RNA–Protein interactions for RNA: ENSMUST00000222028.1

Ptpdc1-204, Transcript of Protein tyrosine phosphatase domain-containing protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ptpdc1, Length 3,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1-204ENSMUST00000222028 NischQ80TM9 1593 aa30.06■■■□□ 2.4
Ptpdc1-204ENSMUST00000222028 Rhox8Q6VSS7 320 aa29.91■■■□□ 2.38
Ptpdc1-204ENSMUST00000222028 Abcc9P70170 1546 aa28.96■■■□□ 2.23
Ptpdc1-204ENSMUST00000222028 Rpgrip1Q9EPQ2 1331 aa28.95■■■□□ 2.22
Ptpdc1-204ENSMUST00000222028 Ehmt2Q9Z148 1263 aaKnown RBP28.84■■■□□ 2.21
Ptpdc1-204ENSMUST00000222028 Ccdc180J3QNE4 1664 aa28.51■■■□□ 2.16
Ptpdc1-204ENSMUST00000222028 Rtl1Q7M732 1744 aa28.51■■■□□ 2.15
Ptpdc1-204ENSMUST00000222028 Acin1Q9JIX8 1338 aaKnown RBP28.41■■■□□ 2.14
Ptpdc1-204ENSMUST00000222028 Gm35339A0A140LHH9 1649 aa28.36■■■□□ 2.13
Ptpdc1-204ENSMUST00000222028 Abcc8B2RUS7 1588 aa28.15■■■□□ 2.1
Ptpdc1-204ENSMUST00000222028 Pcgf6Q99NA9 353 aa28.03■■■□□ 2.08
Ptpdc1-204ENSMUST00000222028 Ccdc136Q3TVA9 1136 aa27.67■■■□□ 2.02
Ptpdc1-204ENSMUST00000222028 Zcchc6Q5BLK4 1491 aaKnown RBP27.62■■■□□ 2.01
Ptpdc1-204ENSMUST00000222028 Supt5hO55201 1082 aaKnown RBP27.44■■□□□ 1.98
Ptpdc1-204ENSMUST00000222028 HrcG5E8J6 738 aa27.4■■□□□ 1.98
Ptpdc1-204ENSMUST00000222028 Dcaf1Q80TR8 1506 aa27.27■■□□□ 1.96
Ptpdc1-204ENSMUST00000222028 Trim41Q5NCC3 630 aa27.17■■□□□ 1.94
Ptpdc1-204ENSMUST00000222028 Neurod1Q60867 357 aa27.06■■□□□ 1.92
Ptpdc1-204ENSMUST00000222028 Zeb1Q64318 1117 aa27.05■■□□□ 1.92
Ptpdc1-204ENSMUST00000222028 Gab3Q8BSM5 595 aa26.65■■□□□ 1.86
Ptpdc1-204ENSMUST00000222028 Cngb1E1AZ71 1325 aa26.62■■□□□ 1.85
Ptpdc1-204ENSMUST00000222028 Las1lA2BE28 776 aaKnown RBP26.46■■□□□ 1.83
Ptpdc1-204ENSMUST00000222028 Sall2Q9QX96 1004 aa26.44■■□□□ 1.82
Ptpdc1-204ENSMUST00000222028 Rb1cc1Q9ESK9 1588 aa26.41■■□□□ 1.82
Ptpdc1-204ENSMUST00000222028 Mier1Q5UAK0 511 aa26.34■■□□□ 1.81
Ptpdc1-204ENSMUST00000222028 Csrnp3P59055 597 aa26.28■■□□□ 1.8
Ptpdc1-204ENSMUST00000222028 Cep164Q5DU05 1446 aa26.26■■□□□ 1.79
Ptpdc1-204ENSMUST00000222028 1700123L14RikQ3V2K7 440 aa26.25■■□□□ 1.79
Ptpdc1-204ENSMUST00000222028 NefmP08553 848 aa26.23■■□□□ 1.79
Ptpdc1-204ENSMUST00000222028 Wdr66E9Q743 1299 aa26.21■■□□□ 1.79
Ptpdc1-204ENSMUST00000222028 Ppargc1bQ8VHJ7 1014 aa26.2■■□□□ 1.79
