RNA–Protein interactions for RNA: ENSMUST00000202179.1

Specc1-213, Transcript of Cytospin-B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Specc1, Length 6,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Specc1-213ENSMUST00000202179 Rhox8Q6VSS7 320 aa20.82■□□□□ 0.92
Specc1-213ENSMUST00000202179 NischQ80TM9 1593 aa20.25■□□□□ 0.83
Specc1-213ENSMUST00000202179 Rpgrip1Q9EPQ2 1331 aa20.19■□□□□ 0.82
Specc1-213ENSMUST00000202179 Abcc9P70170 1546 aa19.27■□□□□ 0.67
Specc1-213ENSMUST00000202179 Ehmt2Q9Z148 1263 aaKnown RBP19.1■□□□□ 0.65
Specc1-213ENSMUST00000202179 Las1lA2BE28 776 aaKnown RBP18.97■□□□□ 0.63
Specc1-213ENSMUST00000202179 Abcc8B2RUS7 1588 aa18.97■□□□□ 0.63
Specc1-213ENSMUST00000202179 Rtl1Q7M732 1744 aa18.92■□□□□ 0.62
Specc1-213ENSMUST00000202179 Gm35339A0A140LHH9 1649 aa18.91■□□□□ 0.62
Specc1-213ENSMUST00000202179 Ccdc180J3QNE4 1664 aa18.9■□□□□ 0.62
Specc1-213ENSMUST00000202179 Acin1Q9JIX8 1338 aaKnown RBP18.84■□□□□ 0.61
Specc1-213ENSMUST00000202179 Ccdc136Q3TVA9 1136 aa18.67■□□□□ 0.58
Specc1-213ENSMUST00000202179 Cngb1E1AZ71 1325 aa18.64■□□□□ 0.58
Specc1-213ENSMUST00000202179 Zeb1Q64318 1117 aa18.44■□□□□ 0.54
Specc1-213ENSMUST00000202179 Trim41Q5NCC3 630 aa18.42■□□□□ 0.54
Specc1-213ENSMUST00000202179 Wdr66E9Q743 1299 aa18.42■□□□□ 0.54
Specc1-213ENSMUST00000202179 HrcG5E8J6 738 aa18.33■□□□□ 0.53
Specc1-213ENSMUST00000202179 Esf1Q3V1V3 845 aaKnown RBP18.28■□□□□ 0.52
Specc1-213ENSMUST00000202179 NefmP08553 848 aa18.24■□□□□ 0.51
Specc1-213ENSMUST00000202179 Gab3Q8BSM5 595 aa18.21■□□□□ 0.51
Specc1-213ENSMUST00000202179 Pcgf6Q99NA9 353 aa18.19■□□□□ 0.5
Specc1-213ENSMUST00000202179 Pelp1Q9DBD5 1123 aaKnown RBP18.11■□□□□ 0.49
Specc1-213ENSMUST00000202179 CenpbP27790 599 aa18.07■□□□□ 0.48
Specc1-213ENSMUST00000202179 Zcchc6Q5BLK4 1491 aaKnown RBP18.03■□□□□ 0.48
Specc1-213ENSMUST00000202179 NacadQ5SWP3 1504 aa17.85■□□□□ 0.45
Specc1-213ENSMUST00000202179 Npm2Q80W85 207 aa17.83■□□□□ 0.45
Specc1-213ENSMUST00000202179 Myt1Q8CFC2 1127 aa17.83■□□□□ 0.44
Specc1-213ENSMUST00000202179 Supt5hO55201 1082 aaKnown RBP17.75■□□□□ 0.43
Specc1-213ENSMUST00000202179 Myt1lP97500 1187 aa17.75■□□□□ 0.43
Specc1-213ENSMUST00000202179 UbtfP25976 765 aaKnown RBP17.74■□□□□ 0.43
Specc1-213ENSMUST00000202179 Cdk11bP24788 784 aaKnown RBP17.73■□□□□ 0.43
