aa13.37□□□□□ -0.27
Hmgcs1-202ENSMUST00000224188 Synj1Q8CHC4 1574 aa13.28□□□□□ -0.28
Hmgcs1-202ENSMUST00000224188 Smarca4Q3TKT4 1613 aaKnown RBP13.25□□□□□ -0.29
Hmgcs1-202ENSMUST00000224188 CftrP26361 1476 aa13.25□□□□□ -0.29
Hmgcs1-202ENSMUST00000224188 Zeb1Q64318 1117 aa13.24□□□□□ -0.29
Hmgcs1-202ENSMUST00000224188 Cttnbp2B9EJA2 1648 aa13.23□□□□□ -0.29
Hmgcs1-202ENSMUST00000224188 Cep164Q5DU05 1446 aa13.19□□□□□ -0.3
Hmgcs1-202ENSMUST00000224188 Golga3P55937 1487 aa13.18□□□□□ -0.3
Hmgcs1-202ENSMUST00000224188 Top2bQ64511 1612 aa13.14□□□□□ -0.31
Hmgcs1-202ENSMUST00000224188 NefmP08553 848 aa13.13□□□□□ -0.31
Hmgcs1-202ENSMUST00000224188 Sall2Q9QX96 1004 aa13.11□□□□□ -0.31
Hmgcs1-202ENSMUST00000224188 PrkcshO08795 521 aa13.08□□□□□ -0.32
Hmgcs1-202ENSMUST00000224188 Atad2bE9Q166 1460 aaKnown RBP13.07□□□□□ -0.32
Hmgcs1-202ENSMUST00000224188 Iqgap2Q3UQ44 1575 aa13.06□□□□□ -0.32
Hmgcs1-202ENSMUST00000224188 Rsf1E9PWW9 1441 aaKnown RBP13.03□□□□□ -0.32
Hmgcs1-202ENSMUST00000224188 Pds5bQ4VA53 1446 aaKnown RBP13.03□□□□□ -0.32
Hmgcs1-202ENSMUST00000224188 Amer1Q7TS75 1132 aa12.99□□□□□ -0.33
Hmgcs1-202ENSMUST00000224188 Gab3Q8BSM5 595 aa12.98□□□□□ -0.33
Hmgcs1-202ENSMUST00000224188 Ccdc88bQ4QRL3 1481 aa12.97□□□□□ -0.33
Hmgcs1-202ENSMUST00000224188 Rtl5Q5DTT4 599 aa12.91□□□□□ -0.34
Hmgcs1-202ENSMUST00000224188 Wdr66E9Q743 1299 aa12.91□□□□□ -0.34
Hmgcs1-202ENSMUST00000224188 Cdk11bP24788 784 aaKnown RBP12.91□□□□□ -0.34
Hmgcs1-202ENSMUST00000224188 Chic1Q8CBW7 227 aa12.9□□□□□ -0.34
Hmgcs1-202ENSMUST00000224188 Fmn1Q05860 1466 aa12.9□□□□□ -0.34
Hmgcs1-202ENSMUST00000224188 Cc2d2aQ8CFW7 1633 aa12.89□□□□□ -0.35
Hmgcs1-202ENSMUST00000224188 Wdr62Q3U3T8 1523 aa12.87□□□□□ -0.35
Hmgcs1-202ENSMUST00000224188 Fam71e1A1L3C1 212 aa12.86□□□□□ -0.35
Hmgcs1-202ENSMUST00000224188 TnnQ80Z71 1560 aa12.85□□□□□ -0.35
Hmgcs1-202ENSMUST00000224188 Top2aQ01320 1528 aaKnown RBP12.83□□□□□ -0.36
Hmgcs1-202ENSMUST00000224188 Esf1Q3V1V3 845 aaKnown RBP12.82□□□□□ -0.36
Hmgcs1-202ENSMUST00000224188 Frmpd1A2AKB4 1549 aa12.82□□□□□ -0.36
Hmgcs1-202ENSMUST00000224188 Fgd1P52734 960 aa12.81□□□□□ -0.36