Ptpdc1-204ENSMUST00000222028 Chic1Q8CBW7 227 aa26.19■■□□□ 1.78
Ptpdc1-204ENSMUST00000222028 Anks4bQ8K3X6 423 aa26.01■■□□□ 1.75
Ptpdc1-204ENSMUST00000222028 Baz1aO88379 1555 aa25.96■■□□□ 1.75
Ptpdc1-204ENSMUST00000222028 Gm38655A0A286YDK6 273 aa25.95■■□□□ 1.74
Ptpdc1-204ENSMUST00000222028 UbtfP25976 765 aaKnown RBP25.92■■□□□ 1.74
Ptpdc1-204ENSMUST00000222028 Aebp2Q9Z248 504 aaKnown RBP25.9■■□□□ 1.74
Ptpdc1-204ENSMUST00000222028 Rsf1E9PWW9 1441 aaKnown RBP25.85■■□□□ 1.73
Ptpdc1-204ENSMUST00000222028 ScribQ80U72 1612 aa25.82■■□□□ 1.72
Ptpdc1-204ENSMUST00000222028 Cdk11bP24788 784 aaKnown RBP25.8■■□□□ 1.72
Ptpdc1-204ENSMUST00000222028 CenpbP27790 599 aa25.79■■□□□ 1.72
Ptpdc1-204ENSMUST00000222028 Nop58Q6DFW4 536 aaKnown RBP25.77■■□□□ 1.72
Ptpdc1-204ENSMUST00000222028 Kdm5dQ62240 1548 aa25.67■■□□□ 1.7
Ptpdc1-204ENSMUST00000222028 Ccdc88bQ4QRL3 1481 aa25.57■■□□□ 1.68
Ptpdc1-204ENSMUST00000222028 Esf1Q3V1V3 845 aaKnown RBP25.51■■□□□ 1.67
Ptpdc1-204ENSMUST00000222028 Aplp2Q06335 707 aa25.5■■□□□ 1.67
Ptpdc1-204ENSMUST00000222028 ClspnQ80YR7 1315 aa25.49■■□□□ 1.67
Ptpdc1-204ENSMUST00000222028 Myt1lP97500 1187 aa25.45■■□□□ 1.66
Ptpdc1-204ENSMUST00000222028 DiexfQ8BTT6 772 aaKnown RBP25.41■■□□□ 1.66
Ptpdc1-204ENSMUST00000222028 Smarca2Q6DIC0 1577 aa25.39■■□□□ 1.65
Ptpdc1-204ENSMUST00000222028 Myt1Q8CFC2 1127 aa25.35■■□□□ 1.65
Ptpdc1-204ENSMUST00000222028 TonslQ6NZL6 1363 aa25.28■■□□□ 1.64
Ptpdc1-204ENSMUST00000222028 NacadQ5SWP3 1504 aa25.23■■□□□ 1.63
Ptpdc1-204ENSMUST00000222028 Mapk8ip2Q9ERE9 830 aa25.19■■□□□ 1.62
Ptpdc1-204ENSMUST00000222028 Golga3P55937 1487 aa25.16■■□□□ 1.62
Ptpdc1-204ENSMUST00000222028 SafbD3YXK2 937 aaKnown RBP25.13■■□□□ 1.61
Ptpdc1-204ENSMUST00000222028 Brd4Q9ESU6 1400 aaKnown RBP25.13■■□□□ 1.61
Ptpdc1-204ENSMUST00000222028 Plekhg3Q4VAC9 1341 aa25.09■■□□□ 1.61
Ptpdc1-204ENSMUST00000222028 Bcl11aQ9QYE3 773 aa25.08■■□□□ 1.61
Ptpdc1-204ENSMUST00000222028 Ap3b1Q9Z1T1 1105 aa25.07■■□□□ 1.6
Ptpdc1-204ENSMUST00000222028 Fam71e1A1L3C1 212 aa25.05■■□□□ 1.6
Ptpdc1-204ENSMUST00000222028 Cecr2E9Q2Z1 1453 aa25.04■■□□□ 1.6
Ptpdc1-204ENSMUST00000222028 Hnrnpul2Q00PI9 745 aaKnown RBP25.03■■□□□ 1.6
Ptpdc1-204ENSMUST00000222028 Eid3Q3V124 375 aa25.01■■□□□ 1.59
Ptpdc1-204ENSMUST00000222028 Npm2Q80W85 207 aa24.99■■□□□ 1.59
Ptpdc1-204ENSMUST00000222028 Crybg2B7ZCC2 1516 aa24.92■■□□□ 1.58