Specc1-213ENSMUST00000202179 Rb1cc1Q9ESK9 1588 aa17.72■□□□□ 0.43
Specc1-213ENSMUST00000202179 Dcaf1Q80TR8 1506 aa17.72■□□□□ 0.43
Specc1-213ENSMUST00000202179 Stra8P70278 393 aa17.68■□□□□ 0.42
Specc1-213ENSMUST00000202179 Ube2uB1AUC4 352 aa17.62■□□□□ 0.41
Specc1-213ENSMUST00000202179 Nop58Q6DFW4 536 aaKnown RBP17.54■□□□□ 0.4
Specc1-213ENSMUST00000202179 Kdm5dQ62240 1548 aa17.51■□□□□ 0.39
Specc1-213ENSMUST00000202179 Tnnt3Q9QZ47 272 aa17.5■□□□□ 0.39
Specc1-213ENSMUST00000202179 Baz1aO88379 1555 aa17.48■□□□□ 0.39
Specc1-213ENSMUST00000202179 Brd4Q9ESU6 1400 aaKnown RBP17.44■□□□□ 0.38
Specc1-213ENSMUST00000202179 Mier1Q5UAK0 511 aa17.42■□□□□ 0.38
Specc1-213ENSMUST00000202179 TonslQ6NZL6 1363 aa17.32■□□□□ 0.36
Specc1-213ENSMUST00000202179 Neurod1Q60867 357 aa17.29■□□□□ 0.36
Specc1-213ENSMUST00000202179 Cep164Q5DU05 1446 aa17.28■□□□□ 0.36
Specc1-213ENSMUST00000202179 Il27Q8K3I6 234 aa17.27■□□□□ 0.35
Specc1-213ENSMUST00000202179 ClspnQ80YR7 1315 aa17.24■□□□□ 0.35
Specc1-213ENSMUST00000202179 ScribQ80U72 1612 aa17.24■□□□□ 0.35
Specc1-213ENSMUST00000202179 Slc24a1Q91WD8 1130 aa17.19■□□□□ 0.34
Specc1-213ENSMUST00000202179 Sycp2Q9CUU3 1500 aa17.17■□□□□ 0.34
Specc1-213ENSMUST00000202179 Anks4bQ8K3X6 423 aa17.17■□□□□ 0.34
Specc1-213ENSMUST00000202179 Rtl5Q5DTT4 599 aa17.15■□□□□ 0.34
Specc1-213ENSMUST00000202179 Crybg2B7ZCC2 1516 aa17.14■□□□□ 0.33
Specc1-213ENSMUST00000202179 Amer1Q7TS75 1132 aa17.14■□□□□ 0.33
Specc1-213ENSMUST00000202179 Ppargc1bQ8VHJ7 1014 aa17.12■□□□□ 0.33
Specc1-213ENSMUST00000202179 NclP09405 707 aaKnown RBP17.09■□□□□ 0.33
Specc1-213ENSMUST00000202179 Sall2Q9QX96 1004 aa17.07■□□□□ 0.32
Specc1-213ENSMUST00000202179 Npm1Q61937 292 aaKnown RBP17.06■□□□□ 0.32
Specc1-213ENSMUST00000202179 Aplp2Q06335 707 aa17.01■□□□□ 0.31
Specc1-213ENSMUST00000202179 NrdcQ8BHG1 1161 aa16.99■□□□□ 0.31
Specc1-213ENSMUST00000202179 Fam50aQ9WV03 339 aaKnown RBP16.98■□□□□ 0.31
Specc1-213ENSMUST00000202179 Csrnp3P59055 597 aa16.98■□□□□ 0.31
Specc1-213ENSMUST00000202179 Ap3b1Q9Z1T1 1105 aa16.98■□□□□ 0.31
Specc1-213ENSMUST00000202179 Anp32aO35381 247 aa16.94■□□□□ 0.3
Specc1-213ENSMUST00000202179 Pds5bQ4VA53 1446 aaKnown RBP16.92■□□□□ 0.3
Specc1-213ENSMUST00000202179 DiexfQ8BTT6 772 aaKnown RBP16.9■□□□□ 0.3
Specc1-213ENSMUST00000202179 Ttbk1Q6PCN3 1308 aa16.89■□□□□ 0.29