Hmgcs1-202ENSMUST00000224188 Nop58Q6DFW4 536 aaKnown RBP12.79□□□□□ -0.36
Hmgcs1-202ENSMUST00000224188 ClspnQ80YR7 1315 aa12.78□□□□□ -0.36
Hmgcs1-202ENSMUST00000224188 Ppargc1bQ8VHJ7 1014 aa12.78□□□□□ -0.36
Hmgcs1-202ENSMUST00000224188 Ifnlr1Q8CGK5 535 aa12.76□□□□□ -0.37
Hmgcs1-202ENSMUST00000224188 Lamc3Q9R0B6 1581 aa12.74□□□□□ -0.37
Hmgcs1-202ENSMUST00000224188 Rapgef2Q8CHG7 1496 aa12.74□□□□□ -0.37
Hmgcs1-202ENSMUST00000224188 NrdcQ8BHG1 1161 aa12.74□□□□□ -0.37
Hmgcs1-202ENSMUST00000224188 Ercc6F8VPZ5 1481 aa12.73□□□□□ -0.37
Hmgcs1-202ENSMUST00000224188 Thoc2B1AZI6 1594 aaKnown RBP12.72□□□□□ -0.37
Hmgcs1-202ENSMUST00000224188 Unc13aQ4KUS2 1712 aa12.71□□□□□ -0.37
Hmgcs1-202ENSMUST00000224188 Tnnt3Q9QZ47 272 aa12.7□□□□□ -0.38
Hmgcs1-202ENSMUST00000224188 Mier1Q5UAK0 511 aa12.67□□□□□ -0.38
Hmgcs1-202ENSMUST00000224188 Hdac5Q9Z2V6 1113 aa12.67□□□□□ -0.38
Hmgcs1-202ENSMUST00000224188 Eif4g1Q6NZJ6 1600 aaKnown RBP12.65□□□□□ -0.38
Hmgcs1-202ENSMUST00000224188 Gm38655A0A286YDK6 273 aa12.63□□□□□ -0.39
Hmgcs1-202ENSMUST00000224188 UbtfP25976 765 aaKnown RBP12.61□□□□□ -0.39
Hmgcs1-202ENSMUST00000224188 Aebp2Q9Z248 504 aaKnown RBP12.6□□□□□ -0.39
Hmgcs1-202ENSMUST00000224188 Ccdc9Q8VC31 543 aaKnown RBP12.58□□□□□ -0.39
Hmgcs1-202ENSMUST00000224188 Fam135aQ6NS59 1506 aa12.57□□□□□ -0.4
Hmgcs1-202ENSMUST00000224188 Anp32aO35381 247 aa12.57□□□□□ -0.4
Hmgcs1-202ENSMUST00000224188 Cep162Q6ZQ06 1403 aa12.57□□□□□ -0.4
Hmgcs1-202ENSMUST00000224188 CatipB9EKE5 520 aa12.57□□□□□ -0.4
Hmgcs1-202ENSMUST00000224188 Phldb1Q6PDH0 1371 aaKnown RBP12.56□□□□□ -0.4
Hmgcs1-202ENSMUST00000224188 Camsap1A2AHC3 1581 aa12.55□□□□□ -0.4
Hmgcs1-202ENSMUST00000224188 Pknox2Q8BG99 474 aa12.55□□□□□ -0.4
Hmgcs1-202ENSMUST00000224188 NrkQ9R0G8 1455 aa12.54□□□□□ -0.4
Hmgcs1-202ENSMUST00000224188 Baz1bQ9Z277 1479 aa12.52□□□□□ -0.41
Hmgcs1-202ENSMUST00000224188 Kif15Q6P9L6 1387 aa12.5□□□□□ -0.41
Hmgcs1-202ENSMUST00000224188 Hnrnpul2Q00PI9 745 aaKnown RBP12.48□□□□□ -0.41
Hmgcs1-202ENSMUST00000224188 Shroom4Q1W617 1475 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 165.6 ms