Ptpdc1-204ENSMUST00000222028 Synj1Q8CHC4 1574 aa24.83■■□□□ 1.57
Ptpdc1-204ENSMUST00000222028 Clip1Q922J3 1391 aa24.7■■□□□ 1.54
Ptpdc1-204ENSMUST00000222028 Tnnt3Q9QZ47 272 aa24.67■■□□□ 1.54
Ptpdc1-204ENSMUST00000222028 PrkcshO08795 521 aa24.65■■□□□ 1.54
Ptpdc1-204ENSMUST00000222028 Ifnlr1Q8CGK5 535 aa24.65■■□□□ 1.54
Ptpdc1-204ENSMUST00000222028 Sycp2Q9CUU3 1500 aa24.64■■□□□ 1.54
Ptpdc1-204ENSMUST00000222028 Rapgef2Q8CHG7 1496 aa24.61■■□□□ 1.53
Ptpdc1-204ENSMUST00000222028 Cep162Q6ZQ06 1403 aa24.61■■□□□ 1.53
Ptpdc1-204ENSMUST00000222028 CftrP26361 1476 aa24.55■■□□□ 1.52
Ptpdc1-204ENSMUST00000222028 Slc24a1Q91WD8 1130 aa24.54■■□□□ 1.52
Ptpdc1-204ENSMUST00000222028 Cc2d2aQ8CFW7 1633 aa24.5■■□□□ 1.51
Ptpdc1-204ENSMUST00000222028 NclP09405 707 aaKnown RBP24.46■■□□□ 1.51
Ptpdc1-204ENSMUST00000222028 Anp32aO35381 247 aa24.42■■□□□ 1.5
Ptpdc1-204ENSMUST00000222028 Top2bQ64511 1612 aa24.4■■□□□ 1.5
Ptpdc1-204ENSMUST00000222028 Ncapd3Q6ZQK0 1506 aa24.37■■□□□ 1.49
Ptpdc1-204ENSMUST00000222028 Fam50aQ9WV03 339 aaKnown RBP24.36■■□□□ 1.49
Ptpdc1-204ENSMUST00000222028 Nolc1E9Q5C9 702 aaKnown RBP24.32■■□□□ 1.48
Ptpdc1-204ENSMUST00000222028 Znf710Q3U288 666 aa24.3■■□□□ 1.48
Ptpdc1-204ENSMUST00000222028 Il27Q8K3I6 234 aa24.28■■□□□ 1.48
Ptpdc1-204ENSMUST00000222028 Calr4Q3TQS0 420 aa24.27■■□□□ 1.48
Ptpdc1-204ENSMUST00000222028 Stra8P70278 393 aa24.25■■□□□ 1.47
Ptpdc1-204ENSMUST00000222028 Eif5bQ05D44 1216 aaKnown RBP24.22■■□□□ 1.47
Ptpdc1-204ENSMUST00000222028 Fmn1Q05860 1466 aa24.22■■□□□ 1.47
Ptpdc1-204ENSMUST00000222028 Top2aQ01320 1528 aaKnown RBP24.19■■□□□ 1.46
Ptpdc1-204ENSMUST00000222028 Ttbk1Q6PCN3 1308 aa24.17■■□□□ 1.46
Ptpdc1-204ENSMUST00000222028 Rpap1Q80TE0 1409 aa24.15■■□□□ 1.46
Ptpdc1-204ENSMUST00000222028 Lmod2Q3UHZ5 550 aa24.14■■□□□ 1.45
Ptpdc1-204ENSMUST00000222028 Cttnbp2B9EJA2 1648 aa24.12■■□□□ 1.45
Ptpdc1-204ENSMUST00000222028 Ppp4r2Q0VGB7 417 aa24.09■■□□□ 1.45
Ptpdc1-204ENSMUST00000222028 Ube2uB1AUC4 352 aa24.07■■□□□ 1.44
Ptpdc1-204ENSMUST00000222028 Hspa5P20029 655 aaKnown RBP24.05■■□□□ 1.44
Ptpdc1-204ENSMUST00000222028 Setd5Q5XJV7 1441 aa24.05■■□□□ 1.44
Ptpdc1-204ENSMUST00000222028 BicraF8VPZ9 1578 aa24.03■■□□□ 1.44
Ptpdc1-204ENSMUST00000222028 Supt16hQ920B9 1047 aa24.03■■□□□ 1.44
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms