RNA–Protein interactions for RNA: ENSMUST00000220578.1

Srp54a-202, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54a, Length 4,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54a-202ENSMUST00000220578 Rhox8Q6VSS7 320 aa22.72■■□□□ 1.23
Srp54a-202ENSMUST00000220578 Ccdc136Q3TVA9 1136 aa20.33■□□□□ 0.85
Srp54a-202ENSMUST00000220578 NischQ80TM9 1593 aa20.33■□□□□ 0.84
Srp54a-202ENSMUST00000220578 Esf1Q3V1V3 845 aaKnown RBP20.07■□□□□ 0.8
Srp54a-202ENSMUST00000220578 Ehmt2Q9Z148 1263 aaKnown RBP20.07■□□□□ 0.8
Srp54a-202ENSMUST00000220578 Cngb1E1AZ71 1325 aa19.97■□□□□ 0.79
Srp54a-202ENSMUST00000220578 Trim41Q5NCC3 630 aa19.79■□□□□ 0.76
Srp54a-202ENSMUST00000220578 Gab3Q8BSM5 595 aa19.72■□□□□ 0.75
Srp54a-202ENSMUST00000220578 Rpgrip1Q9EPQ2 1331 aa19.72■□□□□ 0.75
Srp54a-202ENSMUST00000220578 Zeb1Q64318 1117 aa19.55■□□□□ 0.72
Srp54a-202ENSMUST00000220578 Npm2Q80W85 207 aa19.49■□□□□ 0.71
Srp54a-202ENSMUST00000220578 Myt1lP97500 1187 aa19.38■□□□□ 0.69
Srp54a-202ENSMUST00000220578 Ube2uB1AUC4 352 aa19.31■□□□□ 0.68
Srp54a-202ENSMUST00000220578 Wdr66E9Q743 1299 aa19.19■□□□□ 0.66
Srp54a-202ENSMUST00000220578 Las1lA2BE28 776 aaKnown RBP19.17■□□□□ 0.66
Srp54a-202ENSMUST00000220578 Abcc9P70170 1546 aa19.17■□□□□ 0.66
Srp54a-202ENSMUST00000220578 Il27Q8K3I6 234 aa18.98■□□□□ 0.63
Srp54a-202ENSMUST00000220578 Zcchc6Q5BLK4 1491 aaKnown RBP18.9■□□□□ 0.62
Srp54a-202ENSMUST00000220578 Gm35339A0A140LHH9 1649 aa18.89■□□□□ 0.61
Srp54a-202ENSMUST00000220578 UbtfP25976 765 aaKnown RBP18.87■□□□□ 0.61
Srp54a-202ENSMUST00000220578 HrcG5E8J6 738 aa18.8■□□□□ 0.6
Srp54a-202ENSMUST00000220578 Acin1Q9JIX8 1338 aaKnown RBP18.65■□□□□ 0.58
Srp54a-202ENSMUST00000220578 Abcc8B2RUS7 1588 aa18.64■□□□□ 0.57
Srp54a-202ENSMUST00000220578 Ccdc180J3QNE4 1664 aa18.61■□□□□ 0.57
Srp54a-202ENSMUST00000220578 NefmP08553 848 aa18.58■□□□□ 0.56
Srp54a-202ENSMUST00000220578 Ap3b1Q9Z1T1 1105 aa18.47■□□□□ 0.55
Srp54a-202ENSMUST00000220578 Fam50aQ9WV03 339 aaKnown RBP18.36■□□□□ 0.53
Srp54a-202ENSMUST00000220578 Rtl1Q7M732 1744 aa18.33■□□□□ 0.52
Srp54a-202ENSMUST00000220578 Npm1Q61937 292 aaKnown RBP18.25■□□□□ 0.51
Srp54a-202ENSMUST00000220578 Slc24a1Q91WD8 1130 aa18.24■□□□□ 0.51
Srp54a-202ENSMUST00000220578 Neurod1Q60867 357 aa18.15■□□□□ 0.5
Srp54a-202ENSMUST00000220578 Pelp1Q9DBD5 1123 aaKnown RBP18.1■□□□□ 0.49