Specc1-213ENSMUST00000202179 Eif5bQ05D44 1216 aaKnown RBP16.87■□□□□ 0.29
Specc1-213ENSMUST00000202179 Ubl4bQ9CQ84 188 aa16.87■□□□□ 0.29
Specc1-213ENSMUST00000202179 Ercc6F8VPZ5 1481 aa16.86■□□□□ 0.29
Specc1-213ENSMUST00000202179 Chic1Q8CBW7 227 aa16.86■□□□□ 0.29
Specc1-213ENSMUST00000202179 Golga3P55937 1487 aa16.83■□□□□ 0.29
Specc1-213ENSMUST00000202179 NeflP08551 543 aa16.81■□□□□ 0.28
Specc1-213ENSMUST00000202179 4933416C03RikQ3V063 378 aa16.81■□□□□ 0.28
Specc1-213ENSMUST00000202179 Anp32bQ9EST5 272 aaKnown RBP16.81■□□□□ 0.28
Specc1-213ENSMUST00000202179 Plekhg3Q4VAC9 1341 aa16.81■□□□□ 0.28
Specc1-213ENSMUST00000202179 Rsf1E9PWW9 1441 aaKnown RBP16.75■□□□□ 0.27
Specc1-213ENSMUST00000202179 Smarca2Q6DIC0 1577 aa16.72■□□□□ 0.27
Specc1-213ENSMUST00000202179 Clip1Q922J3 1391 aa16.71■□□□□ 0.27
Specc1-213ENSMUST00000202179 Gm38655A0A286YDK6 273 aa16.7■□□□□ 0.26
Specc1-213ENSMUST00000202179 1700123L14RikQ3V2K7 440 aa16.68■□□□□ 0.26
Specc1-213ENSMUST00000202179 Atad2bE9Q166 1460 aaKnown RBP16.64■□□□□ 0.26
Specc1-213ENSMUST00000202179 Kif15Q6P9L6 1387 aa16.64■□□□□ 0.25
Specc1-213ENSMUST00000202179 CftrP26361 1476 aa16.59■□□□□ 0.25
Specc1-213ENSMUST00000202179 Cecr2E9Q2Z1 1453 aa16.56■□□□□ 0.24
Specc1-213ENSMUST00000202179 Eid3Q3V124 375 aa16.55■□□□□ 0.24
Specc1-213ENSMUST00000202179 Ccdc18Q640L5 1455 aa16.53■□□□□ 0.24
Specc1-213ENSMUST00000202179 Ccer2J3QPU5 274 aa16.53■□□□□ 0.24
Specc1-213ENSMUST00000202179 Calr4Q3TQS0 420 aa16.51■□□□□ 0.23
Specc1-213ENSMUST00000202179 Smarca4Q3TKT4 1613 aaKnown RBP16.51■□□□□ 0.23
Specc1-213ENSMUST00000202179 Lmod2Q3UHZ5 550 aa16.51■□□□□ 0.23
Specc1-213ENSMUST00000202179 Aebp2Q9Z248 504 aaKnown RBP16.51■□□□□ 0.23
Specc1-213ENSMUST00000202179 Mapk8ip2Q9ERE9 830 aa16.49■□□□□ 0.23
Specc1-213ENSMUST00000202179 Fmn1Q05860 1466 aa16.43■□□□□ 0.22
Specc1-213ENSMUST00000202179 Phldb1Q6PDH0 1371 aaKnown RBP16.41■□□□□ 0.22
Specc1-213ENSMUST00000202179 Synj1Q8CHC4 1574 aa16.38■□□□□ 0.21
Specc1-213ENSMUST00000202179 Ppp4r2Q0VGB7 417 aa16.36■□□□□ 0.21
Specc1-213ENSMUST00000202179 DaxxO35613 739 aa16.35■□□□□ 0.21
Specc1-213ENSMUST00000202179 Fam71e1A1L3C1 212 aa16.35■□□□□ 0.21
Specc1-213ENSMUST00000202179 Wdr43Q6ZQL4 677 aaKnown RBP16.34■□□□□ 0.21
Specc1-213ENSMUST00000202179 Cttnbp2B9EJA2 1648 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 130.2 ms