Srp54a-202ENSMUST00000220578 Stra8P70278 393 aa18.07■□□□□ 0.48
Srp54a-202ENSMUST00000220578 NclP09405 707 aaKnown RBP18.05■□□□□ 0.48
Srp54a-202ENSMUST00000220578 Lmod2Q3UHZ5 550 aa18.05■□□□□ 0.48
Srp54a-202ENSMUST00000220578 Ppargc1bQ8VHJ7 1014 aa18.02■□□□□ 0.48
Srp54a-202ENSMUST00000220578 Plekhg3Q4VAC9 1341 aa17.99■□□□□ 0.47
Srp54a-202ENSMUST00000220578 Brd4Q9ESU6 1400 aaKnown RBP17.95■□□□□ 0.46
Srp54a-202ENSMUST00000220578 Mier1Q5UAK0 511 aa17.93■□□□□ 0.46
Srp54a-202ENSMUST00000220578 Os9Q8K2C7 672 aa17.92■□□□□ 0.46
Srp54a-202ENSMUST00000220578 Cdk11bP24788 784 aaKnown RBP17.91■□□□□ 0.46
Srp54a-202ENSMUST00000220578 Pcgf6Q99NA9 353 aa17.91■□□□□ 0.46
Srp54a-202ENSMUST00000220578 Chic1Q8CBW7 227 aa17.9■□□□□ 0.46
Srp54a-202ENSMUST00000220578 Zbtb7cQ8VCZ7 619 aa17.88■□□□□ 0.45
Srp54a-202ENSMUST00000220578 TonslQ6NZL6 1363 aa17.86■□□□□ 0.45
Srp54a-202ENSMUST00000220578 Rb1cc1Q9ESK9 1588 aa17.84■□□□□ 0.45
Srp54a-202ENSMUST00000220578 NrdcQ8BHG1 1161 aa17.84■□□□□ 0.45
Srp54a-202ENSMUST00000220578 Anp32bQ9EST5 272 aaKnown RBP17.83■□□□□ 0.44
Srp54a-202ENSMUST00000220578 Ifnlr1Q8CGK5 535 aa17.82■□□□□ 0.44
Srp54a-202ENSMUST00000220578 CenpbP27790 599 aa17.82■□□□□ 0.44
Srp54a-202ENSMUST00000220578 Ubl4bQ9CQ84 188 aa17.81■□□□□ 0.44
Srp54a-202ENSMUST00000220578 Nop58Q6DFW4 536 aaKnown RBP17.79■□□□□ 0.44
Srp54a-202ENSMUST00000220578 Hnrnpul2Q00PI9 745 aaKnown RBP17.75■□□□□ 0.43
Srp54a-202ENSMUST00000220578 Supt5hO55201 1082 aaKnown RBP17.74■□□□□ 0.43
Srp54a-202ENSMUST00000220578 Dcaf1Q80TR8 1506 aa17.73■□□□□ 0.43
Srp54a-202ENSMUST00000220578 Fkbp15Q6P9Q6 1216 aaKnown RBP17.72■□□□□ 0.43
Srp54a-202ENSMUST00000220578 NacadQ5SWP3 1504 aa17.68■□□□□ 0.42
Srp54a-202ENSMUST00000220578 Clip1Q922J3 1391 aa17.66■□□□□ 0.42
Srp54a-202ENSMUST00000220578 Cep164Q5DU05 1446 aa17.65■□□□□ 0.42
Srp54a-202ENSMUST00000220578 Eif5bQ05D44 1216 aaKnown RBP17.63■□□□□ 0.41
Srp54a-202ENSMUST00000220578 Eid3Q3V124 375 aa17.63■□□□□ 0.41
Srp54a-202ENSMUST00000220578 Gm13697A2AK42 830 aa17.54■□□□□ 0.4
Srp54a-202ENSMUST00000220578 Zbtb4Q5F293 982 aa17.53■□□□□ 0.4
Srp54a-202ENSMUST00000220578 Tnnt3Q9QZ47 272 aa17.5■□□□□ 0.39
Srp54a-202ENSMUST00000220578 Erich6D3Z6S9 713 aa17.5■□□□□ 0.39
Srp54a-202ENSMUST00000220578 NeflP08551 543 aa17.47■□□□□ 0.39
Srp54a-202ENSMUST00000220578 Mapk8ip2Q9ERE9 830 aa17.44■□□□□ 0.38
Srp54a-202ENSMUST00000220578 Baz1aO88379 1555 aa17.42■□□□□ 0.38
Srp54a-202ENSMUST00000220578 ClspnQ80YR7 1315 aa17.4■□□□□ 0.38
Srp54a-202ENSMUST00000220578 Atp1b4Q99ME6 356 aa17.38■□□□□ 0.37
Srp54a-202ENSMUST00000220578 Kif15Q6P9L6 1387 aa17.37■□□□□ 0.37
Srp54a-202ENSMUST00000220578 Chic2Q9D9G3 165 aa17.36■□□□□ 0.37
Srp54a-202ENSMUST00000220578 Plppr3Q7TPB0 716 aa17.35■□□□□ 0.37
Srp54a-202ENSMUST00000220578 BlmO88700 1416 aa17.33■□□□□ 0.36
Srp54a-202ENSMUST00000220578 Prdm10Q3UTQ7 1184 aa17.33■□□□□ 0.36
Srp54a-202ENSMUST00000220578 Rsf1E9PWW9 1441 aaKnown RBP17.31■□□□□ 0.36
Srp54a-202ENSMUST00000220578 Golga3P55937 1487 aa17.31■□□□□ 0.36
Srp54a-202ENSMUST00000220578 Kdm5dQ62240 1548 aa17.3■□□□□ 0.36
Srp54a-202ENSMUST00000220578 Ccer2J3QPU5 274 aa17.28■□□□□ 0.36
Srp54a-202ENSMUST00000220578 Setd5Q5XJV7 1441 aa17.28■□□□□ 0.36
Srp54a-202ENSMUST00000220578 Amer1Q7TS75 1132 aa17.27■□□□□ 0.36
Srp54a-202ENSMUST00000220578 Gm13695A2AK44 830 aa17.25■□□□□ 0.35
Srp54a-202ENSMUST00000220578 Ttbk1Q6PCN3 1308 aa17.24■□□□□ 0.35
Srp54a-202ENSMUST00000220578 Sall2Q9QX96 1004 aa17.22■□□□□ 0.35
Srp54a-202ENSMUST00000220578 Hdac5Q9Z2V6 1113 aa17.18■□□□□ 0.34
Srp54a-202ENSMUST00000220578 Ercc6F8VPZ5 1481 aa17.17■□□□□ 0.34
Srp54a-202ENSMUST00000220578 Nlrp6Q91WS2 869 aa17.15■□□□□ 0.34
Srp54a-202ENSMUST00000220578 Ccdc18Q640L5 1455 aa17.1■□□□□ 0.33
Srp54a-202ENSMUST00000220578 Clstn2Q9ER65 966 aa17.07■□□□□ 0.32
Srp54a-202ENSMUST00000220578 Arhgap27A2AB59 869 aa17.05■□□□□ 0.32
Srp54a-202ENSMUST00000220578 4933416C03RikQ3V063 378 aa17.03■□□□□ 0.32
Srp54a-202ENSMUST00000220578 Polr3glQ8R0C0 218 aa17.02■□□□□ 0.31
Srp54a-202ENSMUST00000220578 Eea1Q8BL66 1411 aa17.02■□□□□ 0.31
Srp54a-202ENSMUST00000220578 Pds5bQ4VA53 1446 aaKnown RBP16.96■□□□□ 0.31
Srp54a-202ENSMUST00000220578 Rgl3Q3UYI5 709 aa16.96■□□□□ 0.3
Srp54a-202ENSMUST00000220578 Safb2Q80YR5 991 aaKnown RBP16.94■□□□□ 0.3
Srp54a-202ENSMUST00000220578 Mrs2Q5NCE8 434 aa16.92■□□□□ 0.3
Srp54a-202ENSMUST00000220578 Ccdc88bQ4QRL3 1481 aa16.88■□□□□ 0.29
Srp54a-202ENSMUST00000220578 P3h3Q8CG70 732 aa16.87■□□□□ 0.29
Srp54a-202ENSMUST00000220578 Csrnp3P59055 597 aa16.86■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 63.9 ms